RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 CPVLQ9H3G5 476 aa16.11■□□□□ 0.17
LIMS2-206ENST00000409754 ZNF408Q9H9D4 720 aa16.11■□□□□ 0.17
LIMS2-206ENST00000409754 EEF2P13639 858 aaKnown RBP16.1■□□□□ 0.17
LIMS2-206ENST00000409754 SYKP43405 635 aa16.1■□□□□ 0.17
LIMS2-206ENST00000409754 ATP2B2Q01814 1243 aa16.1■□□□□ 0.17
LIMS2-206ENST00000409754 PIK3AP1Q6ZUJ8 805 aa16.1■□□□□ 0.17
LIMS2-206ENST00000409754 PIGSQ96S52 555 aa16.1■□□□□ 0.17
LIMS2-206ENST00000409754 UBA5Q9GZZ9 404 aa16.1■□□□□ 0.17
LIMS2-206ENST00000409754 PPP2R3BQ9Y5P8 575 aa16.1■□□□□ 0.17
LIMS2-206ENST00000409754 MYH4Q9Y623 1939 aa16.09■□□□□ 0.17
LIMS2-206ENST00000409754 ESYT2A0FGR8 921 aa16.09■□□□□ 0.17
LIMS2-206ENST00000409754 CAVIN2O95810 425 aa16.09■□□□□ 0.17
LIMS2-206ENST00000409754 HSPA6P17066 643 aa16.09■□□□□ 0.17
LIMS2-206ENST00000409754 NAPAP54920 295 aa16.09■□□□□ 0.17
LIMS2-206ENST00000409754 ICA1Q05084 483 aa16.09■□□□□ 0.17
LIMS2-206ENST00000409754 TNFAIP1Q13829 316 aa16.09■□□□□ 0.17
LIMS2-206ENST00000409754 SEPT2Q15019 361 aa16.09■□□□□ 0.17
LIMS2-206ENST00000409754 NOM1Q5C9Z4 860 aaKnown RBP16.09■□□□□ 0.17
LIMS2-206ENST00000409754 HOMER1Q86YM7 354 aa16.09■□□□□ 0.17
LIMS2-206ENST00000409754 FAM200AQ8TCP9 573 aa16.09■□□□□ 0.17
LIMS2-206ENST00000409754 DCAF4Q8WV16 495 aa16.09■□□□□ 0.17
LIMS2-206ENST00000409754 SDF4Q9BRK5 362 aa16.09■□□□□ 0.17
LIMS2-206ENST00000409754 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.09■□□□□ 0.17
LIMS2-206ENST00000409754 ADAMTS3O15072 1205 aa16.08■□□□□ 0.17
LIMS2-206ENST00000409754 GDF11O95390 407 aa16.08■□□□□ 0.17
LIMS2-206ENST00000409754 GNA11P29992 359 aa16.08■□□□□ 0.17
LIMS2-206ENST00000409754 FERMT2Q96AC1 680 aa16.08■□□□□ 0.17
LIMS2-206ENST00000409754 VAT1LQ9HCJ6 419 aa16.08■□□□□ 0.17
LIMS2-206ENST00000409754 C6orf50Q9HD87 102 aa16.08■□□□□ 0.17
LIMS2-206ENST00000409754 GPCPD1Q9NPB8 672 aa16.08■□□□□ 0.17
LIMS2-206ENST00000409754 FAM13BQ9NYF5 915 aa16.08■□□□□ 0.17
LIMS2-206ENST00000409754 SYNPO2Q9UMS6 1093 aa16.08■□□□□ 0.17
LIMS2-206ENST00000409754 PCDHA6Q9UN73 950 aa16.08■□□□□ 0.17
LIMS2-206ENST00000409754 PCDHA8Q9Y5H6 950 aa16.08■□□□□ 0.17
LIMS2-206ENST00000409754 CCDC194A0A1B0GVG4 234 aa16.08■□□□□ 0.16
LIMS2-206ENST00000409754 TBC1D12O60347 775 aa16.08■□□□□ 0.16
LIMS2-206ENST00000409754 ZNF174Q15697 407 aa16.08■□□□□ 0.16
LIMS2-206ENST00000409754 CCDC96Q2M329 555 aa16.08■□□□□ 0.16
LIMS2-206ENST00000409754 SHROOM1Q2M3G4 852 aaPredicted RBP16.08■□□□□ 0.16
LIMS2-206ENST00000409754 SIAH1Q8IUQ4 282 aa16.08■□□□□ 0.16
LIMS2-206ENST00000409754 GMCL1P1Q8NEA9 526 aa16.08■□□□□ 0.16
LIMS2-206ENST00000409754 PDLIM2Q96JY6 352 aa16.08■□□□□ 0.16
LIMS2-206ENST00000409754 KCNH3Q9ULD8 1083 aa16.08■□□□□ 0.16
LIMS2-206ENST00000409754 THSD7BQ9C0I4 1608 aa16.07■□□□□ 0.16
LIMS2-206ENST00000409754 PNMA6FA0A0J9YX94 578 aa16.07■□□□□ 0.16
LIMS2-206ENST00000409754 SMCO2A6NFE2 343 aa16.07■□□□□ 0.16
LIMS2-206ENST00000409754 TMEM88BA6NKF7 163 aa16.07■□□□□ 0.16
LIMS2-206ENST00000409754 WNT7AO00755 349 aa16.07■□□□□ 0.16
LIMS2-206ENST00000409754 ATP2C1P98194 919 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-206ENST00000409754 PRKG1Q13976 671 aa16.07■□□□□ 0.16
LIMS2-206ENST00000409754 STX1AQ16623 288 aa16.07■□□□□ 0.16
LIMS2-206ENST00000409754 ANO6Q4KMQ2 910 aa16.07■□□□□ 0.16
LIMS2-206ENST00000409754 SLFN13Q68D06 897 aa16.07■□□□□ 0.16
LIMS2-206ENST00000409754 PPP1R18Q6NYC8 613 aa16.07■□□□□ 0.16
LIMS2-206ENST00000409754 SAPCD2Q86UD0 394 aa16.07■□□□□ 0.16
LIMS2-206ENST00000409754 ELOA2Q8IYF1 753 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-206ENST00000409754 ADGRF4Q8IZF3 695 aa16.07■□□□□ 0.16
LIMS2-206ENST00000409754 MTMR8Q96EF0 704 aa16.07■□□□□ 0.16
LIMS2-206ENST00000409754 JMJD4Q9H9V9 463 aa16.07■□□□□ 0.16
LIMS2-206ENST00000409754 GBA2Q9HCG7 927 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-206ENST00000409754 GH2P01242 217 aa16.06■□□□□ 0.16
LIMS2-206ENST00000409754 SLC1A4P43007 532 aa16.06■□□□□ 0.16
LIMS2-206ENST00000409754 TNNI2P48788 182 aa16.06■□□□□ 0.16
LIMS2-206ENST00000409754 GRIN1Q05586 938 aa16.06■□□□□ 0.16
LIMS2-206ENST00000409754 RRP1BQ14684 758 aaKnown RBP16.06■□□□□ 0.16
LIMS2-206ENST00000409754 TTBK2Q6IQ55 1244 aa16.06■□□□□ 0.16
LIMS2-206ENST00000409754 KRT25Q7Z3Z0 450 aa16.06■□□□□ 0.16
LIMS2-206ENST00000409754 CREBZFQ9NS37 354 aa16.06■□□□□ 0.16
LIMS2-206ENST00000409754 KIAA1468Q9P260 1216 aa16.06■□□□□ 0.16
LIMS2-206ENST00000409754 TLL2Q9Y6L7 1015 aa16.06■□□□□ 0.16
LIMS2-206ENST00000409754 ATAD5Q96QE3 1844 aa16.06■□□□□ 0.16
LIMS2-206ENST00000409754 USP2O75604 605 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-206ENST00000409754 MAP3K10Q02779 954 aa16.05■□□□□ 0.16
LIMS2-206ENST00000409754 PTGDRQ13258 359 aa16.05■□□□□ 0.16
LIMS2-206ENST00000409754 KCTD1Q719H9 257 aa16.05■□□□□ 0.16
LIMS2-206ENST00000409754 RASGRP4Q8TDF6 673 aa16.05■□□□□ 0.16
LIMS2-206ENST00000409754 GMCL1Q96IK5 515 aa16.05■□□□□ 0.16
LIMS2-206ENST00000409754 CSRNP2Q9H175 543 aa16.05■□□□□ 0.16
LIMS2-206ENST00000409754 ANO10Q9NW15 660 aa16.05■□□□□ 0.16
LIMS2-206ENST00000409754 PHIPQ8WWQ0 1821 aa16.05■□□□□ 0.16
LIMS2-206ENST00000409754 DOCK1Q14185 1865 aa16.05■□□□□ 0.16
LIMS2-206ENST00000409754 JAG1P78504 1218 aa16.05■□□□□ 0.16
LIMS2-206ENST00000409754 ARL6IP4Q66PJ3 421 aaKnown RBP16.05■□□□□ 0.16
LIMS2-206ENST00000409754 KRBA2Q6ZNG9 492 aa16.05■□□□□ 0.16
LIMS2-206ENST00000409754 MIGA2Q7L4E1 593 aa16.05■□□□□ 0.16
LIMS2-206ENST00000409754 F5H6K3 240 aa16.04■□□□□ 0.16
LIMS2-206ENST00000409754 ZBTB5O15062 677 aa16.04■□□□□ 0.16
LIMS2-206ENST00000409754 MCM7P33993 719 aa16.04■□□□□ 0.16
LIMS2-206ENST00000409754 KLRC3Q07444 240 aa16.04■□□□□ 0.16
LIMS2-206ENST00000409754 SPECC1Q5M775 1068 aa16.04■□□□□ 0.16
LIMS2-206ENST00000409754 LDLRAD1Q5T700 205 aa16.04■□□□□ 0.16
LIMS2-206ENST00000409754 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.04■□□□□ 0.16
LIMS2-206ENST00000409754 CLMNQ96JQ2 1002 aa16.04■□□□□ 0.16
LIMS2-206ENST00000409754 DNAJC25Q9H1X3 360 aa16.04■□□□□ 0.16
LIMS2-206ENST00000409754 CBX8Q9HC52 389 aa16.04■□□□□ 0.16
LIMS2-206ENST00000409754 RASSF10A6NK89 507 aa16.03■□□□□ 0.16
LIMS2-206ENST00000409754 PHF20L1A8MW92 1017 aa16.03■□□□□ 0.16
LIMS2-206ENST00000409754 USP17L10C9JJH3 530 aa16.03■□□□□ 0.16
LIMS2-206ENST00000409754 NDUFB10O96000 172 aa16.03■□□□□ 0.16
LIMS2-206ENST00000409754 SLC16A2P36021 539 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms