RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 TREML2Q5T2D2 321 aa17.43■□□□□ 0.38
PUDP-202ENST00000412827 SMCR8Q8TEV9 937 aaPredicted RBP17.43■□□□□ 0.38
PUDP-202ENST00000412827 CHURC1Q8WUH1 139 aa17.43■□□□□ 0.38
PUDP-202ENST00000412827 SPZ1Q9BXG8 430 aa17.43■□□□□ 0.38
PUDP-202ENST00000412827 MAD2L2Q9UI95 211 aa17.43■□□□□ 0.38
PUDP-202ENST00000412827 FEM1BQ9UK73 627 aa17.43■□□□□ 0.38
PUDP-202ENST00000412827 CA12O43570 354 aa17.42■□□□□ 0.38
PUDP-202ENST00000412827 TRAK2O60296 914 aa17.42■□□□□ 0.38
PUDP-202ENST00000412827 PLA2G6O60733 806 aa17.42■□□□□ 0.38
PUDP-202ENST00000412827 FDX1P10109 184 aa17.42■□□□□ 0.38
PUDP-202ENST00000412827 ZNF543Q08ER8 600 aa17.42■□□□□ 0.38
PUDP-202ENST00000412827 TAF1CQ15572 869 aaPredicted RBP17.42■□□□□ 0.38
PUDP-202ENST00000412827 KRT40Q6A162 431 aa17.42■□□□□ 0.38
PUDP-202ENST00000412827 SLF1Q9BQI6 1058 aa17.42■□□□□ 0.38
PUDP-202ENST00000412827 SH3GLB2Q9NR46 395 aa17.42■□□□□ 0.38
PUDP-202ENST00000412827 CTDP1Q9Y5B0 961 aaPredicted RBP17.42■□□□□ 0.38
PUDP-202ENST00000412827 IGF2BP3O00425 579 aaKnown RBP eCLIP17.41■□□□□ 0.38
PUDP-202ENST00000412827 DGKZQ13574 1117 aa17.41■□□□□ 0.38
PUDP-202ENST00000412827 COG2Q14746 738 aa17.41■□□□□ 0.38
PUDP-202ENST00000412827 KLHL40Q2TBA0 621 aa17.41■□□□□ 0.38
PUDP-202ENST00000412827 GPAT2Q6NUI2 795 aa17.41■□□□□ 0.38
PUDP-202ENST00000412827 CATSPERGQ6ZRH7 1159 aa17.41■□□□□ 0.38
PUDP-202ENST00000412827 FAM43AQ8N2R8 423 aa17.41■□□□□ 0.38
PUDP-202ENST00000412827 SRBD1Q8N5C6 995 aaKnown RBP17.41■□□□□ 0.38
PUDP-202ENST00000412827 ZFYVE28Q9HCC9 887 aa17.41■□□□□ 0.38
PUDP-202ENST00000412827 SAGE1Q9NXZ1 904 aa17.41■□□□□ 0.38
PUDP-202ENST00000412827 HOXC10Q9NYD6 342 aa17.41■□□□□ 0.38
PUDP-202ENST00000412827 TMEM232C9JQI7 657 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 hCG_1984214I3L0E3 225 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 PLEKHA8P1O95397 391 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 MMP1P03956 469 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 U2AF2P26368 475 aaKnown RBP eCLIP17.4■□□□□ 0.38
PUDP-202ENST00000412827 GCLCP48506 637 aaPredicted RBP17.4■□□□□ 0.38
PUDP-202ENST00000412827 DNM1Q05193 864 aaKnown RBP17.4■□□□□ 0.38
PUDP-202ENST00000412827 PFKFB3Q16875 520 aaPredicted RBP17.4■□□□□ 0.38
PUDP-202ENST00000412827 GALNT17Q6IS24 598 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 KCTD1Q719H9 257 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 FERMT3Q86UX7 667 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 ZNF713Q8N859 430 aaPredicted RBP17.4■□□□□ 0.38
PUDP-202ENST00000412827 MB21D1Q8N884 522 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 PRPF38AQ8NAV1 312 aaKnown RBP17.4■□□□□ 0.38
PUDP-202ENST00000412827 ZIC5Q96T25 663 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 NUP88Q99567 741 aaPredicted RBP17.4■□□□□ 0.38
PUDP-202ENST00000412827 PTPN18Q99952 460 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 ASCC2Q9H1I8 757 aaPredicted RBP17.4■□□□□ 0.38
PUDP-202ENST00000412827 FOXP1Q9H334 677 aaPredicted RBP17.4■□□□□ 0.38
PUDP-202ENST00000412827 PNMA2Q9UL42 364 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 PPP1R9AQ9ULJ8 1098 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 V9GY48 417 aaPredicted RBP17.4■□□□□ 0.38
PUDP-202ENST00000412827 FRMPD2Q68DX3 1309 aaPredicted RBP17.4■□□□□ 0.38
PUDP-202ENST00000412827 KLRF2D3W0D1 207 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 PRPF40AO75400 957 aaKnown RBP17.4■□□□□ 0.38
PUDP-202ENST00000412827 SCG2P13521 617 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 PKN1Q16512 942 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 KIAA1755Q5JYT7 1200 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 BRMS1Q9HCU9 246 aa17.4■□□□□ 0.38
PUDP-202ENST00000412827 CALML3P27482 149 aa17.39■□□□□ 0.37
PUDP-202ENST00000412827 UBE2HP62256 183 aa17.39■□□□□ 0.37
PUDP-202ENST00000412827 HERVK_113P62684 666 aa17.39■□□□□ 0.37
PUDP-202ENST00000412827 SYDE2Q5VT97 1194 aa17.39■□□□□ 0.37
PUDP-202ENST00000412827 BTNL9Q6UXG8 535 aa17.39■□□□□ 0.37
PUDP-202ENST00000412827 LBX2Q6XYB7 198 aa17.39■□□□□ 0.37
PUDP-202ENST00000412827 KIFC2Q96AC6 838 aa17.39■□□□□ 0.37
PUDP-202ENST00000412827 GPCPD1Q9NPB8 672 aa17.39■□□□□ 0.37
PUDP-202ENST00000412827 CNPY2Q9Y2B0 182 aa17.39■□□□□ 0.37
PUDP-202ENST00000412827 DTNBO60941 627 aa17.38■□□□□ 0.37
PUDP-202ENST00000412827 ZBED4O75132 1171 aa17.38■□□□□ 0.37
PUDP-202ENST00000412827 DSG3P32926 999 aa17.38■□□□□ 0.37
PUDP-202ENST00000412827 GNL2Q13823 731 aaKnown RBP17.38■□□□□ 0.37
PUDP-202ENST00000412827 CCDC82Q8N4S0 544 aa17.38■□□□□ 0.37
PUDP-202ENST00000412827 CCDC148Q8NFR7 591 aa17.38■□□□□ 0.37
PUDP-202ENST00000412827 CCDC12Q8WUD4 166 aaPredicted RBP17.38■□□□□ 0.37
PUDP-202ENST00000412827 CFHR5Q9BXR6 569 aa17.38■□□□□ 0.37
PUDP-202ENST00000412827 RIOX1Q9H6W3 641 aa17.38■□□□□ 0.37
PUDP-202ENST00000412827 DDX49Q9Y6V7 483 aaKnown RBP17.38■□□□□ 0.37
PUDP-202ENST00000412827 SPDYE16A6NNV3 312 aaPredicted RBP17.37■□□□□ 0.37
PUDP-202ENST00000412827 GOLGA8HP0CJ92 632 aa17.37■□□□□ 0.37
PUDP-202ENST00000412827 CYP2C8P10632 490 aa17.37■□□□□ 0.37
PUDP-202ENST00000412827 COPB2P35606 906 aa17.37■□□□□ 0.37
PUDP-202ENST00000412827 GUCY1B3Q02153 619 aa17.37■□□□□ 0.37
PUDP-202ENST00000412827 TRAF1Q13077 416 aa17.37■□□□□ 0.37
PUDP-202ENST00000412827 SAMD1Q6SPF0 538 aaPredicted RBP17.37■□□□□ 0.37
PUDP-202ENST00000412827 STAG2Q8N3U4 1231 aa17.37■□□□□ 0.37
PUDP-202ENST00000412827 DNAJC5GQ8N7S2 189 aa17.37■□□□□ 0.37
PUDP-202ENST00000412827 RRP36Q96EU6 259 aaKnown RBP17.37■□□□□ 0.37
PUDP-202ENST00000412827 PHF20Q9BVI0 1012 aa17.37■□□□□ 0.37
PUDP-202ENST00000412827 POLR3EQ9NVU0 708 aa17.37■□□□□ 0.37
PUDP-202ENST00000412827 RCOR1Q9UKL0 485 aa17.37■□□□□ 0.37
PUDP-202ENST00000412827 TLR2O60603 784 aa17.36■□□□□ 0.37
PUDP-202ENST00000412827 PPFIA3O75145 1194 aa17.36■□□□□ 0.37
PUDP-202ENST00000412827 YEATS4O95619 227 aa17.36■□□□□ 0.37
PUDP-202ENST00000412827 OAZ1P54368 228 aa17.36■□□□□ 0.37
PUDP-202ENST00000412827 CCNA1P78396 465 aa17.36■□□□□ 0.37
PUDP-202ENST00000412827 CRHR2Q13324 411 aa17.36■□□□□ 0.37
PUDP-202ENST00000412827 MYSM1Q5VVJ2 828 aa17.36■□□□□ 0.37
PUDP-202ENST00000412827 RASGRP2Q7LDG7 609 aa17.36■□□□□ 0.37
PUDP-202ENST00000412827 CMTR1Q8N1G2 835 aaKnown RBP17.36■□□□□ 0.37
PUDP-202ENST00000412827 SPATA32Q96LK8 384 aa17.36■□□□□ 0.37
PUDP-202ENST00000412827 AIFM3Q96NN9 605 aa17.36■□□□□ 0.37
PUDP-202ENST00000412827 P2RX7Q99572 595 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms