RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 ZBED2Q9BTP6 218 aa6.93□□□□□ -1.3
HDAC8-212ENST00000421523 DNAJC18Q9H819 358 aa6.93□□□□□ -1.3
HDAC8-212ENST00000421523 SMC4Q9NTJ3 1288 aa6.93□□□□□ -1.3
HDAC8-212ENST00000421523 ABCF2Q9UG63 623 aa6.93□□□□□ -1.3
HDAC8-212ENST00000421523 NBEAQ8NFP9 2946 aa6.93□□□□□ -1.3
HDAC8-212ENST00000421523 SIP14410 1827 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 PTPRSQ13332 1948 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 BPTFQ12830 3046 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 CCER2I3L3R5 266 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 STXBP3O00186 592 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 ADCY6O43306 1168 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 GH2P01242 217 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 PFKMP08237 780 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 UBTFL1P0CB47 393 aaPredicted RBP6.92□□□□□ -1.3
HDAC8-212ENST00000421523 CST5P28325 142 aaPredicted RBP6.92□□□□□ -1.3
HDAC8-212ENST00000421523 IL15P40933 162 aaPredicted RBP6.92□□□□□ -1.3
HDAC8-212ENST00000421523 PHKA1P46020 1223 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 KCNJ6P48051 423 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 BEX3Q00994 111 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 PUM1Q14671 1186 aaKnown RBP eCLIP6.92□□□□□ -1.3
HDAC8-212ENST00000421523 SMAD2Q15796 467 aaKnown RBP6.92□□□□□ -1.3
HDAC8-212ENST00000421523 MCTP2Q6DN12 878 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 CXCL17Q6UXB2 119 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 SLF2Q8IX21 1173 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 SHCBP1Q8NEM2 672 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 PHOSPHO2Q8TCD6 241 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 ZNF384Q8TF68 577 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 PABPC5Q96DU9 382 aaKnown RBP6.92□□□□□ -1.3
HDAC8-212ENST00000421523 FAM163AQ96GL9 167 aaPredicted RBP6.92□□□□□ -1.3
HDAC8-212ENST00000421523 C12orf42Q96LP6 360 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 AGBL1Q96MI9 1066 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 TGS1Q96RS0 853 aaKnown RBP6.92□□□□□ -1.3
HDAC8-212ENST00000421523 CRBNQ96SW2 442 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 MMP19Q99542 508 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 MEIS3Q99687 375 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 FTOQ9C0B1 505 aaKnown RBP eCLIP6.92□□□□□ -1.3
HDAC8-212ENST00000421523 TANGO6Q9C0B7 1094 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 SPC25Q9HBM1 224 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 FAM184BQ9ULE4 1060 aa6.92□□□□□ -1.3
HDAC8-212ENST00000421523 PA2G4Q9UQ80 394 aaKnown RBP6.92□□□□□ -1.3
HDAC8-212ENST00000421523 PDS5AQ29RF7 1337 aaKnown RBP6.92□□□□□ -1.3
HDAC8-212ENST00000421523 SEMA3EO15041 775 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 DUSP11O75319 330 aaKnown RBP6.91□□□□□ -1.3
HDAC8-212ENST00000421523 CYP2C9P11712 490 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 ADORA1P30542 326 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 TIMM10P62072 90 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 SIGLEC14Q08ET2 396 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 ITGA7Q13683 1181 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 RAB3GAP1Q15042 981 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 ATP2B3Q16720 1220 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 NBPF20Q3BBV1 942 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 TIGD5Q53EQ6 642 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 TCEAL5Q5H9L2 206 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 CCDC102BQ68D86 513 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 RPAINQ86UA6 219 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 TEX11Q8IYF3 940 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 ABRAQ8N0Z2 381 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 BANK1Q8NDB2 785 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 FBXO22Q8NEZ5 403 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 KCNG4Q8TDN1 519 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 ACER1Q8TDN7 264 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 ASIC4Q96FT7 647 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 CHAMP1Q96JM3 812 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 HINFPQ9BQA5 517 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 API5Q9BZZ5 524 aaKnown RBP6.91□□□□□ -1.3
HDAC8-212ENST00000421523 SIL1Q9H173 461 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 MROH8Q9H579 483 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 GNL3LQ9NVN8 582 aaKnown RBP6.91□□□□□ -1.3
HDAC8-212ENST00000421523 CEP126Q9P2H0 1117 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 PI4KBQ9UBF8 816 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 CDK5RAP2Q96SN8 1893 aa6.91□□□□□ -1.3
HDAC8-212ENST00000421523 ZNFX1Q9P2E3 1918 aaKnown RBP6.91□□□□□ -1.3
HDAC8-212ENST00000421523 COL11A1P12107 1806 aaPredicted RBP6.9□□□□□ -1.3
HDAC8-212ENST00000421523 GPR75-ASB3A0A0A6YYF3 556 aa6.9□□□□□ -1.3
HDAC8-212ENST00000421523 LINC01553A4QN01 128 aa6.9□□□□□ -1.3
HDAC8-212ENST00000421523 MBTPS2O43462 519 aa6.9□□□□□ -1.3
HDAC8-212ENST00000421523 USP14P54578 494 aa6.9□□□□□ -1.3
HDAC8-212ENST00000421523 ERVK-21P61565 698 aa6.9□□□□□ -1.3
HDAC8-212ENST00000421523 PSMC6P62333 389 aa6.9□□□□□ -1.3
HDAC8-212ENST00000421523 MECOMQ03112 1051 aa6.9□□□□□ -1.3
HDAC8-212ENST00000421523 DLX2Q07687 328 aaPredicted RBP6.9□□□□□ -1.3
HDAC8-212ENST00000421523 RASGRF1Q13972 1273 aa6.9□□□□□ -1.3
HDAC8-212ENST00000421523 FAM117BQ6P1L5 589 aa6.9□□□□□ -1.3
HDAC8-212ENST00000421523 ZGPATQ8N5A5 531 aaKnown RBP6.9□□□□□ -1.3
HDAC8-212ENST00000421523 MRPL38Q96DV4 380 aaKnown RBP6.9□□□□□ -1.3
HDAC8-212ENST00000421523 C17orf80Q9BSJ5 609 aa6.9□□□□□ -1.3
HDAC8-212ENST00000421523 TRMT13Q9NUP7 481 aaKnown RBP6.9□□□□□ -1.3
HDAC8-212ENST00000421523 DENND2AQ9ULE3 1009 aa6.9□□□□□ -1.3
HDAC8-212ENST00000421523 TNNQ9UQP3 1299 aa6.9□□□□□ -1.3
HDAC8-212ENST00000421523 GRIN2DO15399 1336 aa6.9□□□□□ -1.3
HDAC8-212ENST00000421523 MYO5AQ9Y4I1 1855 aaKnown RBP6.9□□□□□ -1.31
HDAC8-212ENST00000421523 CEP295Q9C0D2 2601 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 A0A1B0GUL7 405 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 RBAK-RBAKDNI3L0D1 243 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 CSPG5O95196 566 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 SNAI1O95863 264 aaPredicted RBP6.89□□□□□ -1.31
HDAC8-212ENST00000421523 TRIM27P14373 513 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 LTBRP36941 435 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 GJA9P57773 515 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 WDR5P61964 334 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms