RNA–Protein interactions for RNA: ENST00000409908.5

MDH1-203, Transcript of malate dehydrogenase 1, humanhuman

TSL 3 BASIC

Gene MDH1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-203ENST00000409908 PTCH2Q9Y6C5 1203 aa12.64□□□□□ -0.39
MDH1-203ENST00000409908 COL11A1P12107 1806 aaPredicted RBP12.64□□□□□ -0.39
MDH1-203ENST00000409908 RLFQ13129 1914 aa12.64□□□□□ -0.39
MDH1-203ENST00000409908 BAZ2BQ9UIF8 2168 aaKnown RBP12.63□□□□□ -0.39
MDH1-203ENST00000409908 CCDC69A6NI79 296 aa12.63□□□□□ -0.39
MDH1-203ENST00000409908 SH2B2O14492 632 aaPredicted RBP12.63□□□□□ -0.39
MDH1-203ENST00000409908 PARP1P09874 1014 aaKnown RBP12.63□□□□□ -0.39
MDH1-203ENST00000409908 FLT3LGP49771 235 aa12.63□□□□□ -0.39
MDH1-203ENST00000409908 STAT2P52630 851 aa12.63□□□□□ -0.39
MDH1-203ENST00000409908 ZNF543Q08ER8 600 aa12.63□□□□□ -0.39
MDH1-203ENST00000409908 APOBRQ0VD83 1088 aa12.63□□□□□ -0.39
MDH1-203ENST00000409908 SART3Q15020 963 aaKnown RBP12.63□□□□□ -0.39
MDH1-203ENST00000409908 FAM110CQ1W6H9 321 aa12.63□□□□□ -0.39
MDH1-203ENST00000409908 TSGA10IPQ3SY00 556 aa12.63□□□□□ -0.39
MDH1-203ENST00000409908 SYDE2Q5VT97 1194 aa12.63□□□□□ -0.39
MDH1-203ENST00000409908 BLOC1S2Q6QNY1 142 aa12.63□□□□□ -0.39
MDH1-203ENST00000409908 KCNB2Q92953 911 aa12.63□□□□□ -0.39
MDH1-203ENST00000409908 GMCL1Q96IK5 515 aa12.63□□□□□ -0.39
MDH1-203ENST00000409908 UPF3BQ9BZI7 483 aaKnown RBP12.63□□□□□ -0.39
MDH1-203ENST00000409908 SPATC1LQ9H0A9 340 aa12.63□□□□□ -0.39
MDH1-203ENST00000409908 HOMER2Q9NSB8 354 aa12.63□□□□□ -0.39
MDH1-203ENST00000409908 BRPF3Q9ULD4 1205 aa12.63□□□□□ -0.39
MDH1-203ENST00000409908 PTPN22Q9Y2R2 807 aa12.63□□□□□ -0.39
MDH1-203ENST00000409908 MGAMO43451 1857 aa12.63□□□□□ -0.39
MDH1-203ENST00000409908 PPFIA3O75145 1194 aa12.62□□□□□ -0.39
MDH1-203ENST00000409908 ALAS1P13196 640 aa12.62□□□□□ -0.39
MDH1-203ENST00000409908 HOXD10P28358 340 aa12.62□□□□□ -0.39
MDH1-203ENST00000409908 KRT32Q14532 448 aa12.62□□□□□ -0.39
MDH1-203ENST00000409908 SNRNP48Q6IEG0 339 aaKnown RBP12.62□□□□□ -0.39
MDH1-203ENST00000409908 NOL8Q76FK4 1167 aaKnown RBP12.62□□□□□ -0.39
MDH1-203ENST00000409908 GPR142Q7Z601 462 aa12.62□□□□□ -0.39
MDH1-203ENST00000409908 PLEKHH3Q7Z736 793 aa12.62□□□□□ -0.39
MDH1-203ENST00000409908 CATIPQ7Z7H3 387 aa12.62□□□□□ -0.39
MDH1-203ENST00000409908 NBPF11Q86T75 865 aa12.62□□□□□ -0.39
MDH1-203ENST00000409908 FAM160B2Q86V87 743 aa12.62□□□□□ -0.39
MDH1-203ENST00000409908 RAET1EQ8TD07 263 aa12.62□□□□□ -0.39
MDH1-203ENST00000409908 SH3TC2Q8TF17 1288 aa12.62□□□□□ -0.39
MDH1-203ENST00000409908 COA7Q96BR5 231 aa12.62□□□□□ -0.39
MDH1-203ENST00000409908 HS3ST6Q96QI5 342 aa12.62□□□□□ -0.39
MDH1-203ENST00000409908 BIN2Q9UBW5 565 aaPredicted RBP12.62□□□□□ -0.39
MDH1-203ENST00000409908 ADAMTS5Q9UNA0 930 aa12.62□□□□□ -0.39
MDH1-203ENST00000409908 ZNFX1Q9P2E3 1918 aaKnown RBP12.62□□□□□ -0.39
MDH1-203ENST00000409908 MYPNQ86TC9 1320 aa12.62□□□□□ -0.39
MDH1-203ENST00000409908 hCG_1642624A0A1W2PR95 340 aa12.61□□□□□ -0.39
MDH1-203ENST00000409908 CCDC85CA6NKD9 419 aa12.61□□□□□ -0.39
MDH1-203ENST00000409908 KLRF2D3W0D1 207 aa12.61□□□□□ -0.39
MDH1-203ENST00000409908 ELNP15502 786 aa12.61□□□□□ -0.39
MDH1-203ENST00000409908 RPS6KB1P23443 525 aa12.61□□□□□ -0.39
MDH1-203ENST00000409908 ARHGEF6Q15052 776 aa12.61□□□□□ -0.39
MDH1-203ENST00000409908 NOM1Q5C9Z4 860 aaKnown RBP12.61□□□□□ -0.39
MDH1-203ENST00000409908 ADGRF4Q8IZF3 695 aa12.61□□□□□ -0.39
MDH1-203ENST00000409908 ZNF654Q8IZM8 581 aa12.61□□□□□ -0.39
MDH1-203ENST00000409908 REPS2Q8NFH8 660 aa12.61□□□□□ -0.39
MDH1-203ENST00000409908 TMEM87BQ96K49 555 aa12.61□□□□□ -0.39
MDH1-203ENST00000409908 KRTAP3-3Q9BYR6 98 aa12.61□□□□□ -0.39
MDH1-203ENST00000409908 KRTAP3-2Q9BYR7 98 aa12.61□□□□□ -0.39
MDH1-203ENST00000409908 SRRDQ9UH36 339 aa12.61□□□□□ -0.39
MDH1-203ENST00000409908 MAD2L2Q9UI95 211 aa12.61□□□□□ -0.39
MDH1-203ENST00000409908 GJD2Q9UKL4 321 aa12.61□□□□□ -0.39
MDH1-203ENST00000409908 KLF18A0A0U1RQI7 1052 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 FAM205CA6NFA0 338 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 PGK2P07205 417 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 SNHG28P0DPA3 235 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 PTPREP23469 700 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 PSMA5P28066 241 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 CCT2P78371 535 aaKnown RBP12.6□□□□□ -0.39
MDH1-203ENST00000409908 CCNA1P78396 465 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 TRIM32Q13049 653 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 CCL14Q16627 93 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 SLC35G1Q2M3R5 365 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 USH1GQ495M9 461 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 SYNE3Q6ZMZ3 975 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 HOMER1Q86YM7 354 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 NPLOC4Q8TAT6 608 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 TBC1D5Q92609 795 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 BRF1Q92994 677 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 SLC38A10Q9HBR0 1119 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 PDRG1Q9NUG6 133 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 ZNF214Q9UL59 606 aaPredicted RBP12.6□□□□□ -0.39
MDH1-203ENST00000409908 HPS5Q9UPZ3 1129 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 SLC12A7Q9Y666 1083 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 ZNF536O15090 1300 aa12.6□□□□□ -0.39
MDH1-203ENST00000409908 PALM3A6NDB9 673 aaPredicted RBP12.59□□□□□ -0.39
MDH1-203ENST00000409908 COBLO75128 1261 aa12.59□□□□□ -0.39
MDH1-203ENST00000409908 MAPK4P31152 587 aa12.59□□□□□ -0.39
MDH1-203ENST00000409908 TROAPQ12815 778 aa12.59□□□□□ -0.39
MDH1-203ENST00000409908 STK3Q13188 491 aa12.59□□□□□ -0.39
MDH1-203ENST00000409908 GRM4Q14833 912 aa12.59□□□□□ -0.39
MDH1-203ENST00000409908 MUM1L1Q5H9M0 696 aa12.59□□□□□ -0.39
MDH1-203ENST00000409908 FBXO46Q6PJ61 603 aaPredicted RBP12.59□□□□□ -0.39
MDH1-203ENST00000409908 BTNL9Q6UXG8 535 aa12.59□□□□□ -0.39
MDH1-203ENST00000409908 RUFY3Q7L099 469 aa12.59□□□□□ -0.39
MDH1-203ENST00000409908 DPP9Q86TI2 863 aa12.59□□□□□ -0.39
MDH1-203ENST00000409908 MICU3Q86XE3 530 aa12.59□□□□□ -0.39
MDH1-203ENST00000409908 RIOX2Q8IUF8 465 aa12.59□□□□□ -0.39
MDH1-203ENST00000409908 TMTC2Q8N394 836 aa12.59□□□□□ -0.39
MDH1-203ENST00000409908 GTF3C2Q8WUA4 911 aaPredicted RBP12.59□□□□□ -0.39
MDH1-203ENST00000409908 TRERF1Q96PN7 1200 aa12.59□□□□□ -0.39
MDH1-203ENST00000409908 PURBQ96QR8 312 aaKnown RBP12.59□□□□□ -0.39
MDH1-203ENST00000409908 PIGSQ96S52 555 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms