RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 OVOL3O00110 214 aa4.59□□□□□ -1.67
HMGB3P2-201ENST00000411913 MATN3O15232 486 aa4.59□□□□□ -1.67
HMGB3P2-201ENST00000411913 RAD51AP2Q09MP3 1159 aa4.59□□□□□ -1.67
HMGB3P2-201ENST00000411913 VWA3BQ502W6 1294 aa4.59□□□□□ -1.67
HMGB3P2-201ENST00000411913 ZNF526Q8TF50 670 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P2-201ENST00000411913 DUSP9Q99956 384 aaKnown RBP4.59□□□□□ -1.67
HMGB3P2-201ENST00000411913 BRD1O95696 1058 aa4.58□□□□□ -1.68
HMGB3P2-201ENST00000411913 ITGB3P05106 788 aa4.58□□□□□ -1.68
HMGB3P2-201ENST00000411913 HMGA2P52926 109 aa4.58□□□□□ -1.68
HMGB3P2-201ENST00000411913 GJA9P57773 515 aa4.58□□□□□ -1.68
HMGB3P2-201ENST00000411913 CPZQ66K79 652 aa4.58□□□□□ -1.68
HMGB3P2-201ENST00000411913 SAPCD2Q86UD0 394 aa4.58□□□□□ -1.68
HMGB3P2-201ENST00000411913 RELL1Q8IUW5 271 aa4.58□□□□□ -1.68
HMGB3P2-201ENST00000411913 NAT16Q8N8M0 369 aa4.58□□□□□ -1.68
HMGB3P2-201ENST00000411913 SORCS2Q96PQ0 1159 aa4.58□□□□□ -1.68
HMGB3P2-201ENST00000411913 JMJD8Q96S16 334 aa4.58□□□□□ -1.68
HMGB3P2-201ENST00000411913 ARID3AQ99856 593 aa4.58□□□□□ -1.68
HMGB3P2-201ENST00000411913 AP5S1Q9NUS5 200 aa4.58□□□□□ -1.68
HMGB3P2-201ENST00000411913 DUSP10Q9Y6W6 482 aa4.58□□□□□ -1.68
HMGB3P2-201ENST00000411913 SH3D21A4FU49 640 aa4.57□□□□□ -1.68
HMGB3P2-201ENST00000411913 CLEC3AO75596 197 aa4.57□□□□□ -1.68
HMGB3P2-201ENST00000411913 PLA2G1BP04054 148 aaKnown RBP4.57□□□□□ -1.68
HMGB3P2-201ENST00000411913 GBP2P32456 591 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P2-201ENST00000411913 BMP8BP34820 402 aa4.57□□□□□ -1.68
HMGB3P2-201ENST00000411913 ST13P50502 369 aaKnown RBP4.57□□□□□ -1.68
HMGB3P2-201ENST00000411913 MVKQ03426 396 aa4.57□□□□□ -1.68
HMGB3P2-201ENST00000411913 SNAP47Q5SQN1 464 aa4.57□□□□□ -1.68
HMGB3P2-201ENST00000411913 BICRALQ6AI39 1079 aa4.57□□□□□ -1.68
HMGB3P2-201ENST00000411913 PAQR3Q6TCH7 311 aa4.57□□□□□ -1.68
HMGB3P2-201ENST00000411913 JAMLQ86YT9 394 aa4.57□□□□□ -1.68
HMGB3P2-201ENST00000411913 LOXL4Q96JB6 756 aa4.57□□□□□ -1.68
HMGB3P2-201ENST00000411913 ZNF512BQ96KM6 892 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P2-201ENST00000411913 RNF19AQ9NV58 838 aa4.57□□□□□ -1.68
HMGB3P2-201ENST00000411913 DBR1Q9UK59 544 aaKnown RBP4.57□□□□□ -1.68
HMGB3P2-201ENST00000411913 FBXL21Q9UKT6 434 aa4.57□□□□□ -1.68
HMGB3P2-201ENST00000411913 NOBOXO60393 691 aa4.56□□□□□ -1.68
HMGB3P2-201ENST00000411913 ZNF205O95201 554 aa4.56□□□□□ -1.68
HMGB3P2-201ENST00000411913 CYBBP04839 570 aa4.56□□□□□ -1.68
HMGB3P2-201ENST00000411913 ATF2P15336 505 aa4.56□□□□□ -1.68
HMGB3P2-201ENST00000411913 VAV1P15498 845 aa4.56□□□□□ -1.68
HMGB3P2-201ENST00000411913 FAM160A1Q05DH4 1040 aa4.56□□□□□ -1.68
HMGB3P2-201ENST00000411913 MPP2Q14168 576 aa4.56□□□□□ -1.68
HMGB3P2-201ENST00000411913 HLA-DQA1Q5Y7H0 255 aa4.56□□□□□ -1.68
HMGB3P2-201ENST00000411913 REC114Q7Z4M0 266 aa4.56□□□□□ -1.68
HMGB3P2-201ENST00000411913 HOMEZQ8IX15 550 aa4.56□□□□□ -1.68
HMGB3P2-201ENST00000411913 CARFQ8N187 725 aa4.56□□□□□ -1.68
HMGB3P2-201ENST00000411913 C8orf49Q96NF6 230 aa4.56□□□□□ -1.68
HMGB3P2-201ENST00000411913 LNPKQ9C0E8 428 aa4.56□□□□□ -1.68
HMGB3P2-201ENST00000411913 ANTXR1Q9H6X2 564 aa4.56□□□□□ -1.68
HMGB3P2-201ENST00000411913 GFOD1Q9NXC2 390 aa4.56□□□□□ -1.68
HMGB3P2-201ENST00000411913 F8W031 263 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 TLR3O15455 904 aaKnown RBP4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 DBHP09172 617 aa4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 NCAM1P13591 858 aa4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 ZNF20P17024 532 aa4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 POLR2BP30876 1174 aaKnown RBP4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 GDF5P43026 501 aa4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 PRR5P85299 388 aa4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 PSMD2Q13200 908 aa4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 GOLM1Q8NBJ4 401 aa4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 TMEM52Q8NDY8 209 aa4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 CHST13Q8NET6 341 aa4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 FBXO27Q8NI29 283 aa4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 TMEM74Q96NL1 305 aa4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 MKRN2Q9H000 416 aaKnown RBP4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 RNF38Q9H0F5 515 aa4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 GMIPQ9P107 970 aa4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 PCDHB12Q9Y5F1 795 aa4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 HCFC2Q9Y5Z7 792 aa4.55□□□□□ -1.68
HMGB3P2-201ENST00000411913 MINDY4BA8MYZ0 360 aa4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 C1QTNF3-AMACRE9PGA6 284 aa4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 GSTM1P09488 218 aa4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 C6P13671 934 aa4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 FBLN1P23142 703 aa4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 CEBPAP49715 358 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 HTRA3P83110 453 aa4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 PWP1Q13610 501 aa4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 CWF19L2Q2TBE0 894 aaKnown RBP4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 EAPPQ56P03 285 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 CRTC3Q6UUV7 619 aa4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 USP48Q86UV5 1035 aa4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 RHOVQ96L33 236 aa4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 SAMD11Q96NU1 681 aa4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 RBM15Q96T37 977 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 MRIQ9BWK5 157 aa4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 PCDHB14Q9Y5E9 798 aa4.54□□□□□ -1.68
HMGB3P2-201ENST00000411913 USP31Q70CQ4 1352 aa4.53□□□□□ -1.68
HMGB3P2-201ENST00000411913 SRGAP3O43295 1099 aa4.53□□□□□ -1.68
HMGB3P2-201ENST00000411913 CTSKP43235 329 aa4.53□□□□□ -1.68
HMGB3P2-201ENST00000411913 SARSP49591 514 aaKnown RBP4.53□□□□□ -1.68
HMGB3P2-201ENST00000411913 KRTAP1-1Q07627 177 aa4.53□□□□□ -1.68
HMGB3P2-201ENST00000411913 CWF19L1Q69YN2 538 aaKnown RBP4.53□□□□□ -1.68
HMGB3P2-201ENST00000411913 ALG3Q92685 438 aa4.53□□□□□ -1.68
HMGB3P2-201ENST00000411913 DSCC1Q9BVC3 393 aa4.53□□□□□ -1.68
HMGB3P2-201ENST00000411913 SCAND2PQ9GZW5 306 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P2-201ENST00000411913 PDLIM7Q9NR12 457 aa4.53□□□□□ -1.68
HMGB3P2-201ENST00000411913 NTMQ9P121 344 aa4.53□□□□□ -1.68
HMGB3P2-201ENST00000411913 PARP2Q9UGN5 583 aa4.53□□□□□ -1.68
HMGB3P2-201ENST00000411913 PLA2G2DQ9UNK4 145 aa4.53□□□□□ -1.68
HMGB3P2-201ENST00000411913 IVNS1ABPQ9Y6Y0 642 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms