RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 PP2D1A8MPX8 630 aa12.82□□□□□ -0.36
SNX13-202ENST00000409604 DGKZQ13574 1117 aa12.82□□□□□ -0.36
SNX13-202ENST00000409604 PPP2R5BQ15173 497 aa12.82□□□□□ -0.36
SNX13-202ENST00000409604 RNF169Q8NCN4 708 aa12.82□□□□□ -0.36
SNX13-202ENST00000409604 SYMPKQ92797 1274 aaKnown RBP12.82□□□□□ -0.36
SNX13-202ENST00000409604 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 XRCC6P12956 609 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNX13-202ENST00000409604 SFPQP23246 707 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNX13-202ENST00000409604 HOXA10P31260 410 aaPredicted RBP12.81□□□□□ -0.36
SNX13-202ENST00000409604 CUL4AQ13619 759 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 RPAP3Q9H6T3 665 aaPredicted RBP12.81□□□□□ -0.36
SNX13-202ENST00000409604 KIAA1024Q9UPX6 916 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 ASTN2O75129 1339 aaPredicted RBP12.81□□□□□ -0.36
SNX13-202ENST00000409604 SPDYE2BA6NHP3 402 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 GRIN3BO60391 1043 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 SPDYE6P0CI01 402 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 DACT2Q5SW24 774 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 HHIPL2Q6UWX4 724 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 SLC30A10Q6XR72 485 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 GPT2Q8TD30 523 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 RBSNQ9H1K0 784 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 PRM3Q9NNZ6 103 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 PXDNLA1KZ92 1463 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 PSMA7O14818 248 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 MMP1P03956 469 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 FKBP15Q5T1M5 1219 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 FAM43AQ8N2R8 423 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 MYCT1Q8N699 235 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 CTNND2Q9UQB3 1225 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 RGPD2P0DJD1 1756 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 SFI1A8K8P3 1242 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 MIER3Q7Z3K6 550 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 CDAN1Q8IWY9 1227 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 TRPC6Q9Y210 931 aa12.81□□□□□ -0.36
SNX13-202ENST00000409604 SALL3Q9BXA9 1300 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 KIF20AO95235 890 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 ZNF157P51786 506 aaPredicted RBP12.8□□□□□ -0.36
SNX13-202ENST00000409604 LRRC41Q15345 812 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 SKIDA1Q1XH10 827 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 KANK3Q6NY19 840 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 IFNKQ9P0W0 207 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 IQCA1LA6NCM1 817 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 POTEMA6NI47 508 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 OR52Z1P0C646 297 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 EXOSC10Q01780 885 aaKnown RBP12.8□□□□□ -0.36
SNX13-202ENST00000409604 FAM151AQ8WW52 585 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 AZI2Q9H6S1 392 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 PCDHA4Q9UN74 947 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 PHACTR2O75167 634 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 PCP11498 1178 aaKnown RBP12.8□□□□□ -0.36
SNX13-202ENST00000409604 TRIM21P19474 475 aaKnown RBP12.8□□□□□ -0.36
SNX13-202ENST00000409604 EPHX2P34913 555 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 SLC39A2Q9NP94 309 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 SERPINA10Q9UK55 444 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 DNM3Q9UQ16 869 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 ELP1O95163 1332 aa12.8□□□□□ -0.36
SNX13-202ENST00000409604 KIF28PB7ZC32 967 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 ONECUT3O60422 494 aaPredicted RBP12.79□□□□□ -0.36
SNX13-202ENST00000409604 CCDC173Q0VFZ6 552 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 ALX1Q15699 326 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 APOBEC3HQ6NTF7 200 aaKnown RBP12.79□□□□□ -0.36
SNX13-202ENST00000409604 RGPD5Q99666 1765 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 B4DLN1 442 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 CUTAO60888 179 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 XKR9Q5GH70 373 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 LRCH2Q5VUJ6 765 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 CCDC186Q7Z3E2 898 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 APOBEC3FQ8IUX4 373 aaKnown RBP12.79□□□□□ -0.36
SNX13-202ENST00000409604 RMDN3Q96TC7 470 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 RNF146Q9NTX7 359 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 AKAP12Q02952 1782 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 EPB41L2O43491 1005 aaKnown RBP12.79□□□□□ -0.36
SNX13-202ENST00000409604 NBPF11Q86T75 865 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 CAGE1Q8TC20 777 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 FAM200AQ8TCP9 573 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 PIGOQ8TEQ8 1089 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 ZNF577Q9BSK1 485 aa12.79□□□□□ -0.36
SNX13-202ENST00000409604 TDP2O95551 362 aa12.78□□□□□ -0.36
SNX13-202ENST00000409604 PAF1Q8N7H5 531 aa12.78□□□□□ -0.36
SNX13-202ENST00000409604 AGBL1Q96MI9 1066 aa12.78□□□□□ -0.36
SNX13-202ENST00000409604 PNMA6FA0A0J9YX94 578 aa12.78□□□□□ -0.36
SNX13-202ENST00000409604 PRPF3O43395 683 aaKnown RBP12.78□□□□□ -0.36
SNX13-202ENST00000409604 USO1O60763 962 aaKnown RBP12.78□□□□□ -0.36
SNX13-202ENST00000409604 GCNT3O95395 438 aa12.78□□□□□ -0.36
SNX13-202ENST00000409604 USP14P54578 494 aa12.78□□□□□ -0.36
SNX13-202ENST00000409604 FAM102BQ5T8I3 360 aa12.78□□□□□ -0.36
SNX13-202ENST00000409604 RNF207Q6ZRF8 634 aa12.78□□□□□ -0.36
SNX13-202ENST00000409604 ZBTB5O15062 677 aa12.78□□□□□ -0.36
SNX13-202ENST00000409604 CBFA2T2O43439 604 aa12.78□□□□□ -0.36
SNX13-202ENST00000409604 CTTNQ14247 550 aaKnown RBP12.78□□□□□ -0.36
SNX13-202ENST00000409604 GPBP1Q86WP2 473 aa12.78□□□□□ -0.36
SNX13-202ENST00000409604 TCRBV5S4A2TA0A5A2 114 aa12.77□□□□□ -0.36
SNX13-202ENST00000409604 IL1R1P14778 569 aa12.77□□□□□ -0.36
SNX13-202ENST00000409604 STAT3P40763 770 aa12.77□□□□□ -0.36
SNX13-202ENST00000409604 RCSD1Q6JBY9 416 aa12.77□□□□□ -0.36
SNX13-202ENST00000409604 KIAA1328Q86T90 577 aa12.77□□□□□ -0.36
SNX13-202ENST00000409604 TRPM4Q8TD43 1214 aa12.77□□□□□ -0.36
SNX13-202ENST00000409604 ZNF512BQ96KM6 892 aaPredicted RBP12.77□□□□□ -0.36
SNX13-202ENST00000409604 SLF1Q9BQI6 1058 aa12.77□□□□□ -0.36
SNX13-202ENST00000409604 ZDHHC9Q9Y397 364 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms