RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 ZPR1O75312 459 aa13.36□□□□□ -0.27
LIMK1-202ENST00000418310 LDHBP07195 334 aaKnown RBP13.36□□□□□ -0.27
LIMK1-202ENST00000418310 PLCG1P19174 1290 aa13.36□□□□□ -0.27
LIMK1-202ENST00000418310 CYP2C19P33261 490 aa13.36□□□□□ -0.27
LIMK1-202ENST00000418310 ARHGAP25P42331 645 aa13.36□□□□□ -0.27
LIMK1-202ENST00000418310 SMCR8Q8TEV9 937 aaPredicted RBP13.36□□□□□ -0.27
LIMK1-202ENST00000418310 NAA15Q9BXJ9 866 aaKnown RBP13.36□□□□□ -0.27
LIMK1-202ENST00000418310 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.36□□□□□ -0.27
LIMK1-202ENST00000418310 ARPP21Q9UBL0 812 aaPredicted RBP13.36□□□□□ -0.27
LIMK1-202ENST00000418310 BIN2Q9UBW5 565 aaPredicted RBP13.36□□□□□ -0.27
LIMK1-202ENST00000418310 LIMA1Q9UHB6 759 aaKnown RBP13.36□□□□□ -0.27
LIMK1-202ENST00000418310 PCDHA6Q9UN73 950 aa13.36□□□□□ -0.27
LIMK1-202ENST00000418310 TTF2Q9UNY4 1162 aaKnown RBP13.36□□□□□ -0.27
LIMK1-202ENST00000418310 PCDHA8Q9Y5H6 950 aa13.36□□□□□ -0.27
LIMK1-202ENST00000418310 NDUFA10O95299 355 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 TXNRD1Q16881 649 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 CEP112Q8N8E3 955 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 GJA10Q969M2 543 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 PLEKHA4Q9H4M7 779 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 SLC39A2Q9NP94 309 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 ATP8A2Q9NTI2 1148 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 REXO2Q9Y3B8 237 aaKnown RBP13.35□□□□□ -0.27
LIMK1-202ENST00000418310 SPATA31A1Q5TZJ5 1347 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 FRMPD2Q68DX3 1309 aaPredicted RBP13.35□□□□□ -0.27
LIMK1-202ENST00000418310 ATP1A1P05023 1023 aaKnown RBP13.35□□□□□ -0.27
LIMK1-202ENST00000418310 CALML3P27482 149 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 TXKP42681 527 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 SF3B3Q15393 1217 aaKnown RBP13.35□□□□□ -0.27
LIMK1-202ENST00000418310 KRT26Q7Z3Y9 468 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 CAGE1Q8TC20 777 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 RMND1Q9NWS8 449 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 TMEM260Q9NX78 707 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 TIAM2Q8IVF5 1701 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 KLRF2D3W0D1 207 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 F8W031 263 aaPredicted RBP13.35□□□□□ -0.27
LIMK1-202ENST00000418310 ZNF185O15231 689 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 ORC4O43929 436 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 IDEP14735 1019 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 MATR3P43243 847 aaKnown RBP eCLIP13.35□□□□□ -0.27
LIMK1-202ENST00000418310 SPAG1Q07617 926 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 MB21D1Q8N884 522 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 MYO6Q9UM54 1294 aa13.35□□□□□ -0.27
LIMK1-202ENST00000418310 DOT1LQ8TEK3 1739 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 FAM170AA1A519 330 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 PSMA7O14818 248 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 TBC1D8BQ0IIM8 1120 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 STK4Q13043 487 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 ENOX2Q16206 610 aaKnown RBP13.34□□□□□ -0.27
LIMK1-202ENST00000418310 CABP7Q86V35 215 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 TMEM47Q9BQJ4 181 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 MAD2L2Q9UI95 211 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 BCL9LQ86UU0 1499 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 ABCA3Q99758 1704 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 LRP5O75197 1615 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 PLEKP08567 350 aaPredicted RBP13.34□□□□□ -0.27
LIMK1-202ENST00000418310 ADSSL1Q8N142 457 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 C4orf32Q8N8J7 132 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 OR8K1Q8NGG5 319 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 CCDC151A5D8V7 595 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 LONP1P36776 959 aaKnown RBP13.34□□□□□ -0.27
LIMK1-202ENST00000418310 PICALMQ13492 652 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 STIM1Q13586 685 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 ANKRD13CQ8N6S4 541 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 TUBGCP2Q9BSJ2 902 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 LACRTQ9GZZ8 138 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 FAM207AQ9NSI2 230 aaPredicted RBP13.34□□□□□ -0.27
LIMK1-202ENST00000418310 EXOC1Q9NV70 894 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 FAN1Q9Y2M0 1017 aa13.34□□□□□ -0.27
LIMK1-202ENST00000418310 DOCK2Q92608 1830 aa13.33□□□□□ -0.27
LIMK1-202ENST00000418310 RCCD1A6NED2 376 aa13.33□□□□□ -0.28
LIMK1-202ENST00000418310 SLURP2P0DP57 97 aa13.33□□□□□ -0.28
LIMK1-202ENST00000418310 C12orf60Q5U649 245 aa13.33□□□□□ -0.28
LIMK1-202ENST00000418310 JADE2Q9NQC1 790 aa13.33□□□□□ -0.28
LIMK1-202ENST00000418310 ADAM21Q9UKJ8 722 aa13.33□□□□□ -0.28
LIMK1-202ENST00000418310 SMCO2A6NFE2 343 aa13.33□□□□□ -0.28
LIMK1-202ENST00000418310 SSBP05455 408 aaKnown RBP eCLIP13.33□□□□□ -0.28
LIMK1-202ENST00000418310 AMOTL1Q8IY63 956 aa13.33□□□□□ -0.28
LIMK1-202ENST00000418310 CNOT6LQ96LI5 555 aaKnown RBP13.33□□□□□ -0.28
LIMK1-202ENST00000418310 TCP11L1Q9NUJ3 509 aa13.33□□□□□ -0.28
LIMK1-202ENST00000418310 CACNA1SQ13698 1873 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 LRRC41Q15345 812 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 KCTD19Q17RG1 926 aaPredicted RBP13.32□□□□□ -0.28
LIMK1-202ENST00000418310 BEND6Q5SZJ8 279 aaPredicted RBP13.32□□□□□ -0.28
LIMK1-202ENST00000418310 ANKRD40Q6AI12 368 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 RIN2Q8WYP3 895 aaPredicted RBP13.32□□□□□ -0.28
LIMK1-202ENST00000418310 PIGSQ96S52 555 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 MMS19Q96T76 1030 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 TRIM34Q9BYJ4 488 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 KANSL2Q9H9L4 492 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 SMARCAL1Q9NZC9 954 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 H7C1D1 291 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 TRAPPC10P48553 1259 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 HERVK_113P62684 666 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 RAD51AP2Q09MP3 1159 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 JAKMIP2Q96AA8 810 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 COA7Q96BR5 231 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 NOC4LQ9BVI4 516 aaKnown RBP13.32□□□□□ -0.28
LIMK1-202ENST00000418310 LGALS16A8MUM7 142 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 ANKRD65E5RJM6 399 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 STXBP3O00186 592 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms