RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 ACRBPQ8NEB7 543 aa11.74□□□□□ -0.53
SEMA4D-208ENST00000422704 LSM14BQ9BX40 385 aaKnown RBP11.74□□□□□ -0.53
SEMA4D-208ENST00000422704 NSRP1Q9H0G5 558 aaKnown RBP11.74□□□□□ -0.53
SEMA4D-208ENST00000422704 PCDHB6Q9Y5E3 794 aa11.74□□□□□ -0.53
SEMA4D-208ENST00000422704 NFAT5O94916 1531 aa11.74□□□□□ -0.53
SEMA4D-208ENST00000422704 CARMIL3Q8ND23 1372 aa11.74□□□□□ -0.53
SEMA4D-208ENST00000422704 INPP5BP32019 993 aa11.74□□□□□ -0.53
SEMA4D-208ENST00000422704 SFMBT2Q5VUG0 894 aa11.74□□□□□ -0.53
SEMA4D-208ENST00000422704 BSPRYQ5W0U4 402 aa11.74□□□□□ -0.53
SEMA4D-208ENST00000422704 LCORLQ8N3X6 602 aa11.74□□□□□ -0.53
SEMA4D-208ENST00000422704 EPC1Q9H2F5 836 aa11.74□□□□□ -0.53
SEMA4D-208ENST00000422704 AGTPBP1Q9UPW5 1226 aa11.74□□□□□ -0.53
SEMA4D-208ENST00000422704 MST1RQ04912 1400 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 DCAF8L1A6NGE4 600 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 E7EVH7 732 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 TRAF1Q13077 416 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 NAA25Q14CX7 972 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 DYNLL2Q96FJ2 89 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 PPP1R12CQ9BZL4 782 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 CEP83Q9Y592 693 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 IFT20Q8IY31 132 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 RTEL1Q9NZ71 1219 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 TXNDC16Q9P2K2 825 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 ZMYM6O95789 1325 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 PCCAP05165 728 aaPredicted RBP11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 KRT19P08727 400 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 KIF23Q02241 960 aaPredicted RBP11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 CFAP221Q4G0U5 840 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 CEP85LQ5SZL2 805 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 C6orf163Q5TEZ5 329 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 TACO1Q9BSH4 297 aaKnown RBP11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 ST7Q9NRC1 585 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 ZDHHC9Q9Y397 364 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 SLIT3O75094 1523 aa11.73□□□□□ -0.53
SEMA4D-208ENST00000422704 LOC102724428A0A0B4J2F2 783 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 STAMBPO95630 424 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 IGKV5-2P06315 115 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 SIK1P57059 783 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 RASSF7Q02833 373 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 PABPC4Q13310 644 aaKnown RBP eCLIP11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 TRIM14Q14142 442 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 WDR44Q5JSH3 913 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 PPP1R13BQ96KQ4 1090 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 PSTPIP2Q9H939 334 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 NKIRAS1Q9NYS0 192 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 RCOR1Q9UKL0 485 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 SOS2Q07890 1332 aaPredicted RBP11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 SOWAHDA6NJG2 315 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 TUBBP07437 444 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 DCUN1D2Q6PH85 259 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 USP17L2Q6R6M4 530 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 SMCR8Q8TEV9 937 aaPredicted RBP11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 RBM17Q96I25 401 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 TSGA10Q9BZW7 698 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 UTP11Q9Y3A2 253 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 TTLL3Q9Y4R7 772 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 RPN1P04843 607 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 TNNI1P19237 187 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 LIG3P49916 1009 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 RBM6P78332 1123 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 SPATA1Q5VX52 437 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 TDRD7Q8NHU6 1098 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 BCAS4Q8TDM0 211 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 COA7Q96BR5 231 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 TESPA1A2RU30 521 aaPredicted RBP11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 USP17L8P0C7I0 530 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 PSMC4P43686 418 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 RBL2Q08999 1139 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 PPP2R5CQ13362 524 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 NBPF14Q5TI25 921 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 MYOCDQ8IZQ8 938 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 TMEM87AQ8NBN3 555 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 BAIAP2L1Q9UHR4 511 aa11.72□□□□□ -0.53
SEMA4D-208ENST00000422704 STX10O60499 249 aa11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 FLOT1O75955 427 aa11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 DLATP10515 647 aaKnown RBP11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 GPR161Q8N6U8 529 aaKnown RBP11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 SMC6Q96SB8 1091 aa11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 TUBGCP2Q9BSJ2 902 aa11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 ARMCX3Q9UH62 379 aaPredicted RBP11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 KIAA1024Q9UPX6 916 aa11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 LTN1O94822 1766 aa11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 ERVV-2B6SEH9 535 aa11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 MEIS1O00470 390 aa11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 ACTN4O43707 911 aaKnown RBP11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 XRCC5P13010 732 aaKnown RBP11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 HSPA1LP34931 641 aa11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 SMTNP53814 917 aa11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 NKX1-1Q15270 411 aaPredicted RBP11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 SMIM5Q71RC9 77 aa11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 TSNARE1Q96NA8 513 aa11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 NUP58Q9BVL2 599 aa11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.71□□□□□ -0.53
SEMA4D-208ENST00000422704 TCP10L2B9ZVM9 353 aa11.71□□□□□ -0.54
SEMA4D-208ENST00000422704 ALAS1P13196 640 aa11.71□□□□□ -0.54
SEMA4D-208ENST00000422704 KRT15P19012 456 aa11.71□□□□□ -0.54
SEMA4D-208ENST00000422704 BTDP43251 543 aa11.71□□□□□ -0.54
SEMA4D-208ENST00000422704 GUCY2DQ02846 1103 aa11.71□□□□□ -0.54
SEMA4D-208ENST00000422704 PSMD6Q15008 389 aa11.71□□□□□ -0.54
SEMA4D-208ENST00000422704 KCTD1Q719H9 257 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms