RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 hCG_1642624A0A1W2PR95 340 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 BACH1O14867 736 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 CRKLP46109 303 aaKnown RBP16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 SPATS2Q86XZ4 545 aaKnown RBP16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 SGSM3Q96HU1 749 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 PCMTD1Q96MG8 357 aaPredicted RBP16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 ZKSCAN3Q9BRR0 538 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 ISCA1Q9BUE6 129 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 HAUS2Q9NVX0 235 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 A0A1B0GUA9 196 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 FECHP22830 423 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 GUCY2FP51841 1108 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 GIGYF2Q6Y7W6 1299 aaKnown RBP16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 NLRP14Q86W24 1093 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 PARP9Q8IXQ6 854 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 ESYT3A0FGR9 886 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 PPP1R37O75864 691 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 EPHB4P54760 987 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 SF3A3Q12874 501 aaKnown RBP eCLIP16.39■□□□□ 0.213e-6■■■■■ 43
NCKIPSD-204ENST00000416649 NLRP10Q86W26 655 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 EHBP1Q8NDI1 1231 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 MYCBPAPQ8TBZ2 947 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 RNF217Q8TC41 542 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 TBC1D31Q96DN5 1066 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 TNS2Q63HR2 1409 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 LTBP4Q8N2S1 1624 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 IRS4O14654 1257 aaPredicted RBP16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 GPAA1O43292 621 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 NR1D1P20393 614 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 KRT83P78385 493 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 TMEM67Q5HYA8 995 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 TICAM2Q86XR7 235 aa16.39■□□□□ 0.21
NCKIPSD-204ENST00000416649 DISP2A7MBM2 1401 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 SPATA31A5Q5VU36 1347 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 SPATA31A7Q8IWB4 1347 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 PHLPP1O60346 1717 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 COL16A1Q07092 1604 aaPredicted RBP16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 EYA2O00167 538 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 RASSF9O75901 435 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 PEX19P40855 299 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 SARNPP82979 210 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 IFIT5Q13325 482 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 TRIM14Q14142 442 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 PTGISQ16647 500 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 CCDC96Q2M329 555 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 RILPL1Q5EBL4 403 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 RRP12Q5JTH9 1297 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 CYB5D1Q6P9G0 228 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 FMNL3Q8IVF7 1028 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 OXER1Q8TDS5 423 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 SRPRBQ9Y5M8 271 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 TCP11X2Q5H9J9 407 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 MAATS1Q7Z4T9 603 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 TBC1D10CQ8IV04 446 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 ELOA2Q8IYF1 753 aaPredicted RBP16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 SPATA4Q8NEY3 305 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 SPATA20Q8TB22 786 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 NOC3LQ8WTT2 800 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 SYMPKQ92797 1274 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 CEP126Q9P2H0 1117 aa16.38■□□□□ 0.21
NCKIPSD-204ENST00000416649 FAM205CA6NFA0 338 aa16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 ITGA6P23229 1130 aa16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 MEX3CQ5U5Q3 659 aaKnown RBP16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 ALS2CLQ60I27 953 aa16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 LDHAL6AQ6ZMR3 332 aa16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 NELFBQ8WX92 580 aa16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 SLC12A7Q9Y666 1083 aa16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 SH2B2O14492 632 aaPredicted RBP16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 OPLAHO14841 1288 aa16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 ZPR1O75312 459 aa16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 MMP1P03956 469 aa16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 CALRP27797 417 aaKnown RBP16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 KIF5AQ12840 1032 aa16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 C8orf74Q6P047 294 aa16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 NFRKBQ6P4R8 1299 aa16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 CNNM1Q9NRU3 951 aa16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 NFU1Q9UMS0 254 aa16.37■□□□□ 0.21
NCKIPSD-204ENST00000416649 ZSCAN5CA6NGD5 496 aaPredicted RBP16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 A6NNZ2 444 aa16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 SEMA3EO15041 775 aa16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 TRIM21P19474 475 aaKnown RBP16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 GCKP35557 465 aa16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 CYLC1P35663 651 aaPredicted RBP16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 PAK1Q13153 545 aa16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 NTRK3Q16288 839 aa16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 SPRED3Q2MJR0 410 aa16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 TUBB8Q3ZCM7 444 aa16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 KRT26Q7Z3Y9 468 aa16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 ZBTB38Q8NAP3 1195 aaPredicted RBP16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 ZNHIT6Q9NWK9 470 aaKnown RBP16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 STIM2Q9P246 746 aa16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 LIMA1Q9UHB6 759 aaKnown RBP16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 TPX2Q9ULW0 747 aaKnown RBP16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 ITGB4P16144 1822 aa16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 VAV2P52735 878 aa16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 CRYMQ14894 314 aa16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 WDR59Q6PJI9 974 aa16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 AGPAT5Q9NUQ2 364 aa16.36■□□□□ 0.21
NCKIPSD-204ENST00000416649 TRIM49BA6NDI0 452 aa16.35■□□□□ 0.21
NCKIPSD-204ENST00000416649 IFIT3O14879 490 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms