RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 PI4K2BQ8TCG2 481 aa6.88□□□□□ -1.31
LINC00342-201ENST00000412393 ASAP3Q8TDY4 903 aa6.88□□□□□ -1.31
LINC00342-201ENST00000412393 PNNQ9H307 717 aaKnown RBP6.88□□□□□ -1.31
LINC00342-201ENST00000412393 MBNL3Q9NUK0 354 aaKnown RBP6.88□□□□□ -1.31
LINC00342-201ENST00000412393 ZMIZ1Q9ULJ6 1067 aa6.88□□□□□ -1.31
LINC00342-201ENST00000412393 DLEC1Q9Y238 1755 aa6.87□□□□□ -1.31
LINC00342-201ENST00000412393 MAPK8IP3Q9UPT6 1336 aa6.87□□□□□ -1.31
LINC00342-201ENST00000412393 POLRMTO00411 1230 aaKnown RBP6.87□□□□□ -1.31
LINC00342-201ENST00000412393 A1BGP04217 495 aa6.87□□□□□ -1.31
LINC00342-201ENST00000412393 RNASE1P07998 156 aaKnown RBP6.87□□□□□ -1.31
LINC00342-201ENST00000412393 IL6STP40189 918 aaPredicted RBP6.87□□□□□ -1.31
LINC00342-201ENST00000412393 ASPAP45381 313 aa6.87□□□□□ -1.31
LINC00342-201ENST00000412393 EHHADHQ08426 723 aa6.87□□□□□ -1.31
LINC00342-201ENST00000412393 NFIXQ14938 502 aa6.87□□□□□ -1.31
LINC00342-201ENST00000412393 TAF7Q15545 349 aaPredicted RBP6.87□□□□□ -1.31
LINC00342-201ENST00000412393 NFE2L2Q16236 605 aa6.87□□□□□ -1.31
LINC00342-201ENST00000412393 NPM2Q86SE8 214 aaKnown RBP6.87□□□□□ -1.31
LINC00342-201ENST00000412393 SNX29Q8TEQ0 813 aa6.87□□□□□ -1.31
LINC00342-201ENST00000412393 EDEM1Q92611 657 aa6.87□□□□□ -1.31
LINC00342-201ENST00000412393 CLP1Q92989 425 aaKnown RBP6.87□□□□□ -1.31
LINC00342-201ENST00000412393 PLEKHF1Q96S99 279 aa6.87□□□□□ -1.31
LINC00342-201ENST00000412393 RAD18Q9NS91 495 aa6.87□□□□□ -1.31
LINC00342-201ENST00000412393 FAM105AQ9NUU6 356 aa6.87□□□□□ -1.31
LINC00342-201ENST00000412393 SBF1O95248 1867 aa6.87□□□□□ -1.31
LINC00342-201ENST00000412393 CACNA1SQ13698 1873 aa6.87□□□□□ -1.31
LINC00342-201ENST00000412393 ANKRD31Q8N7Z5 1873 aa6.87□□□□□ -1.31
LINC00342-201ENST00000412393 MYBBP1AQ9BQG0 1328 aaKnown RBP6.86□□□□□ -1.31
LINC00342-201ENST00000412393 UTRNP46939 3433 aa6.86□□□□□ -1.31
LINC00342-201ENST00000412393 NUP98P52948 1817 aa6.86□□□□□ -1.31
LINC00342-201ENST00000412393 TSPAN15O95858 294 aa6.86□□□□□ -1.31
LINC00342-201ENST00000412393 PDGFAP04085 211 aa6.86□□□□□ -1.31
LINC00342-201ENST00000412393 SERPINB2P05120 415 aa6.86□□□□□ -1.31
LINC00342-201ENST00000412393 SNRPA1P09661 255 aaKnown RBP6.86□□□□□ -1.31
LINC00342-201ENST00000412393 CD8BP10966 210 aa6.86□□□□□ -1.31
LINC00342-201ENST00000412393 MAOBP27338 520 aa6.86□□□□□ -1.31
LINC00342-201ENST00000412393 RAP1GAPP47736 663 aa6.86□□□□□ -1.31
LINC00342-201ENST00000412393 POU4F3Q15319 338 aa6.86□□□□□ -1.31
LINC00342-201ENST00000412393 C8orf34Q49A92 452 aa6.86□□□□□ -1.31
LINC00342-201ENST00000412393 LILRA6Q6PI73 481 aa6.86□□□□□ -1.31
LINC00342-201ENST00000412393 CLEC4MQ9H2X3 399 aaPredicted RBP6.86□□□□□ -1.31
LINC00342-201ENST00000412393 MIS18AQ9NYP9 233 aa6.86□□□□□ -1.31
LINC00342-201ENST00000412393 USP16Q9Y5T5 823 aa6.86□□□□□ -1.31
LINC00342-201ENST00000412393 GOLGB1Q14789 3259 aaKnown RBP6.86□□□□□ -1.31
LINC00342-201ENST00000412393 ATP10DQ9P241 1426 aa6.85□□□□□ -1.31
LINC00342-201ENST00000412393 NCANO14594 1321 aa6.85□□□□□ -1.31
LINC00342-201ENST00000412393 PRAMEF22A3QJZ6 481 aa6.85□□□□□ -1.31
LINC00342-201ENST00000412393 LRRC10BA6NIK2 292 aa6.85□□□□□ -1.31
LINC00342-201ENST00000412393 PHACTR2O75167 634 aa6.85□□□□□ -1.31
LINC00342-201ENST00000412393 KCNA3P22001 575 aa6.85□□□□□ -1.31
LINC00342-201ENST00000412393 CHRNA5P30532 468 aa6.85□□□□□ -1.31
LINC00342-201ENST00000412393 PIP4K2AP48426 406 aaPredicted RBP6.85□□□□□ -1.31
LINC00342-201ENST00000412393 DNM1Q05193 864 aaKnown RBP6.85□□□□□ -1.31
LINC00342-201ENST00000412393 NOM1Q5C9Z4 860 aaKnown RBP6.85□□□□□ -1.31
LINC00342-201ENST00000412393 DALRD3Q5D0E6 543 aaKnown RBP6.85□□□□□ -1.31
LINC00342-201ENST00000412393 TBC1D9BQ66K14 1250 aa6.85□□□□□ -1.31
LINC00342-201ENST00000412393 ALKBH2Q6NS38 261 aa6.85□□□□□ -1.31
LINC00342-201ENST00000412393 SLC23A3Q6PIS1 610 aa6.85□□□□□ -1.31
LINC00342-201ENST00000412393 ARHGAP27Q6ZUM4 889 aa6.85□□□□□ -1.31
LINC00342-201ENST00000412393 CILP2Q8IUL8 1156 aa6.85□□□□□ -1.31
LINC00342-201ENST00000412393 PNISRQ8TF01 805 aaKnown RBP6.85□□□□□ -1.31
LINC00342-201ENST00000412393 ADCY9O60503 1353 aa6.84□□□□□ -1.31
LINC00342-201ENST00000412393 PRRG2O14669 202 aa6.84□□□□□ -1.31
LINC00342-201ENST00000412393 CAMTA2O94983 1202 aa6.84□□□□□ -1.31
LINC00342-201ENST00000412393 USP5P45974 858 aa6.84□□□□□ -1.31
LINC00342-201ENST00000412393 BNIP3Q12983 259 aa6.84□□□□□ -1.31
LINC00342-201ENST00000412393 IFI16Q16666 785 aaKnown RBP6.84□□□□□ -1.31
LINC00342-201ENST00000412393 ATCAYQ86WG3 371 aa6.84□□□□□ -1.31
LINC00342-201ENST00000412393 LRRN4CLQ8ND94 238 aa6.84□□□□□ -1.31
LINC00342-201ENST00000412393 HELQQ8TDG4 1101 aa6.84□□□□□ -1.31
LINC00342-201ENST00000412393 STK32AQ8WU08 396 aa6.84□□□□□ -1.31
LINC00342-201ENST00000412393 THUMPD2Q9BTF0 503 aaKnown RBP6.84□□□□□ -1.31
LINC00342-201ENST00000412393 AP4E1Q9UPM8 1137 aa6.84□□□□□ -1.31
LINC00342-201ENST00000412393 DAGLAQ9Y4D2 1042 aa6.84□□□□□ -1.31
LINC00342-201ENST00000412393 COL11A2P13942 1736 aaPredicted RBP6.84□□□□□ -1.31
LINC00342-201ENST00000412393 CARMIL3Q8ND23 1372 aa6.83□□□□□ -1.32
LINC00342-201ENST00000412393 TMEM265A0A087WTH1 108 aa6.83□□□□□ -1.32
LINC00342-201ENST00000412393 EREGO14944 169 aa6.83□□□□□ -1.32
LINC00342-201ENST00000412393 ANP32CO43423 234 aa6.83□□□□□ -1.32
LINC00342-201ENST00000412393 TNFRSF21O75509 655 aa6.83□□□□□ -1.32
LINC00342-201ENST00000412393 TMPOP42166 694 aaKnown RBP6.83□□□□□ -1.32
LINC00342-201ENST00000412393 RIPK4P57078 832 aa6.83□□□□□ -1.32
LINC00342-201ENST00000412393 C1QTNF8P60827 252 aa6.83□□□□□ -1.32
LINC00342-201ENST00000412393 EIF4A1P60842 406 aaKnown RBP6.83□□□□□ -1.32
LINC00342-201ENST00000412393 HNRNPUQ00839 825 aaKnown RBP eCLIP6.83□□□□□ -1.32
LINC00342-201ENST00000412393 PCDH1Q08174 1060 aa6.83□□□□□ -1.32
LINC00342-201ENST00000412393 WDR43Q15061 677 aaKnown RBP eCLIP6.83□□□□□ -1.32
LINC00342-201ENST00000412393 ANGEL2Q5VTE6 544 aaKnown RBP6.83□□□□□ -1.32
LINC00342-201ENST00000412393 ZSWIM9Q86XI8 627 aa6.83□□□□□ -1.32
LINC00342-201ENST00000412393 ZNF526Q8TF50 670 aaPredicted RBP6.83□□□□□ -1.32
LINC00342-201ENST00000412393 SETDB2Q96T68 719 aa6.83□□□□□ -1.32
LINC00342-201ENST00000412393 CORO1BQ9BR76 489 aa6.83□□□□□ -1.32
LINC00342-201ENST00000412393 PRKRIP1Q9H875 184 aaPredicted RBP6.83□□□□□ -1.32
LINC00342-201ENST00000412393 ADAMTS6Q9UKP5 1117 aa6.83□□□□□ -1.32
LINC00342-201ENST00000412393 DICER1Q9UPY3 1922 aaKnown RBP6.83□□□□□ -1.32
LINC00342-201ENST00000412393 ARFGEF2Q9Y6D5 1785 aa6.82□□□□□ -1.32
LINC00342-201ENST00000412393 FER1L6Q2WGJ9 1857 aa6.82□□□□□ -1.32
LINC00342-201ENST00000412393 H0YIN7 160 aa6.82□□□□□ -1.32
LINC00342-201ENST00000412393 NPHP1O15259 732 aa6.82□□□□□ -1.32
LINC00342-201ENST00000412393 ATG7O95352 703 aa6.82□□□□□ -1.32
LINC00342-201ENST00000412393 LMOD3Q0VAK6 560 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms