RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 ARPP21Q9UBL0 812 aaPredicted RBP9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 MYH7P12883 1935 aa9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CABYRO75952 493 aa9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 NDUFB10O96000 172 aa9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 MS4A1P11836 297 aa9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CYP2C18P33260 490 aa9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 IRX5P78411 483 aaPredicted RBP9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CCDC85BQ15834 202 aaPredicted RBP9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 SBK1Q52WX2 424 aa9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 NOL8Q76FK4 1167 aaKnown RBP9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ARMCX2Q7L311 632 aa9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 PANK1Q8TE04 598 aa9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ADAMTS19Q8TE59 1207 aa9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 HERVK_113Q902F9 699 aa9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 SEZ6LQ9BYH1 1024 aa9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 RAVER2Q9HCJ3 691 aaKnown RBP9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CLIP2Q9UDT6 1046 aa9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 FEM1BQ9UK73 627 aa9.41□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ZBED9Q6R2W3 1325 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CD4P01730 458 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 FDX1P10109 184 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 RASA1P20936 1047 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 OAZ1P54368 228 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 NKX3-2P78367 333 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 TNFAIP2Q03169 654 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ADGRE1Q14246 886 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 GIMAP6Q6P9H5 292 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CCDC144CPQ8IYA2 1237 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 RPUSD2Q8IZ73 545 aaKnown RBP9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ZNF444Q8N0Y2 327 aaPredicted RBP9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 MKL1Q969V6 931 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 KIFC2Q96AC6 838 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 UHRF1Q96T88 793 aaPredicted RBP9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 PUS7LQ9H0K6 701 aaKnown RBP9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 AP5M1Q9H0R1 490 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 HIPK3Q9H422 1215 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 SLC38A10Q9HBR0 1119 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ZNF287Q9HBT7 754 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 SYNPO2Q9UMS6 1093 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CDH23Q9H251 3354 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 MYH4Q9Y623 1939 aa9.4□□□□□ -0.9
HLA-DPA1-241ENST00000417724 GREB1LQ9C091 1923 aaPredicted RBP9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 GBF1Q92538 1859 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ASB14A6NK59 587 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 MINDY4BA8MYZ0 360 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 CTAGE5O15320 804 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ADCY6O43306 1168 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ZEB2O60315 1214 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 BEX3Q00994 111 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ITGA7Q13683 1181 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 AAK1Q2M2I8 961 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 CXCL17Q6UXB2 119 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 OTOP2Q7RTS6 562 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 STK11IPQ8N1F8 1099 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 SLC43A3Q8NBI5 491 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 FGD4Q96M96 766 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 STRBPQ96SI9 672 aaKnown RBP9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 NKX2-4Q9H2Z4 354 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 CXXC1Q9P0U4 656 aaPredicted RBP9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 SLC4A7Q9Y6M7 1214 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 BDP1A6H8Y1 2624 aa9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 TCF20Q9UGU0 1960 aaKnown RBP9.39□□□□□ -0.91
HLA-DPA1-241ENST00000417724 SPTBN5Q9NRC6 3674 aaKnown RBP9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 GSG1L2A8MUP6 293 aa9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 TTLL1O95922 423 aa9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 CHGBP05060 677 aa9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 BMP3P12645 472 aa9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 CNTN2Q02246 1040 aa9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 FSCN1Q16658 493 aaKnown RBP9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 SIRT2Q8IXJ6 389 aa9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 FAM133AQ8N9E0 248 aa9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 GMCL1P1Q8NEA9 526 aa9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 CHURC1Q8WUH1 139 aa9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 C1QTNF1Q9BXJ1 281 aa9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 KATNBL1Q9H079 304 aa9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 CHMP4BQ9H444 224 aaKnown RBP9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ACAD9Q9H845 621 aa9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 HOMER2Q9NSB8 354 aa9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 MTMR4Q9NYA4 1195 aa9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 COG6Q9Y2V7 657 aa9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 PCDHA11Q9Y5I1 949 aa9.38□□□□□ -0.91
HLA-DPA1-241ENST00000417724 IGKV6D-41A0A0C4DH26 115 aa9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 DYNC1LI2O43237 492 aaPredicted RBP9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 APPP05067 770 aa9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 GNAT2P19087 354 aa9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 CCL23P55773 120 aa9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 HNRNPUQ00839 825 aaKnown RBP eCLIP9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 TKFCQ3LXA3 575 aa9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 PPP2R2DQ66LE6 453 aa9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 SLFN13Q68D06 897 aa9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 IQSEC1Q6DN90 963 aa9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 TLK2Q86UE8 772 aa9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 FAM122AQ96E09 287 aa9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 CEP95Q96GE4 821 aa9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 NOC4LQ9BVI4 516 aaKnown RBP9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 TRPV6Q9H1D0 765 aa9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ZBTB40Q9NUA8 1239 aa9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 RAPGEFL1Q9UHV5 662 aa9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ISY1Q9ULR0 285 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms