RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ELMSAN1Q6PJG2 1045 aa11.93□□□□□ -0.5
PTCH1-206ENST00000421141 RAET1EQ8TD07 263 aa11.93□□□□□ -0.5
PTCH1-206ENST00000421141 URI1O94763 535 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-206ENST00000421141 SREBF2Q12772 1141 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 TRIM28Q13263 835 aaKnown RBP11.92□□□□□ -0.5
PTCH1-206ENST00000421141 RPS12P25398 132 aaKnown RBP11.92□□□□□ -0.5
PTCH1-206ENST00000421141 KRT9P35527 623 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 GJC1P36383 396 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 CACNB3P54284 484 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 PTH1RQ03431 593 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 RNASELQ05823 741 aaKnown RBP11.92□□□□□ -0.5
PTCH1-206ENST00000421141 PAK1Q13153 545 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 FAM178BQ8IXR5 827 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 CSGALNACT2Q8N6G5 542 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 RNF26Q9BY78 433 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-206ENST00000421141 DAPK3O43293 454 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 GCFC2P16383 781 aaKnown RBP11.92□□□□□ -0.5
PTCH1-206ENST00000421141 POSTNQ15063 836 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 RNF207Q6ZRF8 634 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 RIOK1Q9BRS2 568 aaKnown RBP11.92□□□□□ -0.5
PTCH1-206ENST00000421141 WDR11Q9BZH6 1224 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 CWC15Q9P013 229 aaKnown RBP11.92□□□□□ -0.5
PTCH1-206ENST00000421141 TNS2Q63HR2 1409 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 KRT86O43790 486 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 DYMQ7RTS9 669 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 SIGLEC1Q9BZZ2 1709 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 USP42Q9H9J4 1324 aaKnown RBP11.92□□□□□ -0.5
PTCH1-206ENST00000421141 ZNF202O95125 648 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 IGKV5-2P06315 115 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 LEKR1Q6ZMV7 388 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 DNAJC25Q9H1X3 360 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 PNMA6FA0A0J9YX94 578 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 K7ENM7 598 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 CKAP4Q07065 602 aaKnown RBP11.92□□□□□ -0.5
PTCH1-206ENST00000421141 Q3C1V9 767 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 LUC7L2Q9Y383 392 aaKnown RBP11.92□□□□□ -0.5
PTCH1-206ENST00000421141 UTYO14607 1347 aa11.92□□□□□ -0.5
PTCH1-206ENST00000421141 ZSWIM6Q9HCJ5 1215 aa11.91□□□□□ -0.5
PTCH1-206ENST00000421141 ZNF157P51786 506 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-206ENST00000421141 RSBN1LQ6PCB5 846 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-206ENST00000421141 MED10Q9BTT4 135 aa11.91□□□□□ -0.5
PTCH1-206ENST00000421141 PCDHA4Q9UN74 947 aa11.91□□□□□ -0.5
PTCH1-206ENST00000421141 TACC1O75410 805 aa11.91□□□□□ -0.5
PTCH1-206ENST00000421141 PUS7LQ9H0K6 701 aaKnown RBP11.91□□□□□ -0.5
PTCH1-206ENST00000421141 AKAP12Q02952 1782 aa11.91□□□□□ -0.5
PTCH1-206ENST00000421141 DLG5Q8TDM6 1919 aa11.91□□□□□ -0.5
PTCH1-206ENST00000421141 NLRP7Q8WX94 980 aa11.91□□□□□ -0.5
PTCH1-206ENST00000421141 CAMTA2O94983 1202 aa11.91□□□□□ -0.5
PTCH1-206ENST00000421141 FCER1AP12319 257 aa11.91□□□□□ -0.5
PTCH1-206ENST00000421141 SLC16A2P36021 539 aa11.91□□□□□ -0.5
PTCH1-206ENST00000421141 ME3Q16798 604 aa11.91□□□□□ -0.5
PTCH1-206ENST00000421141 DEFB132Q7Z7B7 95 aa11.91□□□□□ -0.5
PTCH1-206ENST00000421141 TRMT1Q9NXH9 659 aaKnown RBP11.91□□□□□ -0.5
PTCH1-206ENST00000421141 ABCC12Q96J65 1359 aa11.91□□□□□ -0.5
PTCH1-206ENST00000421141 ATP2A1O14983 1001 aa11.91□□□□□ -0.5
PTCH1-206ENST00000421141 PFKFB2O60825 505 aa11.91□□□□□ -0.5
PTCH1-206ENST00000421141 MMP19Q99542 508 aa11.91□□□□□ -0.5
PTCH1-206ENST00000421141 LARSQ9P2J5 1176 aaKnown RBP11.91□□□□□ -0.5
PTCH1-206ENST00000421141 JAK2O60674 1132 aa11.9□□□□□ -0.5
PTCH1-206ENST00000421141 PLA2G12BQ9BX93 195 aa11.9□□□□□ -0.5
PTCH1-206ENST00000421141 KAT6AQ92794 2004 aa11.9□□□□□ -0.5
PTCH1-206ENST00000421141 PLCB3Q01970 1234 aa11.9□□□□□ -0.5
PTCH1-206ENST00000421141 SNW1Q13573 536 aaKnown RBP11.9□□□□□ -0.5
PTCH1-206ENST00000421141 CNGA4Q8IV77 575 aa11.9□□□□□ -0.5
PTCH1-206ENST00000421141 DYNLL2Q96FJ2 89 aa11.9□□□□□ -0.5
PTCH1-206ENST00000421141 ZMYND15Q9H091 742 aa11.9□□□□□ -0.5
PTCH1-206ENST00000421141 PANK4Q9NVE7 773 aa11.9□□□□□ -0.5
PTCH1-206ENST00000421141 SNAPC2Q13487 334 aa11.9□□□□□ -0.5
PTCH1-206ENST00000421141 TRIM14Q14142 442 aa11.9□□□□□ -0.5
PTCH1-206ENST00000421141 SPECC1Q5M775 1068 aa11.9□□□□□ -0.5
PTCH1-206ENST00000421141 TBC1D16Q8TBP0 767 aa11.9□□□□□ -0.5
PTCH1-206ENST00000421141 ANKFY1Q9P2R3 1169 aa11.9□□□□□ -0.5
PTCH1-206ENST00000421141 GSPT1P15170 499 aaKnown RBP11.9□□□□□ -0.5
PTCH1-206ENST00000421141 CDC37Q16543 378 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-206ENST00000421141 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.9□□□□□ -0.5
PTCH1-206ENST00000421141 COL4A3BPQ9Y5P4 624 aa11.9□□□□□ -0.5
PTCH1-206ENST00000421141 ARHGEF37A1IGU5 675 aa11.9□□□□□ -0.5
PTCH1-206ENST00000421141 TBC1D8BQ0IIM8 1120 aa11.9□□□□□ -0.5
PTCH1-206ENST00000421141 GOLGA6L7A0A1B0GV03 622 aa11.9□□□□□ -0.51
PTCH1-206ENST00000421141 PRKAB2O43741 272 aa11.9□□□□□ -0.51
PTCH1-206ENST00000421141 PSAPP07602 524 aa11.9□□□□□ -0.51
PTCH1-206ENST00000421141 PRDX5P30044 214 aa11.9□□□□□ -0.51
PTCH1-206ENST00000421141 MYL5Q02045 173 aa11.9□□□□□ -0.51
PTCH1-206ENST00000421141 NSMCE1Q8WV22 266 aa11.9□□□□□ -0.51
PTCH1-206ENST00000421141 POMGNT1Q8WZA1 660 aa11.9□□□□□ -0.51
PTCH1-206ENST00000421141 STK10O94804 968 aaKnown RBP11.89□□□□□ -0.51
PTCH1-206ENST00000421141 CCDC175P0C221 793 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 ADD1P35611 737 aaKnown RBP11.89□□□□□ -0.51
PTCH1-206ENST00000421141 ITPK1Q13572 414 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 ANO3Q9BYT9 981 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 ANTXR1Q9H6X2 564 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 MAPK8IP1Q9UQF2 711 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 H0YHG0 523 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 ECE1P42892 770 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 EEPD1Q7L9B9 569 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 RBM46Q8TBY0 533 aaKnown RBP11.89□□□□□ -0.51
PTCH1-206ENST00000421141 KDM6AO15550 1401 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-206ENST00000421141 PXDNLA1KZ92 1463 aa11.89□□□□□ -0.51
PTCH1-206ENST00000421141 DPEP1P16444 411 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms