RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 EPHB4P54760 987 aa22.16■■□□□ 1.14
AC004540.1-203ENST00000421862 FAAP100Q0VG06 881 aa22.16■■□□□ 1.14
AC004540.1-203ENST00000421862 ACVR2BQ13705 512 aa22.16■■□□□ 1.14
AC004540.1-203ENST00000421862 SLFN13Q68D06 897 aa22.16■■□□□ 1.14
AC004540.1-203ENST00000421862 FAM161BQ96MY7 647 aa22.16■■□□□ 1.14
AC004540.1-203ENST00000421862 FSD1Q9BTV5 496 aa22.16■■□□□ 1.14
AC004540.1-203ENST00000421862 NAPBQ9H115 298 aa22.16■■□□□ 1.14
AC004540.1-203ENST00000421862 ABHD16BQ9H3Z7 469 aa22.16■■□□□ 1.14
AC004540.1-203ENST00000421862 ZNF536O15090 1300 aa22.15■■□□□ 1.14
AC004540.1-203ENST00000421862 STAT2P52630 851 aa22.15■■□□□ 1.14
AC004540.1-203ENST00000421862 NKX3-2P78367 333 aa22.15■■□□□ 1.14
AC004540.1-203ENST00000421862 ARMCX2Q7L311 632 aa22.15■■□□□ 1.14
AC004540.1-203ENST00000421862 ANKRD35Q8N283 1001 aa22.15■■□□□ 1.14
AC004540.1-203ENST00000421862 TTYH1Q9H313 450 aaPredicted RBP22.15■■□□□ 1.14
AC004540.1-203ENST00000421862 TBX21Q9UL17 535 aa22.15■■□□□ 1.14
AC004540.1-203ENST00000421862 CTDP1Q9Y5B0 961 aaPredicted RBP22.15■■□□□ 1.14
AC004540.1-203ENST00000421862 GBF1Q92538 1859 aa22.15■■□□□ 1.14
AC004540.1-203ENST00000421862 ELP1O95163 1332 aa22.14■■□□□ 1.14
AC004540.1-203ENST00000421862 PRUNE2Q8WUY3 3088 aa22.14■■□□□ 1.14
AC004540.1-203ENST00000421862 TMEM265A0A087WTH1 108 aa22.14■■□□□ 1.13
AC004540.1-203ENST00000421862 PLA2G6O60733 806 aa22.14■■□□□ 1.13
AC004540.1-203ENST00000421862 SLC3A2P08195 630 aaKnown RBP22.14■■□□□ 1.13
AC004540.1-203ENST00000421862 RAG1P15918 1043 aa22.14■■□□□ 1.13
AC004540.1-203ENST00000421862 MX1P20591 662 aa22.14■■□□□ 1.13
AC004540.1-203ENST00000421862 GJA9P57773 515 aa22.14■■□□□ 1.13
AC004540.1-203ENST00000421862 TFAP4Q01664 338 aa22.14■■□□□ 1.13
AC004540.1-203ENST00000421862 KCNA10Q16322 511 aa22.14■■□□□ 1.13
AC004540.1-203ENST00000421862 FAM133AQ8N9E0 248 aa22.14■■□□□ 1.13
AC004540.1-203ENST00000421862 ACAD9Q9H845 621 aa22.14■■□□□ 1.13
AC004540.1-203ENST00000421862 VCANP13611 3396 aa22.14■■□□□ 1.13
AC004540.1-203ENST00000421862 MROH7Q68CQ1 1323 aa22.13■■□□□ 1.13
AC004540.1-203ENST00000421862 TMEM232C9JQI7 657 aa22.13■■□□□ 1.13
AC004540.1-203ENST00000421862 FPGSQ05932 587 aa22.13■■□□□ 1.13
AC004540.1-203ENST00000421862 CCDC144BQ3MJ40 725 aa22.13■■□□□ 1.13
AC004540.1-203ENST00000421862 PPP4R3BQ5MIZ7 849 aa22.13■■□□□ 1.13
AC004540.1-203ENST00000421862 FAM160B2Q86V87 743 aa22.13■■□□□ 1.13
AC004540.1-203ENST00000421862 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.13■■□□□ 1.13
AC004540.1-203ENST00000421862 RNPC3Q96LT9 517 aaKnown RBP22.13■■□□□ 1.13
AC004540.1-203ENST00000421862 CDX2Q99626 313 aaPredicted RBP22.13■■□□□ 1.13
AC004540.1-203ENST00000421862 SEMA6BQ9H3T3 888 aa22.13■■□□□ 1.13
AC004540.1-203ENST00000421862 SPTBN5Q9NRC6 3674 aaKnown RBP22.13■■□□□ 1.13
AC004540.1-203ENST00000421862 DCDC2CA8MYV0 355 aa22.12■■□□□ 1.13
AC004540.1-203ENST00000421862 CTAGE5O15320 804 aa22.12■■□□□ 1.13
AC004540.1-203ENST00000421862 NOVP48745 357 aa22.12■■□□□ 1.13
AC004540.1-203ENST00000421862 SLC4A3P48751 1232 aa22.12■■□□□ 1.13
AC004540.1-203ENST00000421862 CDK7P50613 346 aa22.12■■□□□ 1.13
AC004540.1-203ENST00000421862 IRX5P78411 483 aaPredicted RBP22.12■■□□□ 1.13
AC004540.1-203ENST00000421862 CCDC144CPQ8IYA2 1237 aa22.12■■□□□ 1.13
AC004540.1-203ENST00000421862 PCSK9Q8NBP7 692 aaKnown RBP22.12■■□□□ 1.13
AC004540.1-203ENST00000421862 GLT1D1Q96MS3 346 aa22.12■■□□□ 1.13
AC004540.1-203ENST00000421862 A1CFQ9NQ94 594 aaKnown RBP22.12■■□□□ 1.13
AC004540.1-203ENST00000421862 TMEM39AQ9NV64 488 aa22.12■■□□□ 1.13
AC004540.1-203ENST00000421862 ASGR1P07306 291 aa22.11■■□□□ 1.13
AC004540.1-203ENST00000421862 C6orf222P0C671 652 aaPredicted RBP22.11■■□□□ 1.13
AC004540.1-203ENST00000421862 SLC1A4P43007 532 aa22.11■■□□□ 1.13
AC004540.1-203ENST00000421862 CNTN2Q02246 1040 aa22.11■■□□□ 1.13
AC004540.1-203ENST00000421862 TKFCQ3LXA3 575 aa22.11■■□□□ 1.13
AC004540.1-203ENST00000421862 STAG1Q8WVM7 1258 aa22.11■■□□□ 1.13
AC004540.1-203ENST00000421862 HOMER2Q9NSB8 354 aa22.11■■□□□ 1.13
AC004540.1-203ENST00000421862 RNF146Q9NTX7 359 aa22.11■■□□□ 1.13
AC004540.1-203ENST00000421862 ANAPC4Q9UJX5 808 aa22.11■■□□□ 1.13
AC004540.1-203ENST00000421862 ASTN1O14525 1302 aa22.1■■□□□ 1.13
AC004540.1-203ENST00000421862 CHURC1Q8WUH1 139 aa22.1■■□□□ 1.13
AC004540.1-203ENST00000421862 SPC25Q9HBM1 224 aa22.1■■□□□ 1.13
AC004540.1-203ENST00000421862 IL17RBQ9NRM6 502 aa22.1■■□□□ 1.13
AC004540.1-203ENST00000421862 A0A0U1RQG5 324 aaPredicted RBP22.09■■□□□ 1.13
AC004540.1-203ENST00000421862 TIMP1P01033 207 aa22.09■■□□□ 1.13
AC004540.1-203ENST00000421862 CCDC129Q6ZRS4 1044 aa22.09■■□□□ 1.13
AC004540.1-203ENST00000421862 RASGRP2Q7LDG7 609 aa22.09■■□□□ 1.13
AC004540.1-203ENST00000421862 AGBL1Q96MI9 1066 aa22.09■■□□□ 1.13
AC004540.1-203ENST00000421862 STX8Q9UNK0 236 aa22.09■■□□□ 1.13
AC004540.1-203ENST00000421862 SOWAHBA6NEL2 793 aa22.08■■□□□ 1.13
AC004540.1-203ENST00000421862 TSPY2A6NKD2 308 aa22.08■■□□□ 1.13
AC004540.1-203ENST00000421862 FGRP09769 529 aa22.08■■□□□ 1.13
AC004540.1-203ENST00000421862 MFSD5Q6N075 450 aa22.08■■□□□ 1.13
AC004540.1-203ENST00000421862 FAM126BQ8IXS8 530 aa22.08■■□□□ 1.13
AC004540.1-203ENST00000421862 COL25A1Q9BXS0 654 aaPredicted RBP22.08■■□□□ 1.13
AC004540.1-203ENST00000421862 GNEQ9Y223 722 aaKnown RBP22.08■■□□□ 1.13
AC004540.1-203ENST00000421862 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.07■■□□□ 1.12
AC004540.1-203ENST00000421862 ARVCFO00192 962 aa22.07■■□□□ 1.12
AC004540.1-203ENST00000421862 ORC4O43929 436 aa22.07■■□□□ 1.12
AC004540.1-203ENST00000421862 NMT2O60551 498 aa22.07■■□□□ 1.12
AC004540.1-203ENST00000421862 MCCP23508 829 aa22.07■■□□□ 1.12
AC004540.1-203ENST00000421862 CTDSPL2Q05D32 466 aa22.07■■□□□ 1.12
AC004540.1-203ENST00000421862 VPS53Q5VIR6 699 aa22.07■■□□□ 1.12
AC004540.1-203ENST00000421862 RCSD1Q6JBY9 416 aa22.07■■□□□ 1.12
AC004540.1-203ENST00000421862 MAFAQ8NHW3 353 aaPredicted RBP22.07■■□□□ 1.12
AC004540.1-203ENST00000421862 MYLIPQ8WY64 445 aa22.07■■□□□ 1.12
AC004540.1-203ENST00000421862 PRR12Q9ULL5 1215 aa22.07■■□□□ 1.12
AC004540.1-203ENST00000421862 ZMYM6O95789 1325 aa22.06■■□□□ 1.12
AC004540.1-203ENST00000421862 CHD9Q3L8U1 2897 aa22.06■■□□□ 1.12
AC004540.1-203ENST00000421862 ASB14A6NK59 587 aa22.06■■□□□ 1.12
AC004540.1-203ENST00000421862 GNASQ5JWF2 1037 aa22.06■■□□□ 1.12
AC004540.1-203ENST00000421862 RASIP1Q5U651 963 aa22.06■■□□□ 1.12
AC004540.1-203ENST00000421862 KCTD1Q719H9 257 aa22.06■■□□□ 1.12
AC004540.1-203ENST00000421862 SLC43A3Q8NBI5 491 aa22.06■■□□□ 1.12
AC004540.1-203ENST00000421862 TRERF1Q96PN7 1200 aa22.06■■□□□ 1.12
AC004540.1-203ENST00000421862 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.06■■□□□ 1.12
AC004540.1-203ENST00000421862 CYP39A1Q9NYL5 469 aa22.06■■□□□ 1.12
AC004540.1-203ENST00000421862 TANC1Q9C0D5 1861 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms