RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 CCPG1Q9ULG6 757 aa11.96□□□□□ -0.49
NCKIPSD-202ENST00000413374 ZMYND8Q9ULU4 1186 aaPredicted RBP11.96□□□□□ -0.49
NCKIPSD-202ENST00000413374 DIS3Q9Y2L1 958 aaKnown RBP11.96□□□□□ -0.49
NCKIPSD-202ENST00000413374 DDX49Q9Y6V7 483 aaKnown RBP11.96□□□□□ -0.49
NCKIPSD-202ENST00000413374 PFASO15067 1338 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 DNAJC25-GNG10A0A024R161 153 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 POTEB2H3BUK9 544 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 SGSM2O43147 1006 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 MSCO60682 206 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 PLA2G6O60733 806 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 SNAI1O95863 264 aaPredicted RBP11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 ZNF865P0CJ78 1059 aaPredicted RBP11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 ZNF543Q08ER8 600 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 NSMFQ6X4W1 530 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 CYB5R4Q7L1T6 521 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 CENPQQ7L2Z9 268 aaPredicted RBP11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 CHST3Q7LGC8 479 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 DGKHQ86XP1 1220 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 FERMT2Q96AC1 680 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 LENG1Q96BZ8 264 aaPredicted RBP11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 PURBQ96QR8 312 aaKnown RBP11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 KRT23Q9C075 422 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 VAT1LQ9HCJ6 419 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 ZHX1Q9UKY1 873 aaPredicted RBP11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 CNPY2Q9Y2B0 182 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 TAF6LQ9Y6J9 622 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 MYH8P13535 1937 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 RLFQ13129 1914 aa11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 GREB1LQ9C091 1923 aaPredicted RBP11.95□□□□□ -0.5
NCKIPSD-202ENST00000413374 TNKSO95271 1327 aa11.94□□□□□ -0.5
NCKIPSD-202ENST00000413374 PGK1P00558 417 aa11.94□□□□□ -0.5
NCKIPSD-202ENST00000413374 CYP21A2P08686 494 aa11.94□□□□□ -0.5
NCKIPSD-202ENST00000413374 LRRC26Q2I0M4 334 aa11.94□□□□□ -0.5
NCKIPSD-202ENST00000413374 HABP4Q5JVS0 413 aaKnown RBP11.94□□□□□ -0.5
NCKIPSD-202ENST00000413374 BTNL9Q6UXG8 535 aa11.94□□□□□ -0.5
NCKIPSD-202ENST00000413374 ENAHQ8N8S7 591 aaPredicted RBP11.94□□□□□ -0.5
NCKIPSD-202ENST00000413374 ARRDC4Q8NCT1 418 aa11.94□□□□□ -0.5
NCKIPSD-202ENST00000413374 PNMA1Q8ND90 353 aa11.94□□□□□ -0.5
NCKIPSD-202ENST00000413374 FGD4Q96M96 766 aa11.94□□□□□ -0.5
NCKIPSD-202ENST00000413374 UBAC1Q9BSL1 405 aa11.94□□□□□ -0.5
NCKIPSD-202ENST00000413374 RANBP17Q9H2T7 1088 aaKnown RBP11.94□□□□□ -0.5
NCKIPSD-202ENST00000413374 CNNM2Q9H8M5 875 aa11.94□□□□□ -0.5
NCKIPSD-202ENST00000413374 A1CFQ9NQ94 594 aaKnown RBP11.94□□□□□ -0.5
NCKIPSD-202ENST00000413374 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
NCKIPSD-202ENST00000413374 RBBP6Q7Z6E9 1792 aaKnown RBP11.94□□□□□ -0.5
NCKIPSD-202ENST00000413374 RAD50Q92878 1312 aa11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 SOWAHBA6NEL2 793 aa11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 KBTBD13C9JR72 458 aa11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 ICAM1P05362 532 aa11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 RARBP10826 455 aa11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 COL6A1P12109 1028 aa11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 ADCYAP1R1P41586 468 aa11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 IRX5P78411 483 aaPredicted RBP11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 TRDNQ13061 729 aa11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 ACVR2BQ13705 512 aa11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 LRRC41Q15345 812 aa11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 TKFCQ3LXA3 575 aa11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 CCDC178Q5BJE1 867 aa11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 IFIT1BQ5T764 474 aaKnown RBP11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 CCDC144CPQ8IYA2 1237 aa11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 XPNPEP3Q9NQH7 507 aa11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 FAM184BQ9ULE4 1060 aa11.93□□□□□ -0.5
NCKIPSD-202ENST00000413374 A0A0G2JMZ2 1700 aa11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 E7EWF7 191 aa11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 DNM1LO00429 736 aa11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 NFIBO00712 420 aa11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 IFIT3O14879 490 aaKnown RBP11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 DHX16O60231 1041 aaKnown RBP11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 SNHG28P0DPA3 235 aa11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 BAATQ14032 418 aaPredicted RBP11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 USH1GQ495M9 461 aa11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 KIAA1211Q6ZU35 1233 aa11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 STOX1Q6ZVD7 989 aa11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 ARMCX2Q7L311 632 aa11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 EEPD1Q7L9B9 569 aa11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 FAM133AQ8N9E0 248 aa11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 ANKS1AQ92625 1134 aa11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 MAP4K1Q92918 833 aa11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 CCDC136Q96JN2 1154 aa11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 SENP2Q9HC62 589 aa11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 CYP39A1Q9NYL5 469 aa11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 RBM27Q9P2N5 1060 aaKnown RBP11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 RBM8AQ9Y5S9 174 aaKnown RBP11.92□□□□□ -0.5
NCKIPSD-202ENST00000413374 PTPDC1A2A3K4 754 aa11.91□□□□□ -0.5
NCKIPSD-202ENST00000413374 AKR1A1P14550 325 aa11.91□□□□□ -0.5
NCKIPSD-202ENST00000413374 CALML3P27482 149 aa11.91□□□□□ -0.5
NCKIPSD-202ENST00000413374 GPATCH4Q5T3I0 446 aaKnown RBP11.91□□□□□ -0.5
NCKIPSD-202ENST00000413374 MAMDC4Q6UXC1 1216 aa11.91□□□□□ -0.5
NCKIPSD-202ENST00000413374 SLC39A5Q6ZMH5 540 aa11.91□□□□□ -0.5
NCKIPSD-202ENST00000413374 NOL8Q76FK4 1167 aaKnown RBP11.91□□□□□ -0.5
NCKIPSD-202ENST00000413374 ZNF467Q7Z7K2 595 aaPredicted RBP11.91□□□□□ -0.5
NCKIPSD-202ENST00000413374 RALYLQ86SE5 291 aaKnown RBP11.91□□□□□ -0.5
NCKIPSD-202ENST00000413374 ADGRF4Q8IZF3 695 aa11.91□□□□□ -0.5
NCKIPSD-202ENST00000413374 STAG2Q8N3U4 1231 aa11.91□□□□□ -0.5
NCKIPSD-202ENST00000413374 ESYT1Q9BSJ8 1104 aa11.91□□□□□ -0.5
NCKIPSD-202ENST00000413374 NRBP1Q9UHY1 535 aa11.91□□□□□ -0.5
NCKIPSD-202ENST00000413374 ATP11BQ9Y2G3 1177 aa11.91□□□□□ -0.5
NCKIPSD-202ENST00000413374 SYNGAP1Q96PV0 1343 aa11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms