RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 RASEFQ8IZ41 740 aa36.45■■■■□ 3.43
TRAF3IP1-203ENST00000409739 MCM3APO60318 1980 aa36.45■■■■□ 3.43
TRAF3IP1-203ENST00000409739 LCTP09848 1927 aa36.45■■■■□ 3.43
TRAF3IP1-203ENST00000409739 PRC1O43663 620 aa36.44■■■■□ 3.42
TRAF3IP1-203ENST00000409739 REC8O95072 547 aa36.44■■■■□ 3.42
TRAF3IP1-203ENST00000409739 PARP1P09874 1014 aaKnown RBP36.44■■■■□ 3.42
TRAF3IP1-203ENST00000409739 MCM5P33992 734 aa36.44■■■■□ 3.42
TRAF3IP1-203ENST00000409739 MAP3K21Q5TCX8 1036 aa36.44■■■■□ 3.42
TRAF3IP1-203ENST00000409739 CHST13Q8NET6 341 aa36.44■■■■□ 3.42
TRAF3IP1-203ENST00000409739 CPVLQ9H3G5 476 aa36.44■■■■□ 3.42
TRAF3IP1-203ENST00000409739 HOMER2Q9NSB8 354 aa36.44■■■■□ 3.42
TRAF3IP1-203ENST00000409739 PRKAR2AP13861 404 aaKnown RBP36.43■■■■□ 3.42
TRAF3IP1-203ENST00000409739 TSGA10IPQ3SY00 556 aa36.43■■■■□ 3.42
TRAF3IP1-203ENST00000409739 MTA3Q9BTC8 594 aa36.43■■■■□ 3.42
TRAF3IP1-203ENST00000409739 BAZ2BQ9UIF8 2168 aaKnown RBP36.43■■■■□ 3.42
TRAF3IP1-203ENST00000409739 ICAM1P05362 532 aa36.42■■■■□ 3.42
TRAF3IP1-203ENST00000409739 PGK2P07205 417 aa36.42■■■■□ 3.42
TRAF3IP1-203ENST00000409739 EN2P19622 333 aaPredicted RBP36.42■■■■□ 3.42
TRAF3IP1-203ENST00000409739 LY9Q9HBG7 655 aa36.42■■■■□ 3.42
TRAF3IP1-203ENST00000409739 PAK6Q9NQU5 681 aaPredicted RBP36.42■■■■□ 3.42
TRAF3IP1-203ENST00000409739 SLC5A4Q9NY91 659 aa36.42■■■■□ 3.42
TRAF3IP1-203ENST00000409739 FBXO40Q9UH90 709 aa36.42■■■■□ 3.42
TRAF3IP1-203ENST00000409739 MKI67P46013 3256 aaKnown RBP36.42■■■■□ 3.42
TRAF3IP1-203ENST00000409739 RPTORQ8N122 1335 aa36.41■■■■□ 3.42
TRAF3IP1-203ENST00000409739 IGHA2P01877 340 aa36.41■■■■□ 3.42
TRAF3IP1-203ENST00000409739 GJB1P08034 283 aa36.41■■■■□ 3.42
TRAF3IP1-203ENST00000409739 TAL1P17542 331 aaPredicted RBP36.41■■■■□ 3.42
TRAF3IP1-203ENST00000409739 CACNB2Q08289 660 aaPredicted RBP36.41■■■■□ 3.42
TRAF3IP1-203ENST00000409739 TKFCQ3LXA3 575 aa36.41■■■■□ 3.42
TRAF3IP1-203ENST00000409739 UBA5Q9GZZ9 404 aa36.41■■■■□ 3.42
TRAF3IP1-203ENST00000409739 XRN2Q9H0D6 950 aaKnown RBP eCLIP36.41■■■■□ 3.42
TRAF3IP1-203ENST00000409739 GPHNQ9NQX3 736 aaPredicted RBP36.41■■■■□ 3.42
TRAF3IP1-203ENST00000409739 RNF146Q9NTX7 359 aa36.41■■■■□ 3.42
TRAF3IP1-203ENST00000409739 CCPG1Q9ULG6 757 aa36.41■■■■□ 3.42
TRAF3IP1-203ENST00000409739 ALAS1P13196 640 aa36.4■■■■□ 3.42
TRAF3IP1-203ENST00000409739 OLFML2BQ68BL8 750 aa36.4■■■■□ 3.42
TRAF3IP1-203ENST00000409739 TMEM87BQ96K49 555 aa36.4■■■■□ 3.42
TRAF3IP1-203ENST00000409739 ACAD9Q9H845 621 aa36.4■■■■□ 3.42
TRAF3IP1-203ENST00000409739 HSPA4P34932 840 aa36.39■■■■□ 3.42
TRAF3IP1-203ENST00000409739 ADCK5Q3MIX3 580 aa36.39■■■■□ 3.42
TRAF3IP1-203ENST00000409739 MFSD14CQ5VZR4 134 aa36.39■■■■□ 3.42
TRAF3IP1-203ENST00000409739 STAG2Q8N3U4 1231 aa36.39■■■■□ 3.42
TRAF3IP1-203ENST00000409739 KCNB2Q92953 911 aa36.39■■■■□ 3.42
TRAF3IP1-203ENST00000409739 MAML3Q96JK9 1138 aa36.39■■■■□ 3.42
TRAF3IP1-203ENST00000409739 NEK1Q96PY6 1258 aa36.39■■■■□ 3.42
TRAF3IP1-203ENST00000409739 HMX1Q9NP08 348 aaPredicted RBP36.39■■■■□ 3.42
TRAF3IP1-203ENST00000409739 SH2B2O14492 632 aaPredicted RBP36.38■■■■□ 3.41
TRAF3IP1-203ENST00000409739 GRM4Q14833 912 aa36.38■■■■□ 3.41
TRAF3IP1-203ENST00000409739 ZNF792Q3KQV3 632 aa36.38■■■■□ 3.41
TRAF3IP1-203ENST00000409739 SHISA4Q96DD7 197 aa36.38■■■■□ 3.41
TRAF3IP1-203ENST00000409739 TRERF1Q96PN7 1200 aa36.38■■■■□ 3.41
TRAF3IP1-203ENST00000409739 MAD2L2Q9UI95 211 aa36.38■■■■□ 3.41
TRAF3IP1-203ENST00000409739 TNRC18O15417 2968 aaPredicted RBP36.38■■■■□ 3.41
TRAF3IP1-203ENST00000409739 DNAJC25-GNG10A0A024R161 153 aa36.37■■■■□ 3.41
TRAF3IP1-203ENST00000409739 GJA8P48165 433 aa36.37■■■■□ 3.41
TRAF3IP1-203ENST00000409739 TROAPQ12815 778 aa36.37■■■■□ 3.41
TRAF3IP1-203ENST00000409739 KRT32Q14532 448 aa36.37■■■■□ 3.41
TRAF3IP1-203ENST00000409739 DIS3Q9Y2L1 958 aaKnown RBP36.37■■■■□ 3.41
TRAF3IP1-203ENST00000409739 CYP2C19P33261 490 aa36.36■■■■□ 3.41
TRAF3IP1-203ENST00000409739 MUM1L1Q5H9M0 696 aa36.36■■■■□ 3.41
TRAF3IP1-203ENST00000409739 CATIPQ7Z7H3 387 aa36.36■■■■□ 3.41
TRAF3IP1-203ENST00000409739 ADGRF4Q8IZF3 695 aa36.36■■■■□ 3.41
TRAF3IP1-203ENST00000409739 ANKRD35Q8N283 1001 aa36.36■■■■□ 3.41
TRAF3IP1-203ENST00000409739 DDX11Q96FC9 970 aa36.36■■■■□ 3.41
TRAF3IP1-203ENST00000409739 DEFB118Q96PH6 123 aa36.36■■■■□ 3.41
TRAF3IP1-203ENST00000409739 LRRC2Q9BYS8 371 aa36.36■■■■□ 3.41
TRAF3IP1-203ENST00000409739 WDR19Q8NEZ3 1342 aa36.35■■■■□ 3.41
TRAF3IP1-203ENST00000409739 PALM3A6NDB9 673 aaPredicted RBP36.35■■■■□ 3.41
TRAF3IP1-203ENST00000409739 U2AF1L4Q8WU68 220 aaKnown RBP36.35■■■■□ 3.41
TRAF3IP1-203ENST00000409739 EPB41L2O43491 1005 aaKnown RBP36.34■■■■□ 3.41
TRAF3IP1-203ENST00000409739 CCND3P30281 292 aaPredicted RBP36.34■■■■□ 3.41
TRAF3IP1-203ENST00000409739 CDC37Q16543 378 aaPredicted RBP36.34■■■■□ 3.41
TRAF3IP1-203ENST00000409739 ZNF654Q8IZM8 581 aa36.34■■■■□ 3.41
TRAF3IP1-203ENST00000409739 A1CFQ9NQ94 594 aaKnown RBP36.34■■■■□ 3.41
TRAF3IP1-203ENST00000409739 SNX14Q9Y5W7 946 aa36.34■■■■□ 3.41
TRAF3IP1-203ENST00000409739 KLRF2D3W0D1 207 aa36.33■■■■□ 3.41
TRAF3IP1-203ENST00000409739 LIFRP42702 1097 aa36.33■■■■□ 3.41
TRAF3IP1-203ENST00000409739 PNMA2Q9UL42 364 aa36.33■■■■□ 3.41
TRAF3IP1-203ENST00000409739 DDAH1O94760 285 aa36.32■■■■□ 3.4
TRAF3IP1-203ENST00000409739 SGPL1O95470 568 aa36.32■■■■□ 3.4
TRAF3IP1-203ENST00000409739 MLLT1Q03111 559 aaPredicted RBP36.32■■■■□ 3.4
TRAF3IP1-203ENST00000409739 MYL10Q9BUA6 226 aa36.32■■■■□ 3.4
TRAF3IP1-203ENST00000409739 JMJD4Q9H9V9 463 aa36.32■■■■□ 3.4
TRAF3IP1-203ENST00000409739 LRRC37A2A6NM11 1700 aa36.31■■■■□ 3.4
TRAF3IP1-203ENST00000409739 DHX16O60231 1041 aaKnown RBP36.31■■■■□ 3.4
TRAF3IP1-203ENST00000409739 CYBAP13498 195 aa36.31■■■■□ 3.4
TRAF3IP1-203ENST00000409739 EXOSC10Q01780 885 aaKnown RBP36.31■■■■□ 3.4
TRAF3IP1-203ENST00000409739 NFXL1Q6ZNB6 911 aa36.31■■■■□ 3.4
TRAF3IP1-203ENST00000409739 DHX32Q7L7V1 743 aaKnown RBP36.31■■■■□ 3.4
TRAF3IP1-203ENST00000409739 TMTC2Q8N394 836 aa36.31■■■■□ 3.4
TRAF3IP1-203ENST00000409739 NUP133Q8WUM0 1156 aa36.31■■■■□ 3.4
TRAF3IP1-203ENST00000409739 TCEANC2Q96MN5 208 aa36.31■■■■□ 3.4
TRAF3IP1-203ENST00000409739 PFASO15067 1338 aa36.31■■■■□ 3.4
TRAF3IP1-203ENST00000409739 TRPV1Q8NER1 839 aa36.3■■■■□ 3.4
TRAF3IP1-203ENST00000409739 FGD4Q96M96 766 aa36.3■■■■□ 3.4
TRAF3IP1-203ENST00000409739 USP26Q9BXU7 913 aa36.3■■■■□ 3.4
TRAF3IP1-203ENST00000409739 CRISPLD2Q9H0B8 497 aa36.3■■■■□ 3.4
TRAF3IP1-203ENST00000409739 CCDC69A6NI79 296 aa36.29■■■■□ 3.4
TRAF3IP1-203ENST00000409739 NFIBO00712 420 aa36.29■■■■□ 3.4
TRAF3IP1-203ENST00000409739 SLC35G1Q2M3R5 365 aa36.29■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms