RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 KLRC3Q07444 240 aa21.9■■□□□ 1.1
RAB3IP-205ENST00000417413 PNOCQ13519 176 aa21.9■■□□□ 1.1
RAB3IP-205ENST00000417413 PPP1R18Q6NYC8 613 aa21.9■■□□□ 1.1
RAB3IP-205ENST00000417413 CDAN1Q8IWY9 1227 aa21.9■■□□□ 1.1
RAB3IP-205ENST00000417413 SYMPKQ92797 1274 aaKnown RBP21.9■■□□□ 1.1
RAB3IP-205ENST00000417413 GMCL1Q96IK5 515 aa21.9■■□□□ 1.1
RAB3IP-205ENST00000417413 TMEM39BQ9GZU3 492 aa21.9■■□□□ 1.1
RAB3IP-205ENST00000417413 SYNPO2Q9UMS6 1093 aa21.9■■□□□ 1.1
RAB3IP-205ENST00000417413 VWA3AA6NCI4 1184 aa21.89■■□□□ 1.09
RAB3IP-205ENST00000417413 ZBTB5O15062 677 aa21.89■■□□□ 1.09
RAB3IP-205ENST00000417413 SLC1A4P43007 532 aa21.89■■□□□ 1.09
RAB3IP-205ENST00000417413 NONOQ15233 471 aaKnown RBP eCLIP21.89■■□□□ 1.09
RAB3IP-205ENST00000417413 GPR162Q16538 588 aa21.89■■□□□ 1.09
RAB3IP-205ENST00000417413 DPCR1Q3MIW9 517 aa21.89■■□□□ 1.09
RAB3IP-205ENST00000417413 CEP57L1Q8IYX8 460 aa21.89■■□□□ 1.09
RAB3IP-205ENST00000417413 GJA3Q9Y6H8 435 aa21.89■■□□□ 1.09
RAB3IP-205ENST00000417413 A0A1W2PRG0 241 aa21.88■■□□□ 1.09
RAB3IP-205ENST00000417413 FOXN1O15353 648 aa21.88■■□□□ 1.09
RAB3IP-205ENST00000417413 ADCY7P51828 1080 aa21.88■■□□□ 1.09
RAB3IP-205ENST00000417413 DHX40Q8IX18 779 aaKnown RBP21.88■■□□□ 1.09
RAB3IP-205ENST00000417413 BIN1O00499 593 aa21.88■■□□□ 1.09
RAB3IP-205ENST00000417413 NDUFB10O96000 172 aa21.88■■□□□ 1.09
RAB3IP-205ENST00000417413 MAP3K10Q02779 954 aa21.88■■□□□ 1.09
RAB3IP-205ENST00000417413 GPC2Q8N158 579 aa21.88■■□□□ 1.09
RAB3IP-205ENST00000417413 REXO1Q8N1G1 1221 aaKnown RBP21.88■■□□□ 1.09
RAB3IP-205ENST00000417413 FAM43AQ8N2R8 423 aa21.88■■□□□ 1.09
RAB3IP-205ENST00000417413 TMEM60Q9H2L4 133 aa21.88■■□□□ 1.09
RAB3IP-205ENST00000417413 TMEM260Q9NX78 707 aa21.88■■□□□ 1.09
RAB3IP-205ENST00000417413 BIN2Q9UBW5 565 aaPredicted RBP21.88■■□□□ 1.09
RAB3IP-205ENST00000417413 YBX3P16989 372 aaKnown RBP eCLIP21.87■■□□□ 1.09
RAB3IP-205ENST00000417413 PDILTQ8N807 584 aa21.87■■□□□ 1.09
RAB3IP-205ENST00000417413 BPIFA3Q9BQP9 254 aa21.87■■□□□ 1.09
RAB3IP-205ENST00000417413 NAT10Q9H0A0 1025 aaKnown RBP21.87■■□□□ 1.09
RAB3IP-205ENST00000417413 RIC8AQ9NPQ8 531 aa21.87■■□□□ 1.09
RAB3IP-205ENST00000417413 PCDHA5Q9Y5H7 936 aa21.87■■□□□ 1.09
RAB3IP-205ENST00000417413 ATAD5Q96QE3 1844 aa21.87■■□□□ 1.09
RAB3IP-205ENST00000417413 H7C1D1 291 aa21.86■■□□□ 1.09
RAB3IP-205ENST00000417413 RAD21O60216 631 aa21.86■■□□□ 1.09
RAB3IP-205ENST00000417413 EGFRP00533 1210 aa21.86■■□□□ 1.09
RAB3IP-205ENST00000417413 LONP1P36776 959 aaKnown RBP21.86■■□□□ 1.09
RAB3IP-205ENST00000417413 GMPSP49915 693 aaPredicted RBP21.86■■□□□ 1.09
RAB3IP-205ENST00000417413 POSTNQ15063 836 aa21.86■■□□□ 1.09
RAB3IP-205ENST00000417413 ZRSR1Q15695 479 aaKnown RBP21.86■■□□□ 1.09
RAB3IP-205ENST00000417413 JAKMIP3Q5VZ66 844 aa21.86■■□□□ 1.09
RAB3IP-205ENST00000417413 KANK3Q6NY19 840 aa21.86■■□□□ 1.09
RAB3IP-205ENST00000417413 RNF181Q9P0P0 153 aa21.86■■□□□ 1.09
RAB3IP-205ENST00000417413 HOOK1Q9UJC3 728 aaKnown RBP21.86■■□□□ 1.09
RAB3IP-205ENST00000417413 ZBTB21Q9ULJ3 1066 aa21.86■■□□□ 1.09
RAB3IP-205ENST00000417413 LAD1O00515 517 aa21.85■■□□□ 1.09
RAB3IP-205ENST00000417413 PRR29P0C7W0 189 aa21.85■■□□□ 1.09
RAB3IP-205ENST00000417413 PLCB2Q00722 1185 aa21.85■■□□□ 1.09
RAB3IP-205ENST00000417413 QRICH1Q2TAL8 776 aa21.85■■□□□ 1.09
RAB3IP-205ENST00000417413 NT5DC1Q5TFE4 455 aa21.85■■□□□ 1.09
RAB3IP-205ENST00000417413 NEK8Q86SG6 692 aa21.85■■□□□ 1.09
RAB3IP-205ENST00000417413 DHX58Q96C10 678 aa21.85■■□□□ 1.09
RAB3IP-205ENST00000417413 NUP88Q99567 741 aaPredicted RBP21.85■■□□□ 1.09
RAB3IP-205ENST00000417413 CCDC39Q9UFE4 941 aa21.85■■□□□ 1.09
RAB3IP-205ENST00000417413 SLFN14P0C7P3 912 aa21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 PRPHP41219 470 aa21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 SARSP49591 514 aaKnown RBP21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 CLK2P49760 499 aaKnown RBP21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 BTNL9Q6UXG8 535 aa21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 SH3RF1Q7Z6J0 888 aa21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 TBCKQ8TEA7 893 aa21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 DICER1Q9UPY3 1922 aaKnown RBP21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 ESPNB1AK53 854 aa21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 EDIL3O43854 480 aa21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 BMP3P12645 472 aa21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 ORC2Q13416 577 aaPredicted RBP21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 CDC37Q16543 378 aaPredicted RBP21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 MIGA2Q7L4E1 593 aa21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 MICALL2Q8IY33 904 aa21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 GRAMD1CQ8IYS0 662 aa21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 AOPEPQ8N6M6 819 aa21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 ARHGEF10LQ9HCE6 1279 aa21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 RRAGDQ9NQL2 400 aaPredicted RBP21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 CNOT7Q9UIV1 285 aaKnown RBP21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 TMX2Q9Y320 296 aa21.84■■□□□ 1.09
RAB3IP-205ENST00000417413 GOLGA6L19H0YKK7 550 aa21.83■■□□□ 1.08
RAB3IP-205ENST00000417413 CAP2P40123 477 aa21.83■■□□□ 1.08
RAB3IP-205ENST00000417413 ECE1P42892 770 aa21.83■■□□□ 1.08
RAB3IP-205ENST00000417413 TNNI2P48788 182 aa21.83■■□□□ 1.08
RAB3IP-205ENST00000417413 E2F4Q16254 413 aa21.83■■□□□ 1.08
RAB3IP-205ENST00000417413 LETM2Q2VYF4 491 aa21.83■■□□□ 1.08
RAB3IP-205ENST00000417413 ISM2Q6H9L7 571 aa21.83■■□□□ 1.08
RAB3IP-205ENST00000417413 SPATA20Q8TB22 786 aa21.83■■□□□ 1.08
RAB3IP-205ENST00000417413 ACER1Q8TDN7 264 aa21.83■■□□□ 1.08
RAB3IP-205ENST00000417413 TEPSINQ96N21 525 aa21.83■■□□□ 1.08
RAB3IP-205ENST00000417413 ZNF541Q9H0D2 1346 aa21.83■■□□□ 1.08
RAB3IP-205ENST00000417413 MYH7BA7E2Y1 1941 aa21.83■■□□□ 1.08
RAB3IP-205ENST00000417413 BECN2A8MW95 431 aa21.82■■□□□ 1.08
RAB3IP-205ENST00000417413 CCNT1O60563 726 aaKnown RBP21.82■■□□□ 1.08
RAB3IP-205ENST00000417413 TNFAIP1Q13829 316 aa21.82■■□□□ 1.08
RAB3IP-205ENST00000417413 RASA3Q14644 834 aa21.82■■□□□ 1.08
RAB3IP-205ENST00000417413 KIAA1755Q5JYT7 1200 aa21.82■■□□□ 1.08
RAB3IP-205ENST00000417413 SYDE2Q5VT97 1194 aa21.82■■□□□ 1.08
RAB3IP-205ENST00000417413 SARM1Q6SZW1 724 aa21.82■■□□□ 1.08
RAB3IP-205ENST00000417413 DTHD1Q6ZMT9 781 aa21.82■■□□□ 1.08
RAB3IP-205ENST00000417413 PLA2G4DQ86XP0 818 aa21.82■■□□□ 1.08
RAB3IP-205ENST00000417413 CUL5Q93034 780 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms