RNA–Protein interactions for RNA: ENST00000419799.5

NOD1-205, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-205ENST00000419799 TTC28Q96AY4 2481 aa16.47■□□□□ 0.23
NOD1-205ENST00000419799 COL11A1P12107 1806 aaPredicted RBP16.47■□□□□ 0.23
NOD1-205ENST00000419799 SNAI1O95863 264 aaPredicted RBP16.46■□□□□ 0.23
NOD1-205ENST00000419799 APPP05067 770 aa16.46■□□□□ 0.23
NOD1-205ENST00000419799 LRRFIP1Q32MZ4 808 aaKnown RBP16.46■□□□□ 0.23
NOD1-205ENST00000419799 CTR9Q6PD62 1173 aa16.46■□□□□ 0.23
NOD1-205ENST00000419799 PSRC1Q6PGN9 363 aaPredicted RBP16.46■□□□□ 0.23
NOD1-205ENST00000419799 PCSK9Q8NBP7 692 aaKnown RBP16.46■□□□□ 0.23
NOD1-205ENST00000419799 UHRF1Q96T88 793 aaPredicted RBP16.46■□□□□ 0.23
NOD1-205ENST00000419799 MINDY4BA8MYZ0 360 aa16.45■□□□□ 0.22
NOD1-205ENST00000419799 TRIM6-TRIM34B2RNG4 842 aa16.45■□□□□ 0.22
NOD1-205ENST00000419799 EEF2P13639 858 aaKnown RBP16.45■□□□□ 0.22
NOD1-205ENST00000419799 CSF2RAP15509 400 aa16.45■□□□□ 0.22
NOD1-205ENST00000419799 NUCB1Q02818 461 aa16.45■□□□□ 0.22
NOD1-205ENST00000419799 ADGRE1Q14246 886 aa16.45■□□□□ 0.22
NOD1-205ENST00000419799 RAB30Q15771 203 aa16.45■□□□□ 0.22
NOD1-205ENST00000419799 KANSL2Q9H9L4 492 aa16.45■□□□□ 0.22
NOD1-205ENST00000419799 DNAJC25-GNG10A0A024R161 153 aa16.44■□□□□ 0.22
NOD1-205ENST00000419799 MYADML2A6NDP7 307 aa16.44■□□□□ 0.22
NOD1-205ENST00000419799 GSG1L2A8MUP6 293 aa16.44■□□□□ 0.22
NOD1-205ENST00000419799 ARVCFO00192 962 aa16.44■□□□□ 0.22
NOD1-205ENST00000419799 ASGR1P07306 291 aa16.44■□□□□ 0.22
NOD1-205ENST00000419799 TDO2P48775 406 aa16.44■□□□□ 0.22
NOD1-205ENST00000419799 CDK8P49336 464 aa16.44■□□□□ 0.22
NOD1-205ENST00000419799 C12orf60Q5U649 245 aa16.44■□□□□ 0.22
NOD1-205ENST00000419799 ZNF365Q70YC5 407 aa16.44■□□□□ 0.22
NOD1-205ENST00000419799 ZNF467Q7Z7K2 595 aaPredicted RBP16.44■□□□□ 0.22
NOD1-205ENST00000419799 FAM126BQ8IXS8 530 aa16.44■□□□□ 0.22
NOD1-205ENST00000419799 HERVK_113Q902F9 699 aa16.44■□□□□ 0.22
NOD1-205ENST00000419799 RILPL2Q969X0 211 aa16.44■□□□□ 0.22
NOD1-205ENST00000419799 EVI5LQ96CN4 794 aa16.44■□□□□ 0.22
NOD1-205ENST00000419799 GOPCQ9HD26 462 aa16.44■□□□□ 0.22
NOD1-205ENST00000419799 MSRAQ9UJ68 235 aa16.44■□□□□ 0.22
NOD1-205ENST00000419799 ZHX1Q9UKY1 873 aaPredicted RBP16.44■□□□□ 0.22
NOD1-205ENST00000419799 A0A0U1RQG5 324 aaPredicted RBP16.43■□□□□ 0.22
NOD1-205ENST00000419799 TLR3O15455 904 aaKnown RBP16.43■□□□□ 0.22
NOD1-205ENST00000419799 C6orf222P0C671 652 aaPredicted RBP16.43■□□□□ 0.22
NOD1-205ENST00000419799 ZMYM1Q5SVZ6 1142 aa16.43■□□□□ 0.22
NOD1-205ENST00000419799 C16orf86Q6ZW13 317 aa16.43■□□□□ 0.22
NOD1-205ENST00000419799 PLEKHM2Q8IWE5 1019 aa16.43■□□□□ 0.22
NOD1-205ENST00000419799 IL27Q8NEV9 243 aa16.43■□□□□ 0.22
NOD1-205ENST00000419799 FAM122AQ96E09 287 aa16.43■□□□□ 0.22
NOD1-205ENST00000419799 DDX11Q96FC9 970 aa16.43■□□□□ 0.22
NOD1-205ENST00000419799 TEX13BQ9BXU2 312 aa16.43■□□□□ 0.22
NOD1-205ENST00000419799 UPF3AQ9H1J1 476 aaKnown RBP16.43■□□□□ 0.22
NOD1-205ENST00000419799 SPC25Q9HBM1 224 aa16.43■□□□□ 0.22
NOD1-205ENST00000419799 EPB41L4AQ9HCS5 686 aaPredicted RBP16.43■□□□□ 0.22
NOD1-205ENST00000419799 MYH8P13535 1937 aa16.43■□□□□ 0.22
NOD1-205ENST00000419799 ACRP10323 421 aa16.42■□□□□ 0.22
NOD1-205ENST00000419799 IGFBP4P22692 258 aa16.42■□□□□ 0.22
NOD1-205ENST00000419799 GJA9P57773 515 aa16.42■□□□□ 0.22
NOD1-205ENST00000419799 NKX3-2P78367 333 aa16.42■□□□□ 0.22
NOD1-205ENST00000419799 ACVR2BQ13705 512 aa16.42■□□□□ 0.22
NOD1-205ENST00000419799 CCDC85BQ15834 202 aaPredicted RBP16.42■□□□□ 0.22
NOD1-205ENST00000419799 FAM83BQ5T0W9 1011 aa16.42■□□□□ 0.22
NOD1-205ENST00000419799 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.42■□□□□ 0.22
NOD1-205ENST00000419799 VTI1AQ96AJ9 217 aa16.42■□□□□ 0.22
NOD1-205ENST00000419799 PPP1R12CQ9BZL4 782 aa16.42■□□□□ 0.22
NOD1-205ENST00000419799 MTIF3Q9H2K0 278 aaKnown RBP16.42■□□□□ 0.22
NOD1-205ENST00000419799 ABHD16BQ9H3Z7 469 aa16.42■□□□□ 0.22
NOD1-205ENST00000419799 SLC28A3Q9HAS3 691 aa16.42■□□□□ 0.22
NOD1-205ENST00000419799 IL23AQ9NPF7 189 aa16.42■□□□□ 0.22
NOD1-205ENST00000419799 ARPP21Q9UBL0 812 aaPredicted RBP16.42■□□□□ 0.22
NOD1-205ENST00000419799 ATP2A1O14983 1001 aa16.41■□□□□ 0.22
NOD1-205ENST00000419799 ADCY6O43306 1168 aa16.41■□□□□ 0.22
NOD1-205ENST00000419799 CD4P01730 458 aa16.41■□□□□ 0.22
NOD1-205ENST00000419799 GNAT2P19087 354 aa16.41■□□□□ 0.22
NOD1-205ENST00000419799 IRX5P78411 483 aaPredicted RBP16.41■□□□□ 0.22
NOD1-205ENST00000419799 IFNL3Q8IZI9 196 aa16.41■□□□□ 0.22
NOD1-205ENST00000419799 TSPYL2Q9H2G4 693 aaPredicted RBP16.41■□□□□ 0.22
NOD1-205ENST00000419799 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.41■□□□□ 0.22
NOD1-205ENST00000419799 CXXC1Q9P0U4 656 aaPredicted RBP16.41■□□□□ 0.22
NOD1-205ENST00000419799 RIPK3Q9Y572 518 aa16.41■□□□□ 0.22
NOD1-205ENST00000419799 MYH7P12883 1935 aa16.41■□□□□ 0.22
NOD1-205ENST00000419799 PATL2C9JE40 543 aaKnown RBP16.4■□□□□ 0.22
NOD1-205ENST00000419799 FGBP02675 491 aa16.4■□□□□ 0.22
NOD1-205ENST00000419799 CCDC144BQ3MJ40 725 aa16.4■□□□□ 0.22
NOD1-205ENST00000419799 GNASQ5JWF2 1037 aa16.4■□□□□ 0.22
NOD1-205ENST00000419799 SNRNP48Q6IEG0 339 aaKnown RBP16.4■□□□□ 0.22
NOD1-205ENST00000419799 FAM227BQ96M60 508 aa16.4■□□□□ 0.22
NOD1-205ENST00000419799 SLF1Q9BQI6 1058 aa16.4■□□□□ 0.22
NOD1-205ENST00000419799 C1QTNF1Q9BXJ1 281 aa16.4■□□□□ 0.22
NOD1-205ENST00000419799 NKX2-4Q9H2Z4 354 aa16.4■□□□□ 0.22
NOD1-205ENST00000419799 BMP1P13497 986 aa16.39■□□□□ 0.21
NOD1-205ENST00000419799 PRPF38AQ8NAV1 312 aaKnown RBP16.39■□□□□ 0.21
NOD1-205ENST00000419799 SLC43A3Q8NBI5 491 aa16.39■□□□□ 0.21
NOD1-205ENST00000419799 NACAP1Q9BZK3 213 aa16.39■□□□□ 0.21
NOD1-205ENST00000419799 NAPBQ9H115 298 aa16.39■□□□□ 0.21
NOD1-205ENST00000419799 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.21
NOD1-205ENST00000419799 YBX2Q9Y2T7 364 aaKnown RBP16.39■□□□□ 0.21
NOD1-205ENST00000419799 ARIH1Q9Y4X5 557 aaPredicted RBP16.39■□□□□ 0.21
NOD1-205ENST00000419799 A0A0D9SFI3 127 aa16.38■□□□□ 0.21
NOD1-205ENST00000419799 CTAGE5O15320 804 aa16.38■□□□□ 0.21
NOD1-205ENST00000419799 RAD21O60216 631 aa16.38■□□□□ 0.21
NOD1-205ENST00000419799 PRDM1O75626 825 aa16.38■□□□□ 0.21
NOD1-205ENST00000419799 PDE4AP27815 886 aa16.38■□□□□ 0.21
NOD1-205ENST00000419799 CYP2C18P33260 490 aa16.38■□□□□ 0.21
NOD1-205ENST00000419799 NMIQ13287 307 aaPredicted RBP16.38■□□□□ 0.21
NOD1-205ENST00000419799 AAK1Q2M2I8 961 aa16.38■□□□□ 0.21
NOD1-205ENST00000419799 SBK1Q52WX2 424 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms