RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 GMCL1Q96IK5 515 aa19.82■□□□□ 0.76
SCAMP4-204ENST00000414057 SLC38A10Q9HBR0 1119 aa19.82■□□□□ 0.76
SCAMP4-204ENST00000414057 KBTBD13C9JR72 458 aa19.81■□□□□ 0.76
SCAMP4-204ENST00000414057 FOXP2O15409 715 aa19.81■□□□□ 0.76
SCAMP4-204ENST00000414057 ORC4O43929 436 aa19.81■□□□□ 0.76
SCAMP4-204ENST00000414057 IKQ13123 557 aaPredicted RBP19.81■□□□□ 0.76
SCAMP4-204ENST00000414057 ZMYND8Q9ULU4 1186 aaPredicted RBP19.81■□□□□ 0.76
SCAMP4-204ENST00000414057 CNPY2Q9Y2B0 182 aa19.81■□□□□ 0.76
SCAMP4-204ENST00000414057 PARP14Q460N5 1801 aa19.81■□□□□ 0.76
SCAMP4-204ENST00000414057 TMEM232C9JQI7 657 aa19.8■□□□□ 0.76
SCAMP4-204ENST00000414057 FGAP02671 866 aa19.8■□□□□ 0.76
SCAMP4-204ENST00000414057 FGRP09769 529 aa19.8■□□□□ 0.76
SCAMP4-204ENST00000414057 PCP11498 1178 aaKnown RBP19.8■□□□□ 0.76
SCAMP4-204ENST00000414057 BMP8BP34820 402 aa19.8■□□□□ 0.76
SCAMP4-204ENST00000414057 SLC4A3P48751 1232 aa19.8■□□□□ 0.76
SCAMP4-204ENST00000414057 PRAMEF19Q5SWL8 479 aa19.8■□□□□ 0.76
SCAMP4-204ENST00000414057 RASEFQ8IZ41 740 aa19.8■□□□□ 0.76
SCAMP4-204ENST00000414057 CHST13Q8NET6 341 aa19.8■□□□□ 0.76
SCAMP4-204ENST00000414057 TOMM22Q9NS69 142 aa19.8■□□□□ 0.76
SCAMP4-204ENST00000414057 PLA2G6O60733 806 aa19.79■□□□□ 0.76
SCAMP4-204ENST00000414057 RARBP10826 455 aa19.79■□□□□ 0.76
SCAMP4-204ENST00000414057 LRRC26Q2I0M4 334 aa19.79■□□□□ 0.76
SCAMP4-204ENST00000414057 ANKRD35Q8N283 1001 aa19.79■□□□□ 0.76
SCAMP4-204ENST00000414057 STAG1Q8WVM7 1258 aa19.79■□□□□ 0.76
SCAMP4-204ENST00000414057 GDF15Q99988 308 aa19.79■□□□□ 0.76
SCAMP4-204ENST00000414057 RAVER2Q9HCJ3 691 aaKnown RBP19.79■□□□□ 0.76
SCAMP4-204ENST00000414057 RIPK3Q9Y572 518 aa19.79■□□□□ 0.76
SCAMP4-204ENST00000414057 NEK4P51957 841 aa19.79■□□□□ 0.76
SCAMP4-204ENST00000414057 GJC2Q5T442 439 aaPredicted RBP19.79■□□□□ 0.76
SCAMP4-204ENST00000414057 RCSD1Q6JBY9 416 aa19.79■□□□□ 0.76
SCAMP4-204ENST00000414057 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.79■□□□□ 0.76
SCAMP4-204ENST00000414057 IL17RBQ9NRM6 502 aa19.79■□□□□ 0.76
SCAMP4-204ENST00000414057 SYNGAP1Q96PV0 1343 aa19.78■□□□□ 0.76
SCAMP4-204ENST00000414057 K7ELQ4 463 aaPredicted RBP19.78■□□□□ 0.76
SCAMP4-204ENST00000414057 MYCNP04198 464 aaPredicted RBP19.78■□□□□ 0.76
SCAMP4-204ENST00000414057 AKR1A1P14550 325 aa19.78■□□□□ 0.76
SCAMP4-204ENST00000414057 SYN1P17600 705 aa19.78■□□□□ 0.76
SCAMP4-204ENST00000414057 IMMTQ16891 758 aaKnown RBP19.78■□□□□ 0.76
SCAMP4-204ENST00000414057 ANO1Q5XXA6 986 aa19.78■□□□□ 0.76
SCAMP4-204ENST00000414057 ZNF467Q7Z7K2 595 aaPredicted RBP19.78■□□□□ 0.76
SCAMP4-204ENST00000414057 RNF41Q9H4P4 317 aaPredicted RBP19.78■□□□□ 0.76
SCAMP4-204ENST00000414057 PRKAG2Q9UGJ0 569 aa19.78■□□□□ 0.76
SCAMP4-204ENST00000414057 COL11A1P12107 1806 aaPredicted RBP19.77■□□□□ 0.76
SCAMP4-204ENST00000414057 NT5C2P49902 561 aa19.77■□□□□ 0.76
SCAMP4-204ENST00000414057 RRP12Q5JTH9 1297 aaKnown RBP19.77■□□□□ 0.76
SCAMP4-204ENST00000414057 MAMDC4Q6UXC1 1216 aa19.77■□□□□ 0.76
SCAMP4-204ENST00000414057 RNF180Q86T96 592 aa19.77■□□□□ 0.76
SCAMP4-204ENST00000414057 ZSWIM6Q9HCJ5 1215 aa19.77■□□□□ 0.76
SCAMP4-204ENST00000414057 INCENPQ9NQS7 918 aa19.77■□□□□ 0.76
SCAMP4-204ENST00000414057 TCP11L1Q9NUJ3 509 aa19.77■□□□□ 0.76
SCAMP4-204ENST00000414057 CYP46A1Q9Y6A2 500 aa19.77■□□□□ 0.76
SCAMP4-204ENST00000414057 MYH4Q9Y623 1939 aa19.76■□□□□ 0.75
SCAMP4-204ENST00000414057 DNAJC25-GNG10A0A024R161 153 aa19.76■□□□□ 0.75
SCAMP4-204ENST00000414057 CYP21A2P08686 494 aa19.76■□□□□ 0.75
SCAMP4-204ENST00000414057 HMGB1P09429 215 aaKnown RBP19.76■□□□□ 0.75
SCAMP4-204ENST00000414057 NOVP48745 357 aa19.76■□□□□ 0.75
SCAMP4-204ENST00000414057 TKFCQ3LXA3 575 aa19.76■□□□□ 0.75
SCAMP4-204ENST00000414057 MFSD6Q6ZSS7 791 aa19.76■□□□□ 0.75
SCAMP4-204ENST00000414057 DCAF4Q8WV16 495 aa19.76■□□□□ 0.75
SCAMP4-204ENST00000414057 JAKMIP1Q96N16 626 aaKnown RBP19.76■□□□□ 0.75
SCAMP4-204ENST00000414057 XPNPEP3Q9NQH7 507 aa19.76■□□□□ 0.75
SCAMP4-204ENST00000414057 LAMA4Q16363 1823 aa19.76■□□□□ 0.75
SCAMP4-204ENST00000414057 NMT2O60551 498 aa19.75■□□□□ 0.75
SCAMP4-204ENST00000414057 CASTP20810 708 aaKnown RBP19.75■□□□□ 0.75
SCAMP4-204ENST00000414057 MAGEA10P43363 369 aaPredicted RBP19.75■□□□□ 0.75
SCAMP4-204ENST00000414057 ATN1P54259 1190 aaPredicted RBP19.75■□□□□ 0.75
SCAMP4-204ENST00000414057 LRRC41Q15345 812 aa19.75■□□□□ 0.75
SCAMP4-204ENST00000414057 KCTD1Q719H9 257 aa19.75■□□□□ 0.75
SCAMP4-204ENST00000414057 RUFY3Q7L099 469 aa19.75■□□□□ 0.75
SCAMP4-204ENST00000414057 ACAD9Q9H845 621 aa19.75■□□□□ 0.75
SCAMP4-204ENST00000414057 FAM184BQ9ULE4 1060 aa19.75■□□□□ 0.75
SCAMP4-204ENST00000414057 ZNF213O14771 459 aa19.74■□□□□ 0.75
SCAMP4-204ENST00000414057 ZNF865P0CJ78 1059 aaPredicted RBP19.74■□□□□ 0.75
SCAMP4-204ENST00000414057 TOP1P11387 765 aaKnown RBP19.74■□□□□ 0.75
SCAMP4-204ENST00000414057 CCDC96Q2M329 555 aa19.74■□□□□ 0.75
SCAMP4-204ENST00000414057 AKNAD1Q5T1N1 836 aa19.74■□□□□ 0.75
SCAMP4-204ENST00000414057 TTC14Q96N46 770 aa19.74■□□□□ 0.75
SCAMP4-204ENST00000414057 LBHD1Q9BQE6 289 aaPredicted RBP19.74■□□□□ 0.75
SCAMP4-204ENST00000414057 ALDH8A1Q9H2A2 487 aaPredicted RBP19.74■□□□□ 0.75
SCAMP4-204ENST00000414057 CEP290O15078 2479 aa19.74■□□□□ 0.75
SCAMP4-204ENST00000414057 FRMPD3Q5JV73 1810 aa19.74■□□□□ 0.75
SCAMP4-204ENST00000414057 ALPK3Q96L96 1907 aa19.74■□□□□ 0.75
SCAMP4-204ENST00000414057 ADCK5Q3MIX3 580 aa19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 BLOC1S2Q6QNY1 142 aa19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 SLC39A5Q6ZMH5 540 aa19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 ESR2Q92731 530 aa19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 UBE2OQ9C0C9 1292 aaKnown RBP19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 HOMER2Q9NSB8 354 aa19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 ZHX1Q9UKY1 873 aaPredicted RBP19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 POTEB2H3BUK9 544 aa19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 CD2BP2O95400 341 aaKnown RBP19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 ADCYAP1R1P41586 468 aa19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 RTP1P59025 263 aa19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 HAND2P61296 217 aa19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 TDHQ8IZJ6 230 aa19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 NEK1Q96PY6 1258 aa19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 UPF3BQ9BZI7 483 aaKnown RBP19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 ABHD16BQ9H3Z7 469 aa19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 RNF146Q9NTX7 359 aa19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 PRR12Q9ULL5 1215 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms