RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 RAVER2Q9HCJ3 691 aaKnown RBP15.84■□□□□ 0.13
LINC01398-201ENST00000416581 TMEM39AQ9NV64 488 aa15.84■□□□□ 0.13
LINC01398-201ENST00000416581 RIPK3Q9Y572 518 aa15.84■□□□□ 0.13
LINC01398-201ENST00000416581 TLR3O15455 904 aaKnown RBP15.83■□□□□ 0.12
LINC01398-201ENST00000416581 PQBP1O60828 265 aaKnown RBP15.83■□□□□ 0.12
LINC01398-201ENST00000416581 SNAI1O95863 264 aaPredicted RBP15.83■□□□□ 0.12
LINC01398-201ENST00000416581 TAL1P17542 331 aaPredicted RBP15.83■□□□□ 0.12
LINC01398-201ENST00000416581 TSHZ3Q63HK5 1081 aa15.83■□□□□ 0.12
LINC01398-201ENST00000416581 CCDC129Q6ZRS4 1044 aa15.83■□□□□ 0.12
LINC01398-201ENST00000416581 STAG1Q8WVM7 1258 aa15.83■□□□□ 0.12
LINC01398-201ENST00000416581 RNPC3Q96LT9 517 aaKnown RBP15.83■□□□□ 0.12
LINC01398-201ENST00000416581 UPF3AQ9H1J1 476 aaKnown RBP15.83■□□□□ 0.12
LINC01398-201ENST00000416581 LOC102724159A0A0B4J2E5 919 aa15.82■□□□□ 0.12
LINC01398-201ENST00000416581 TRIM43BA6NCK2 446 aa15.82■□□□□ 0.12
LINC01398-201ENST00000416581 TMEM232C9JQI7 657 aa15.82■□□□□ 0.12
LINC01398-201ENST00000416581 CABYRO75952 493 aa15.82■□□□□ 0.12
LINC01398-201ENST00000416581 C6orf222P0C671 652 aaPredicted RBP15.82■□□□□ 0.12
LINC01398-201ENST00000416581 SLC4A3P48751 1232 aa15.82■□□□□ 0.12
LINC01398-201ENST00000416581 NT5C2P49902 561 aa15.82■□□□□ 0.12
LINC01398-201ENST00000416581 GJA9P57773 515 aa15.82■□□□□ 0.12
LINC01398-201ENST00000416581 AAMPQ13685 434 aa15.82■□□□□ 0.12
LINC01398-201ENST00000416581 PWP2Q15269 919 aaKnown RBP15.82■□□□□ 0.12
LINC01398-201ENST00000416581 RCSD1Q6JBY9 416 aa15.82■□□□□ 0.12
LINC01398-201ENST00000416581 ARMCX2Q7L311 632 aa15.82■□□□□ 0.12
LINC01398-201ENST00000416581 TRIM43Q96BQ3 446 aaPredicted RBP15.82■□□□□ 0.12
LINC01398-201ENST00000416581 EVI5LQ96CN4 794 aa15.82■□□□□ 0.12
LINC01398-201ENST00000416581 RNF146Q9NTX7 359 aa15.82■□□□□ 0.12
LINC01398-201ENST00000416581 STX8Q9UNK0 236 aa15.82■□□□□ 0.12
LINC01398-201ENST00000416581 COL6A3P12111 3177 aa15.81■□□□□ 0.12
LINC01398-201ENST00000416581 A0A0U1RQG5 324 aaPredicted RBP15.81■□□□□ 0.12
LINC01398-201ENST00000416581 PCP11498 1178 aaKnown RBP15.81■□□□□ 0.12
LINC01398-201ENST00000416581 NKX3-2P78367 333 aa15.81■□□□□ 0.12
LINC01398-201ENST00000416581 PPIGQ13427 754 aaKnown RBP eCLIP15.81■□□□□ 0.12
LINC01398-201ENST00000416581 KCNA10Q16322 511 aa15.81■□□□□ 0.12
LINC01398-201ENST00000416581 CCDC144BQ3MJ40 725 aa15.81■□□□□ 0.12
LINC01398-201ENST00000416581 GUCD1Q96NT3 240 aa15.81■□□□□ 0.12
LINC01398-201ENST00000416581 MTIF3Q9H2K0 278 aaKnown RBP15.81■□□□□ 0.12
LINC01398-201ENST00000416581 ANAPC4Q9UJX5 808 aa15.81■□□□□ 0.12
LINC01398-201ENST00000416581 A0A0C4DFX4 3053 aa15.81■□□□□ 0.12
LINC01398-201ENST00000416581 MCM3APO60318 1980 aa15.8■□□□□ 0.12
LINC01398-201ENST00000416581 ORC4O43929 436 aa15.8■□□□□ 0.12
LINC01398-201ENST00000416581 ZEB2O60315 1214 aa15.8■□□□□ 0.12
LINC01398-201ENST00000416581 C9orf50Q5SZB4 431 aa15.8■□□□□ 0.12
LINC01398-201ENST00000416581 CCSAPQ6IQ19 270 aaPredicted RBP15.8■□□□□ 0.12
LINC01398-201ENST00000416581 SH3RF1Q7Z6J0 888 aa15.8■□□□□ 0.12
LINC01398-201ENST00000416581 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.8■□□□□ 0.12
LINC01398-201ENST00000416581 FAM133AQ8N9E0 248 aa15.8■□□□□ 0.12
LINC01398-201ENST00000416581 DCAF4Q8WV16 495 aa15.8■□□□□ 0.12
LINC01398-201ENST00000416581 HELLSQ9NRZ9 838 aa15.8■□□□□ 0.12
LINC01398-201ENST00000416581 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.8■□□□□ 0.12
LINC01398-201ENST00000416581 ZMYM6O95789 1325 aa15.79■□□□□ 0.12
LINC01398-201ENST00000416581 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.79■□□□□ 0.12
LINC01398-201ENST00000416581 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.79■□□□□ 0.12
LINC01398-201ENST00000416581 TIMP1P01033 207 aa15.79■□□□□ 0.12
LINC01398-201ENST00000416581 ASGR1P07306 291 aa15.79■□□□□ 0.12
LINC01398-201ENST00000416581 FAAP100Q0VG06 881 aa15.79■□□□□ 0.12
LINC01398-201ENST00000416581 ALX1Q15699 326 aa15.79■□□□□ 0.12
LINC01398-201ENST00000416581 GNASQ5JWF2 1037 aa15.79■□□□□ 0.12
LINC01398-201ENST00000416581 PSRC1Q6PGN9 363 aaPredicted RBP15.79■□□□□ 0.12
LINC01398-201ENST00000416581 CCDC144CPQ8IYA2 1237 aa15.79■□□□□ 0.12
LINC01398-201ENST00000416581 TMEM199Q8N511 208 aa15.79■□□□□ 0.12
LINC01398-201ENST00000416581 VTI1AQ96AJ9 217 aa15.79■□□□□ 0.12
LINC01398-201ENST00000416581 SEC62Q99442 399 aaKnown RBP15.79■□□□□ 0.12
LINC01398-201ENST00000416581 MPHOSPH6Q99547 160 aaKnown RBP15.79■□□□□ 0.12
LINC01398-201ENST00000416581 A1CFQ9NQ94 594 aaKnown RBP15.79■□□□□ 0.12
LINC01398-201ENST00000416581 HOMER2Q9NSB8 354 aa15.79■□□□□ 0.12
LINC01398-201ENST00000416581 ADD3Q9UEY8 706 aaKnown RBP15.79■□□□□ 0.12
LINC01398-201ENST00000416581 TBX21Q9UL17 535 aa15.79■□□□□ 0.12
LINC01398-201ENST00000416581 Q9Y3F1 56 aa15.79■□□□□ 0.12
LINC01398-201ENST00000416581 ARVCFO00192 962 aa15.78■□□□□ 0.12
LINC01398-201ENST00000416581 RANBP6O60518 1105 aaKnown RBP15.78■□□□□ 0.12
LINC01398-201ENST00000416581 MFAP1P55081 439 aaKnown RBP15.78■□□□□ 0.12
LINC01398-201ENST00000416581 TNFAIP2Q03169 654 aa15.78■□□□□ 0.12
LINC01398-201ENST00000416581 MFSD5Q6N075 450 aa15.78■□□□□ 0.12
LINC01398-201ENST00000416581 LENG1Q96BZ8 264 aaPredicted RBP15.78■□□□□ 0.12
LINC01398-201ENST00000416581 TRERF1Q96PN7 1200 aa15.78■□□□□ 0.12
LINC01398-201ENST00000416581 AP5M1Q9H0R1 490 aa15.78■□□□□ 0.12
LINC01398-201ENST00000416581 SEMA6BQ9H3T3 888 aa15.78■□□□□ 0.12
LINC01398-201ENST00000416581 PCDHB15Q9Y5E8 787 aa15.78■□□□□ 0.12
LINC01398-201ENST00000416581 SALL3Q9BXA9 1300 aa15.77■□□□□ 0.12
LINC01398-201ENST00000416581 ICAM1P05362 532 aa15.77■□□□□ 0.12
LINC01398-201ENST00000416581 ALAS1P13196 640 aa15.77■□□□□ 0.12
LINC01398-201ENST00000416581 MCCP23508 829 aa15.77■□□□□ 0.12
LINC01398-201ENST00000416581 NOVP48745 357 aa15.77■□□□□ 0.12
LINC01398-201ENST00000416581 CDK7P50613 346 aa15.77■□□□□ 0.12
LINC01398-201ENST00000416581 IQSEC1Q6DN90 963 aa15.77■□□□□ 0.12
LINC01398-201ENST00000416581 NOL8Q76FK4 1167 aaKnown RBP15.77■□□□□ 0.12
LINC01398-201ENST00000416581 FGD4Q96M96 766 aa15.77■□□□□ 0.12
LINC01398-201ENST00000416581 FAM161BQ96MY7 647 aa15.77■□□□□ 0.12
LINC01398-201ENST00000416581 CDX2Q99626 313 aaPredicted RBP15.77■□□□□ 0.12
LINC01398-201ENST00000416581 VTA1Q9NP79 307 aa15.77■□□□□ 0.12
LINC01398-201ENST00000416581 CCPG1Q9ULG6 757 aa15.77■□□□□ 0.12
LINC01398-201ENST00000416581 PRR12Q9ULL5 1215 aa15.77■□□□□ 0.12
LINC01398-201ENST00000416581 LRRC37A2A6NM11 1700 aa15.77■□□□□ 0.11
LINC01398-201ENST00000416581 ZNF536O15090 1300 aa15.76■□□□□ 0.11
LINC01398-201ENST00000416581 B4DLN1 442 aa15.76■□□□□ 0.11
LINC01398-201ENST00000416581 FGRP09769 529 aa15.76■□□□□ 0.11
LINC01398-201ENST00000416581 TOP1P11387 765 aaKnown RBP15.76■□□□□ 0.11
LINC01398-201ENST00000416581 FOSL2P15408 326 aa15.76■□□□□ 0.11
LINC01398-201ENST00000416581 MRPL12P52815 198 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms