RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 PIK3AP1Q6ZUJ8 805 aa13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 KRT25Q7Z3Z0 450 aa13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 CCDC84Q86UT8 332 aaPredicted RBP13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 FAM160B2Q86V87 743 aa13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 LDHDQ86WU2 507 aa13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 ZC3H15Q8WU90 426 aaKnown RBP13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 CHURC1Q8WUH1 139 aa13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 TNFRSF25Q93038 417 aa13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 MYH7BA7E2Y1 1941 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 TRIM75PA6NK02 468 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 ADM5C9JUS6 153 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 PPP6R2O75170 966 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 ATP2B1P20020 1258 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 USP14P54578 494 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 GSE1Q14687 1217 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 TTC38Q5R3I4 469 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 NOL9Q5SY16 702 aaKnown RBP13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 CCDC183Q5T5S1 534 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 CCDC73Q6ZRK6 1079 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 KRT26Q7Z3Y9 468 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 LPAR1Q92633 364 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 COA7Q96BR5 231 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 PGBD1Q96JS3 809 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 KIAA1683Q9H0B3 1180 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 GLT8D2Q9H1C3 349 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 FEM1BQ9UK73 627 aa13.29□□□□□ -0.28
SNRNP35-202ENST00000412157 FAM205CA6NFA0 338 aa13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 TMEM88BA6NKF7 163 aa13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 WDR46O15213 610 aaKnown RBP13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 PPP1R12BO60237 982 aaPredicted RBP13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 PLA2G6O60733 806 aa13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 CTCFP49711 727 aaPredicted RBP13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 TOB1P50616 345 aaPredicted RBP13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 PTPAQ15257 358 aa13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 ADALQ6DHV7 355 aa13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 PNMA8AQ86V59 439 aaPredicted RBP13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 FBXO11Q86XK2 927 aa13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 CCAR1Q8IX12 1150 aaKnown RBP13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 REXO1Q8N1G1 1221 aaKnown RBP13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 MRPS27Q92552 414 aaKnown RBP13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 CUL5Q93034 780 aa13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 WDR18Q9BV38 432 aa13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 AMNQ9BXJ7 453 aa13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 GLIS2Q9BZE0 524 aaPredicted RBP13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 TAF1DQ9H5J8 278 aaPredicted RBP13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 DDX19AQ9NUU7 478 aaKnown RBP13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 TMEM63CQ9P1W3 806 aa13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 PRR12Q9ULL5 1215 aa13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 PCDHA7Q9UN72 937 aa13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 PCDHA6Q9UN73 950 aa13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 PCDHA8Q9Y5H6 950 aa13.28□□□□□ -0.28
SNRNP35-202ENST00000412157 COL11A1P12107 1806 aaPredicted RBP13.27□□□□□ -0.28
SNRNP35-202ENST00000412157 A0A1W2PQ27 194 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 A0A1W2PQ64 194 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 A0A1W2PQD8 194 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 M0R2N6 131 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 CUTAO60888 179 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 LETM1O95202 739 aaPredicted RBP13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 PTPRAP18433 802 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 IREB2P48200 963 aaKnown RBP13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 VEGFBP49765 207 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 MRPL12P52815 198 aaKnown RBP13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 PRKG1Q13976 671 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 NONOQ15233 471 aaKnown RBP eCLIP13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 ZSCAN23Q3MJ62 389 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 KIAA1755Q5JYT7 1200 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 FSIP1Q8NA03 581 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 RASGRP4Q8TDF6 673 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 ZKSCAN4Q969J2 545 aaPredicted RBP13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 PRDM10Q9NQV6 1147 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 PCDHB6Q9Y5E3 794 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 PCDHA1Q9Y5I3 950 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 CSADQ9Y600 493 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 PASKQ96RG2 1323 aa13.27□□□□□ -0.29
SNRNP35-202ENST00000412157 LOC285556D6RIA3 1793 aa13.26□□□□□ -0.29
SNRNP35-202ENST00000412157 PPP1R11O60927 126 aaPredicted RBP13.26□□□□□ -0.29
SNRNP35-202ENST00000412157 USP2O75604 605 aaPredicted RBP13.26□□□□□ -0.29
SNRNP35-202ENST00000412157 LIG1P18858 919 aa13.26□□□□□ -0.29
SNRNP35-202ENST00000412157 MARCKSP29966 332 aaPredicted RBP13.26□□□□□ -0.29
SNRNP35-202ENST00000412157 MTMR2Q13614 643 aa13.26□□□□□ -0.29
SNRNP35-202ENST00000412157 EARS2Q5JPH6 523 aaKnown RBP13.26□□□□□ -0.29
SNRNP35-202ENST00000412157 KRI1Q8N9T8 703 aaKnown RBP13.26□□□□□ -0.29
SNRNP35-202ENST00000412157 ZNF280CQ8ND82 737 aa13.26□□□□□ -0.29
SNRNP35-202ENST00000412157 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.26□□□□□ -0.29
SNRNP35-202ENST00000412157 KIFC2Q96AC6 838 aa13.26□□□□□ -0.29
SNRNP35-202ENST00000412157 CDCA5Q96FF9 252 aa13.26□□□□□ -0.29
SNRNP35-202ENST00000412157 NUP62CLQ9H1M0 184 aa13.26□□□□□ -0.29
SNRNP35-202ENST00000412157 RIC8AQ9NPQ8 531 aa13.26□□□□□ -0.29
SNRNP35-202ENST00000412157 MORC2Q9Y6X9 1032 aaPredicted RBP13.26□□□□□ -0.29
SNRNP35-202ENST00000412157 SMCHD1A6NHR9 2005 aa13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 C19orf81C9J6K1 198 aa13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 LBX1P52954 281 aa13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 ZNF445P59923 1031 aa13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 MAP3K9P80192 1104 aa13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 SPP2Q13103 211 aa13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 TTLL12Q14166 644 aaPredicted RBP13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 USH1GQ495M9 461 aa13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 NOM1Q5C9Z4 860 aaKnown RBP13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 JAKMIP3Q5VZ66 844 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms