RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 CYP2C18P33260 490 aa21.47■■□□□ 1.03
VCP-202ENST00000417448 STAT3P40763 770 aa21.47■■□□□ 1.03
VCP-202ENST00000417448 MICALL1Q8N3F8 863 aa21.47■■□□□ 1.03
VCP-202ENST00000417448 SDR42E1Q8WUS8 393 aa21.47■■□□□ 1.03
VCP-202ENST00000417448 EPHX3Q9H6B9 360 aa21.47■■□□□ 1.03
VCP-202ENST00000417448 SLC28A3Q9HAS3 691 aa21.47■■□□□ 1.03
VCP-202ENST00000417448 ARHGEF10LQ9HCE6 1279 aa21.47■■□□□ 1.03
VCP-202ENST00000417448 IL23AQ9NPF7 189 aa21.47■■□□□ 1.03
VCP-202ENST00000417448 ZHX1Q9UKY1 873 aaPredicted RBP21.47■■□□□ 1.03
VCP-202ENST00000417448 FAM184BQ9ULE4 1060 aa21.47■■□□□ 1.03
VCP-202ENST00000417448 LRRC37A2A6NM11 1700 aa21.46■■□□□ 1.03
VCP-202ENST00000417448 MAGEB6P1A0A0J9YX57 407 aa21.46■■□□□ 1.03
VCP-202ENST00000417448 SMIM22K7EJ46 135 aa21.46■■□□□ 1.03
VCP-202ENST00000417448 ARVCFO00192 962 aa21.46■■□□□ 1.03
VCP-202ENST00000417448 VWA5AO00534 786 aa21.46■■□□□ 1.03
VCP-202ENST00000417448 DUSP11O75319 330 aaKnown RBP21.46■■□□□ 1.03
VCP-202ENST00000417448 ADD2P35612 726 aa21.46■■□□□ 1.03
VCP-202ENST00000417448 DCP1AQ9NPI6 582 aaPredicted RBP21.46■■□□□ 1.03
VCP-202ENST00000417448 UMODL1Q5DID0 1318 aa21.46■■□□□ 1.03
VCP-202ENST00000417448 A0A0U1RQG5 324 aaPredicted RBP21.45■■□□□ 1.02
VCP-202ENST00000417448 CD4P01730 458 aa21.45■■□□□ 1.02
VCP-202ENST00000417448 C6orf222P0C671 652 aaPredicted RBP21.45■■□□□ 1.02
VCP-202ENST00000417448 RABGGTBP53611 331 aa21.45■■□□□ 1.02
VCP-202ENST00000417448 MAMDC4Q6UXC1 1216 aa21.45■■□□□ 1.02
VCP-202ENST00000417448 MSL3Q8N5Y2 521 aaKnown RBP21.45■■□□□ 1.02
VCP-202ENST00000417448 PPP1R9AQ9ULJ8 1098 aa21.45■■□□□ 1.02
VCP-202ENST00000417448 ARIH1Q9Y4X5 557 aaPredicted RBP21.45■■□□□ 1.02
VCP-202ENST00000417448 MUC6Q6W4X9 2439 aa21.44■■□□□ 1.02
VCP-202ENST00000417448 MYOGP15173 224 aa21.44■■□□□ 1.02
VCP-202ENST00000417448 TMED8Q6PL24 325 aaPredicted RBP21.44■■□□□ 1.02
VCP-202ENST00000417448 OTOP2Q7RTS6 562 aa21.44■■□□□ 1.02
VCP-202ENST00000417448 KBTBD3Q8NAB2 608 aa21.44■■□□□ 1.02
VCP-202ENST00000417448 CRNKL1Q9BZJ0 848 aaKnown RBP21.44■■□□□ 1.02
VCP-202ENST00000417448 UPF3AQ9H1J1 476 aaKnown RBP21.44■■□□□ 1.02
VCP-202ENST00000417448 TSPYL2Q9H2G4 693 aaPredicted RBP21.44■■□□□ 1.02
VCP-202ENST00000417448 SH2D4AQ9H788 454 aa21.44■■□□□ 1.02
VCP-202ENST00000417448 ARMT1Q9H993 441 aa21.44■■□□□ 1.02
VCP-202ENST00000417448 SWAP70Q9UH65 585 aa21.44■■□□□ 1.02
VCP-202ENST00000417448 DNAJC25-GNG10A0A024R161 153 aa21.43■■□□□ 1.02
VCP-202ENST00000417448 CTAGE5O15320 804 aa21.43■■□□□ 1.02
VCP-202ENST00000417448 LCORLQ8N3X6 602 aa21.43■■□□□ 1.02
VCP-202ENST00000417448 PCSK9Q8NBP7 692 aaKnown RBP21.43■■□□□ 1.02
VCP-202ENST00000417448 VTI1AQ96AJ9 217 aa21.43■■□□□ 1.02
VCP-202ENST00000417448 CCDC136Q96JN2 1154 aa21.43■■□□□ 1.02
VCP-202ENST00000417448 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.43■■□□□ 1.02
VCP-202ENST00000417448 HCN4Q9Y3Q4 1203 aa21.43■■□□□ 1.02
VCP-202ENST00000417448 RIPK3Q9Y572 518 aa21.43■■□□□ 1.02
VCP-202ENST00000417448 FGBP02675 491 aa21.42■■□□□ 1.02
VCP-202ENST00000417448 EEF2P13639 858 aaKnown RBP21.42■■□□□ 1.02
VCP-202ENST00000417448 GJA9P57773 515 aa21.42■■□□□ 1.02
VCP-202ENST00000417448 PPP2R2DQ66LE6 453 aa21.42■■□□□ 1.02
VCP-202ENST00000417448 FGD4Q96M96 766 aa21.42■■□□□ 1.02
VCP-202ENST00000417448 FSD1Q9BTV5 496 aa21.42■■□□□ 1.02
VCP-202ENST00000417448 PUS7LQ9H0K6 701 aaKnown RBP21.42■■□□□ 1.02
VCP-202ENST00000417448 GREB1LQ9C091 1923 aaPredicted RBP21.41■■□□□ 1.02
VCP-202ENST00000417448 TRIM6-TRIM34B2RNG4 842 aa21.41■■□□□ 1.02
VCP-202ENST00000417448 PRKAB2O43741 272 aa21.41■■□□□ 1.02
VCP-202ENST00000417448 MBD4O95243 580 aa21.41■■□□□ 1.02
VCP-202ENST00000417448 ACVR2BQ13705 512 aa21.41■■□□□ 1.02
VCP-202ENST00000417448 CCDC144BQ3MJ40 725 aa21.41■■□□□ 1.02
VCP-202ENST00000417448 FAM83BQ5T0W9 1011 aa21.41■■□□□ 1.02
VCP-202ENST00000417448 RILPL2Q969X0 211 aa21.41■■□□□ 1.02
VCP-202ENST00000417448 VWCEQ96DN2 955 aa21.41■■□□□ 1.02
VCP-202ENST00000417448 C11orf16Q9NQ32 467 aa21.41■■□□□ 1.02
VCP-202ENST00000417448 TLR3O15455 904 aaKnown RBP21.4■■□□□ 1.02
VCP-202ENST00000417448 RNF113AO15541 343 aaKnown RBP21.4■■□□□ 1.02
VCP-202ENST00000417448 COPB2P35606 906 aa21.4■■□□□ 1.02
VCP-202ENST00000417448 GNASQ5JWF2 1037 aa21.4■■□□□ 1.02
VCP-202ENST00000417448 KHSRPQ92945 711 aaKnown RBP eCLIP21.4■■□□□ 1.02
VCP-202ENST00000417448 SEC62Q99442 399 aaKnown RBP21.4■■□□□ 1.02
VCP-202ENST00000417448 MTIF3Q9H2K0 278 aaKnown RBP21.4■■□□□ 1.02
VCP-202ENST00000417448 HIPK3Q9H422 1215 aa21.4■■□□□ 1.02
VCP-202ENST00000417448 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.4■■□□□ 1.02
VCP-202ENST00000417448 CYP2D7A0A087X1C5 515 aa21.39■■□□□ 1.01
VCP-202ENST00000417448 RFXAPO00287 272 aa21.39■■□□□ 1.01
VCP-202ENST00000417448 UBE3CQ15386 1083 aa21.39■■□□□ 1.01
VCP-202ENST00000417448 AAK1Q2M2I8 961 aa21.39■■□□□ 1.01
VCP-202ENST00000417448 SNRNP48Q6IEG0 339 aaKnown RBP21.39■■□□□ 1.01
VCP-202ENST00000417448 SLC43A3Q8NBI5 491 aa21.39■■□□□ 1.01
VCP-202ENST00000417448 OSBP2Q969R2 916 aa21.39■■□□□ 1.01
VCP-202ENST00000417448 WNT8AQ9H1J5 351 aa21.39■■□□□ 1.01
VCP-202ENST00000417448 M0R2C6 588 aa21.38■■□□□ 1.01
VCP-202ENST00000417448 CDK8P49336 464 aa21.38■■□□□ 1.01
VCP-202ENST00000417448 CCL23P55773 120 aa21.38■■□□□ 1.01
VCP-202ENST00000417448 BEX3Q00994 111 aa21.38■■□□□ 1.01
VCP-202ENST00000417448 SKIV2LQ15477 1246 aaKnown RBP21.38■■□□□ 1.01
VCP-202ENST00000417448 ZSCAN25Q6NSZ9 544 aa21.38■■□□□ 1.01
VCP-202ENST00000417448 CENPQQ7L2Z9 268 aaPredicted RBP21.38■■□□□ 1.01
VCP-202ENST00000417448 ZNF467Q7Z7K2 595 aaPredicted RBP21.38■■□□□ 1.01
VCP-202ENST00000417448 DDX11Q96FC9 970 aa21.38■■□□□ 1.01
VCP-202ENST00000417448 NUP88Q99567 741 aaPredicted RBP21.38■■□□□ 1.01
VCP-202ENST00000417448 TEX13BQ9BXU2 312 aa21.38■■□□□ 1.01
VCP-202ENST00000417448 KATNBL1Q9H079 304 aa21.38■■□□□ 1.01
VCP-202ENST00000417448 OSBPL3Q9H4L5 887 aa21.38■■□□□ 1.01
VCP-202ENST00000417448 SPC25Q9HBM1 224 aa21.38■■□□□ 1.01
VCP-202ENST00000417448 PCDHA11Q9Y5I1 949 aa21.38■■□□□ 1.01
VCP-202ENST00000417448 MTCH2Q9Y6C9 303 aa21.38■■□□□ 1.01
VCP-202ENST00000417448 SCN5AQ14524 2016 aa21.38■■□□□ 1.01
VCP-202ENST00000417448 ASTN1O14525 1302 aa21.37■■□□□ 1.01
VCP-202ENST00000417448 GRIN2DO15399 1336 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms