RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ARRDC4Q8NCT1 418 aa19.36■□□□□ 0.69
LINC00404-201ENST00000418660 ANKS1AQ92625 1134 aa19.36■□□□□ 0.69
LINC00404-201ENST00000418660 RANBP17Q9H2T7 1088 aaKnown RBP19.36■□□□□ 0.69
LINC00404-201ENST00000418660 CNNM2Q9H8M5 875 aa19.36■□□□□ 0.69
LINC00404-201ENST00000418660 GPCPD1Q9NPB8 672 aa19.36■□□□□ 0.69
LINC00404-201ENST00000418660 HOMER2Q9NSB8 354 aa19.36■□□□□ 0.69
LINC00404-201ENST00000418660 RNF146Q9NTX7 359 aa19.36■□□□□ 0.69
LINC00404-201ENST00000418660 ZSWIM5Q9P217 1185 aa19.36■□□□□ 0.69
LINC00404-201ENST00000418660 FRMPD3Q5JV73 1810 aa19.35■□□□□ 0.69
LINC00404-201ENST00000418660 FRMPD2Q68DX3 1309 aaPredicted RBP19.35■□□□□ 0.69
LINC00404-201ENST00000418660 SYNGAP1Q96PV0 1343 aa19.35■□□□□ 0.69
LINC00404-201ENST00000418660 DNM1LO00429 736 aa19.35■□□□□ 0.69
LINC00404-201ENST00000418660 SNHG28P0DPA3 235 aa19.35■□□□□ 0.69
LINC00404-201ENST00000418660 SLC16A2P36021 539 aa19.35■□□□□ 0.69
LINC00404-201ENST00000418660 SNAP25P60880 206 aa19.35■□□□□ 0.69
LINC00404-201ENST00000418660 ZNF543Q08ER8 600 aa19.35■□□□□ 0.69
LINC00404-201ENST00000418660 SYDE2Q5VT97 1194 aa19.35■□□□□ 0.69
LINC00404-201ENST00000418660 ANO1Q5XXA6 986 aa19.35■□□□□ 0.69
LINC00404-201ENST00000418660 TRERF1Q96PN7 1200 aa19.35■□□□□ 0.69
LINC00404-201ENST00000418660 ZSCAN10Q96SZ4 725 aaPredicted RBP19.35■□□□□ 0.69
LINC00404-201ENST00000418660 COLQQ9Y215 455 aaPredicted RBP19.35■□□□□ 0.69
LINC00404-201ENST00000418660 CNPY2Q9Y2B0 182 aa19.35■□□□□ 0.69
LINC00404-201ENST00000418660 PLXNA1Q9UIW2 1896 aa19.35■□□□□ 0.69
LINC00404-201ENST00000418660 SGSM2O43147 1006 aa19.34■□□□□ 0.69
LINC00404-201ENST00000418660 ICAM1P05362 532 aa19.34■□□□□ 0.69
LINC00404-201ENST00000418660 ZNF865P0CJ78 1059 aaPredicted RBP19.34■□□□□ 0.69
LINC00404-201ENST00000418660 ALAS1P13196 640 aa19.34■□□□□ 0.69
LINC00404-201ENST00000418660 HABP4Q5JVS0 413 aaKnown RBP19.34■□□□□ 0.69
LINC00404-201ENST00000418660 CENPQQ7L2Z9 268 aaPredicted RBP19.34■□□□□ 0.69
LINC00404-201ENST00000418660 CCPG1Q9ULG6 757 aa19.34■□□□□ 0.69
LINC00404-201ENST00000418660 SNAI1O95863 264 aaPredicted RBP19.33■□□□□ 0.68
LINC00404-201ENST00000418660 TAL1P17542 331 aaPredicted RBP19.33■□□□□ 0.68
LINC00404-201ENST00000418660 PTH1RQ03431 593 aa19.33■□□□□ 0.68
LINC00404-201ENST00000418660 C7orf61Q8IZ16 206 aa19.33■□□□□ 0.68
LINC00404-201ENST00000418660 SENP6Q9GZR1 1112 aaPredicted RBP19.33■□□□□ 0.68
LINC00404-201ENST00000418660 KAT14Q9H8E8 782 aa19.33■□□□□ 0.68
LINC00404-201ENST00000418660 A1CFQ9NQ94 594 aaKnown RBP19.33■□□□□ 0.68
LINC00404-201ENST00000418660 U3KPZ7 1027 aaPredicted RBP19.33■□□□□ 0.68
LINC00404-201ENST00000418660 POTEB2H3BUK9 544 aa19.32■□□□□ 0.68
LINC00404-201ENST00000418660 RARBP10826 455 aa19.32■□□□□ 0.68
LINC00404-201ENST00000418660 AKR1A1P14550 325 aa19.32■□□□□ 0.68
LINC00404-201ENST00000418660 GPATCH4Q5T3I0 446 aaKnown RBP19.32■□□□□ 0.68
LINC00404-201ENST00000418660 GJC2Q5T442 439 aaPredicted RBP19.32■□□□□ 0.68
LINC00404-201ENST00000418660 CHRDL2Q6WN34 429 aa19.32■□□□□ 0.68
LINC00404-201ENST00000418660 ENAHQ8N8S7 591 aaPredicted RBP19.32■□□□□ 0.68
LINC00404-201ENST00000418660 FAM133AQ8N9E0 248 aa19.32■□□□□ 0.68
LINC00404-201ENST00000418660 PNMA1Q8ND90 353 aa19.32■□□□□ 0.68
LINC00404-201ENST00000418660 FGD4Q96M96 766 aa19.32■□□□□ 0.68
LINC00404-201ENST00000418660 ALPK3Q96L96 1907 aa19.31■□□□□ 0.68
LINC00404-201ENST00000418660 TNKSO95271 1327 aa19.31■□□□□ 0.68
LINC00404-201ENST00000418660 KBTBD13C9JR72 458 aa19.31■□□□□ 0.68
LINC00404-201ENST00000418660 CNTN2Q02246 1040 aa19.31■□□□□ 0.68
LINC00404-201ENST00000418660 LRRC26Q2I0M4 334 aa19.31■□□□□ 0.68
LINC00404-201ENST00000418660 MUM1L1Q5H9M0 696 aa19.31■□□□□ 0.68
LINC00404-201ENST00000418660 UBAC1Q9BSL1 405 aa19.31■□□□□ 0.68
LINC00404-201ENST00000418660 XPNPEP3Q9NQH7 507 aa19.31■□□□□ 0.68
LINC00404-201ENST00000418660 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.31■□□□□ 0.68
LINC00404-201ENST00000418660 PNMA2Q9UL42 364 aa19.31■□□□□ 0.68
LINC00404-201ENST00000418660 FAM184BQ9ULE4 1060 aa19.31■□□□□ 0.68
LINC00404-201ENST00000418660 CYP21A2P08686 494 aa19.3■□□□□ 0.68
LINC00404-201ENST00000418660 TRDNQ13061 729 aa19.3■□□□□ 0.68
LINC00404-201ENST00000418660 ACVR2BQ13705 512 aa19.3■□□□□ 0.68
LINC00404-201ENST00000418660 LRRC41Q15345 812 aa19.3■□□□□ 0.68
LINC00404-201ENST00000418660 ABHD16BQ9H3Z7 469 aa19.3■□□□□ 0.68
LINC00404-201ENST00000418660 CYP39A1Q9NYL5 469 aa19.3■□□□□ 0.68
LINC00404-201ENST00000418660 SOWAHBA6NEL2 793 aa19.29■□□□□ 0.68
LINC00404-201ENST00000418660 SLC34A2O95436 690 aa19.29■□□□□ 0.68
LINC00404-201ENST00000418660 MYCNP04198 464 aaPredicted RBP19.29■□□□□ 0.68
LINC00404-201ENST00000418660 GOLGA8HP0CJ92 632 aa19.29■□□□□ 0.68
LINC00404-201ENST00000418660 ARMCX2Q7L311 632 aa19.29■□□□□ 0.68
LINC00404-201ENST00000418660 MAP4K1Q92918 833 aa19.29■□□□□ 0.68
LINC00404-201ENST00000418660 ZHX1Q9UKY1 873 aaPredicted RBP19.29■□□□□ 0.68
LINC00404-201ENST00000418660 ASB14A6NK59 587 aa19.28■□□□□ 0.68
LINC00404-201ENST00000418660 ASPRV1Q53RT3 343 aa19.28■□□□□ 0.68
LINC00404-201ENST00000418660 IFIT1BQ5T764 474 aaKnown RBP19.28■□□□□ 0.68
LINC00404-201ENST00000418660 NSMFQ6X4W1 530 aa19.28■□□□□ 0.68
LINC00404-201ENST00000418660 CYB5R4Q7L1T6 521 aa19.28■□□□□ 0.68
LINC00404-201ENST00000418660 RNF180Q86T96 592 aa19.28■□□□□ 0.68
LINC00404-201ENST00000418660 CCDC144CPQ8IYA2 1237 aa19.28■□□□□ 0.68
LINC00404-201ENST00000418660 PRO3102Q9H379 93 aa19.28■□□□□ 0.68
LINC00404-201ENST00000418660 RBM27Q9P2N5 1060 aaKnown RBP19.28■□□□□ 0.68
LINC00404-201ENST00000418660 ZMYND8Q9ULU4 1186 aaPredicted RBP19.28■□□□□ 0.68
LINC00404-201ENST00000418660 WDR19Q8NEZ3 1342 aa19.27■□□□□ 0.68
LINC00404-201ENST00000418660 E7EWF7 191 aa19.27■□□□□ 0.68
LINC00404-201ENST00000418660 PGK1P00558 417 aa19.27■□□□□ 0.68
LINC00404-201ENST00000418660 ADCYAP1R1P41586 468 aa19.27■□□□□ 0.68
LINC00404-201ENST00000418660 ATN1P54259 1190 aaPredicted RBP19.27■□□□□ 0.68
LINC00404-201ENST00000418660 SEC23AQ15436 765 aa19.27■□□□□ 0.68
LINC00404-201ENST00000418660 KIAA1211Q6ZU35 1233 aa19.27■□□□□ 0.68
LINC00404-201ENST00000418660 UBA5Q9GZZ9 404 aa19.27■□□□□ 0.68
LINC00404-201ENST00000418660 NFIBO00712 420 aa19.26■□□□□ 0.67
LINC00404-201ENST00000418660 ADAMTS4O75173 837 aa19.26■□□□□ 0.67
LINC00404-201ENST00000418660 PARP1P09874 1014 aaKnown RBP19.26■□□□□ 0.67
LINC00404-201ENST00000418660 SYN1P17600 705 aa19.26■□□□□ 0.67
LINC00404-201ENST00000418660 CCDC144BQ3MJ40 725 aa19.26■□□□□ 0.67
LINC00404-201ENST00000418660 BMP2KLQ5H9B9 411 aa19.26■□□□□ 0.67
LINC00404-201ENST00000418660 SLC39A5Q6ZMH5 540 aa19.26■□□□□ 0.67
LINC00404-201ENST00000418660 RALYLQ86SE5 291 aaKnown RBP19.26■□□□□ 0.67
LINC00404-201ENST00000418660 NCOA7Q8NI08 942 aa19.26■□□□□ 0.67
LINC00404-201ENST00000418660 CLEC4DQ8WXI8 215 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms