RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 TROAPQ12815 778 aa16.3■□□□□ 0.2
MINDY4-202ENST00000409881 ANKRD13AQ8IZ07 590 aa16.3■□□□□ 0.2
MINDY4-202ENST00000409881 SMC1BQ8NDV3 1235 aa16.3■□□□□ 0.2
MINDY4-202ENST00000409881 DDX11Q96FC9 970 aa16.3■□□□□ 0.2
MINDY4-202ENST00000409881 CLMNQ96JQ2 1002 aa16.3■□□□□ 0.2
MINDY4-202ENST00000409881 ELP3Q9H9T3 547 aa16.3■□□□□ 0.2
MINDY4-202ENST00000409881 GBA2Q9HCG7 927 aaPredicted RBP16.3■□□□□ 0.2
MINDY4-202ENST00000409881 OTOFQ9HC10 1997 aa16.3■□□□□ 0.2
MINDY4-202ENST00000409881 BMS1Q14692 1282 aaKnown RBP16.29■□□□□ 0.2
MINDY4-202ENST00000409881 ZYXQ15942 572 aaKnown RBP16.29■□□□□ 0.2
MINDY4-202ENST00000409881 RTN1Q16799 776 aa16.29■□□□□ 0.2
MINDY4-202ENST00000409881 ZHX2Q9Y6X8 837 aa16.29■□□□□ 0.2
MINDY4-202ENST00000409881 MYH4Q9Y623 1939 aa16.29■□□□□ 0.2
MINDY4-202ENST00000409881 BECN2A8MW95 431 aa16.29■□□□□ 0.2
MINDY4-202ENST00000409881 TULP2O00295 520 aa16.29■□□□□ 0.2
MINDY4-202ENST00000409881 CALM1P0DP23 149 aa16.29■□□□□ 0.2
MINDY4-202ENST00000409881 CALM2P0DP24 149 aa16.29■□□□□ 0.2
MINDY4-202ENST00000409881 CALM3P0DP25 149 aa16.29■□□□□ 0.2
MINDY4-202ENST00000409881 CYP2C19P33261 490 aa16.29■□□□□ 0.2
MINDY4-202ENST00000409881 HNRNPH2P55795 449 aaKnown RBP16.29■□□□□ 0.2
MINDY4-202ENST00000409881 C2orf69Q8N8R5 385 aa16.29■□□□□ 0.2
MINDY4-202ENST00000409881 FANCBQ8NB91 859 aa16.29■□□□□ 0.2
MINDY4-202ENST00000409881 MKL1Q969V6 931 aa16.29■□□□□ 0.2
MINDY4-202ENST00000409881 CTCFLQ8NI51 663 aaPredicted RBP16.28■□□□□ 0.2
MINDY4-202ENST00000409881 SH2D4AQ9H788 454 aa16.28■□□□□ 0.2
MINDY4-202ENST00000409881 FHOD1Q9Y613 1164 aa16.28■□□□□ 0.2
MINDY4-202ENST00000409881 PAPPA2Q9BXP8 1791 aa16.28■□□□□ 0.2
MINDY4-202ENST00000409881 JAK2O60674 1132 aa16.28■□□□□ 0.2
MINDY4-202ENST00000409881 H2AFXP16104 143 aaPredicted RBP16.28■□□□□ 0.2
MINDY4-202ENST00000409881 CDC27P30260 824 aa16.28■□□□□ 0.2
MINDY4-202ENST00000409881 RCAN1P53805 252 aa16.28■□□□□ 0.2
MINDY4-202ENST00000409881 AS3MTQ9HBK9 375 aa16.28■□□□□ 0.2
MINDY4-202ENST00000409881 TMX2Q9Y320 296 aa16.28■□□□□ 0.2
MINDY4-202ENST00000409881 TRIM75PA6NK02 468 aa16.27■□□□□ 0.2
MINDY4-202ENST00000409881 CPLX1O14810 134 aa16.27■□□□□ 0.2
MINDY4-202ENST00000409881 PPFIA3O75145 1194 aa16.27■□□□□ 0.2
MINDY4-202ENST00000409881 CAVIN2O95810 425 aa16.27■□□□□ 0.2
MINDY4-202ENST00000409881 PDIA4P13667 645 aaKnown RBP16.27■□□□□ 0.2
MINDY4-202ENST00000409881 ADD1P35611 737 aaKnown RBP16.27■□□□□ 0.2
MINDY4-202ENST00000409881 CLCN6P51797 869 aa16.27■□□□□ 0.2
MINDY4-202ENST00000409881 SPP2Q13103 211 aa16.27■□□□□ 0.2
MINDY4-202ENST00000409881 SNW1Q13573 536 aaKnown RBP16.27■□□□□ 0.2
MINDY4-202ENST00000409881 CST9Q5W186 159 aa16.27■□□□□ 0.2
MINDY4-202ENST00000409881 SLFN13Q68D06 897 aa16.27■□□□□ 0.2
MINDY4-202ENST00000409881 CNKSR2Q8WXI2 1034 aa16.27■□□□□ 0.2
MINDY4-202ENST00000409881 F5H6K3 240 aa16.27■□□□□ 0.19
MINDY4-202ENST00000409881 TOMM70O94826 608 aa16.27■□□□□ 0.19
MINDY4-202ENST00000409881 GOLGA8HP0CJ92 632 aa16.27■□□□□ 0.19
MINDY4-202ENST00000409881 PDHBP11177 359 aa16.27■□□□□ 0.19
MINDY4-202ENST00000409881 FKBP1BP68106 108 aa16.27■□□□□ 0.19
MINDY4-202ENST00000409881 KLRC3Q07444 240 aa16.27■□□□□ 0.19
MINDY4-202ENST00000409881 GRM4Q14833 912 aa16.27■□□□□ 0.19
MINDY4-202ENST00000409881 STX1AQ16623 288 aa16.27■□□□□ 0.19
MINDY4-202ENST00000409881 USP17L2Q6R6M4 530 aa16.27■□□□□ 0.19
MINDY4-202ENST00000409881 SPICE1Q8N0Z3 855 aa16.27■□□□□ 0.19
MINDY4-202ENST00000409881 ZNF280CQ8ND82 737 aa16.27■□□□□ 0.19
MINDY4-202ENST00000409881 GOPCQ9HD26 462 aa16.27■□□□□ 0.19
MINDY4-202ENST00000409881 FRMPD2Q68DX3 1309 aaPredicted RBP16.26■□□□□ 0.19
MINDY4-202ENST00000409881 DHX16O60231 1041 aaKnown RBP16.26■□□□□ 0.19
MINDY4-202ENST00000409881 NDUFB10O96000 172 aa16.26■□□□□ 0.19
MINDY4-202ENST00000409881 PARP1P09874 1014 aaKnown RBP16.26■□□□□ 0.19
MINDY4-202ENST00000409881 KIF5BP33176 963 aa16.26■□□□□ 0.19
MINDY4-202ENST00000409881 MTMR2Q13614 643 aa16.26■□□□□ 0.19
MINDY4-202ENST00000409881 CCDC96Q2M329 555 aa16.26■□□□□ 0.19
MINDY4-202ENST00000409881 LDLRAD1Q5T700 205 aa16.26■□□□□ 0.19
MINDY4-202ENST00000409881 SYT10Q6XYQ8 523 aa16.26■□□□□ 0.19
MINDY4-202ENST00000409881 DHX40Q8IX18 779 aaKnown RBP16.26■□□□□ 0.19
MINDY4-202ENST00000409881 CMTR1Q8N1G2 835 aaKnown RBP16.26■□□□□ 0.19
MINDY4-202ENST00000409881 GMCL1P1Q8NEA9 526 aa16.26■□□□□ 0.19
MINDY4-202ENST00000409881 RBM46Q8TBY0 533 aaKnown RBP16.26■□□□□ 0.19
MINDY4-202ENST00000409881 OTUD5Q96G74 571 aa16.26■□□□□ 0.19
MINDY4-202ENST00000409881 FAM217BQ9NTX9 383 aaPredicted RBP16.26■□□□□ 0.19
MINDY4-202ENST00000409881 NID2Q14112 1375 aa16.26■□□□□ 0.19
MINDY4-202ENST00000409881 CCDC196A0A1B0GTZ2 297 aa16.26■□□□□ 0.19
MINDY4-202ENST00000409881 ERCC4Q92889 916 aaPredicted RBP16.26■□□□□ 0.19
MINDY4-202ENST00000409881 WDR18Q9BV38 432 aa16.26■□□□□ 0.19
MINDY4-202ENST00000409881 PASKQ96RG2 1323 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 USP17L10C9JJH3 530 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 PLEKHA8P1O95397 391 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 SLC1A4P43007 532 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 PLA2G4AP47712 749 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 RESTQ13127 1097 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 STAG2Q8N3U4 1231 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 CCDC82Q8N4S0 544 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 NUP88Q99567 741 aaPredicted RBP16.25■□□□□ 0.19
MINDY4-202ENST00000409881 VCPKMTQ9H867 229 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 RBM28Q9NW13 759 aaKnown RBP16.25■□□□□ 0.19
MINDY4-202ENST00000409881 SYNPO2Q9UMS6 1093 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 PNMA6AP0CW24 399 aaPredicted RBP16.25■□□□□ 0.19
MINDY4-202ENST00000409881 FAM193AP78312 1265 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 DGKZQ13574 1117 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 ARHGAP29Q52LW3 1261 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 KIAA1755Q5JYT7 1200 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 E4F1Q66K89 784 aaPredicted RBP16.25■□□□□ 0.19
MINDY4-202ENST00000409881 KCTD1Q719H9 257 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 ERO1BQ86YB8 467 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 AOPEPQ8N6M6 819 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 SLC10A4Q96EP9 437 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 MAP3K14Q99558 947 aa16.25■□□□□ 0.19
MINDY4-202ENST00000409881 KIAA1683Q9H0B3 1180 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms