RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 SNAP25P60880 206 aa18.29■□□□□ 0.52
PTPRN2-205ENST00000409483 SFMBT2Q5VUG0 894 aa18.29■□□□□ 0.52
PTPRN2-205ENST00000409483 STAG1Q8WVM7 1258 aa18.29■□□□□ 0.52
PTPRN2-205ENST00000409483 GJA10Q969M2 543 aa18.29■□□□□ 0.52
PTPRN2-205ENST00000409483 ATP6V0A2Q9Y487 856 aa18.29■□□□□ 0.52
PTPRN2-205ENST00000409483 COL3A1P02461 1466 aaPredicted RBP18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 FAM205CA6NFA0 338 aa18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 FAM196BA6NMK8 535 aa18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 PRR29P0C7W0 189 aa18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 ABCB4P21439 1286 aa18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 TNNC1P63316 161 aa18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 PABPC4Q13310 644 aaKnown RBP eCLIP18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 USP37Q86T82 979 aa18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 NAP1L4Q99733 375 aaKnown RBP18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.28■□□□□ 0.523e-7■■■■■ 33.4
PTPRN2-205ENST00000409483 CPDO75976 1380 aa18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 PSDA5PKW4 1024 aaPredicted RBP18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 ZMYND10O75800 440 aa18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 CDC25BP30305 580 aa18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 POLR2FP61218 127 aaKnown RBP18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 ERCC5P28715 1186 aaPredicted RBP18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 TSGA10IPQ3SY00 556 aa18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 GRIPAP1Q4V328 841 aa18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 FAM26FQ5R3K3 315 aa18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 PANK4Q9NVE7 773 aa18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 SEMA3EO15041 775 aa18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 GAS7O60861 476 aa18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 SELENOSQ9BQE4 189 aa18.28■□□□□ 0.52
PTPRN2-205ENST00000409483 PTPREP23469 700 aa18.27■□□□□ 0.52
PTPRN2-205ENST00000409483 SERPINB13Q9UIV8 391 aa18.27■□□□□ 0.52
PTPRN2-205ENST00000409483 MEIS1O00470 390 aa18.27■□□□□ 0.52
PTPRN2-205ENST00000409483 SPOPO43791 374 aa18.27■□□□□ 0.52
PTPRN2-205ENST00000409483 SHC4Q6S5L8 630 aa18.27■□□□□ 0.52
PTPRN2-205ENST00000409483 GSTA5Q7RTV2 222 aa18.27■□□□□ 0.52
PTPRN2-205ENST00000409483 VSTM4Q8IW00 320 aa18.27■□□□□ 0.52
PTPRN2-205ENST00000409483 C10orf67Q8IYJ2 551 aa18.27■□□□□ 0.52
PTPRN2-205ENST00000409483 IMPG2Q9BZV3 1241 aa18.27■□□□□ 0.52
PTPRN2-205ENST00000409483 RESP18Q5W5W9 173 aa18.27■□□□□ 0.52
PTPRN2-205ENST00000409483 QTRT2Q9H974 415 aaKnown RBP18.27■□□□□ 0.52
PTPRN2-205ENST00000409483 POLD4Q9HCU8 107 aa18.27■□□□□ 0.52
PTPRN2-205ENST00000409483 DCP1AQ9NPI6 582 aaPredicted RBP18.27■□□□□ 0.52
PTPRN2-205ENST00000409483 STK32BQ9NY57 414 aa18.27■□□□□ 0.52
PTPRN2-205ENST00000409483 PCP11498 1178 aaKnown RBP18.27■□□□□ 0.51
PTPRN2-205ENST00000409483 KIAA1210Q9ULL0 1709 aa18.27■□□□□ 0.51
PTPRN2-205ENST00000409483 CYP27A1Q02318 531 aa18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 CUL4BQ13620 913 aa18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 SMC1AQ14683 1233 aaKnown RBP18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 TMTC3Q6ZXV5 915 aa18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 NBPF11Q86T75 865 aa18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 SMAP1Q8IYB5 467 aaPredicted RBP18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 ENOX1Q8TC92 643 aaKnown RBP18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 PLVAPQ9BX97 442 aa18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 UBE2Q2LH0YL09 131 aa18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 CALUO43852 315 aaPredicted RBP18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 PLCG1P19174 1290 aa18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 CDK8P49336 464 aa18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 TRIM28Q13263 835 aaKnown RBP18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 FAM76AQ8TAV0 307 aa18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 NT5C3AQ9H0P0 336 aa18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 PP2D1A8MPX8 630 aa18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 PPEF1O14829 653 aaPredicted RBP18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 FBXO11Q86XK2 927 aa18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 SMCR8Q8TEV9 937 aaPredicted RBP18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 SH2D4AQ9H788 454 aa18.26■□□□□ 0.51
PTPRN2-205ENST00000409483 NEBLO76041 1014 aa18.25■□□□□ 0.51
PTPRN2-205ENST00000409483 ALAS1P13196 640 aa18.25■□□□□ 0.51
PTPRN2-205ENST00000409483 LARP4BQ92615 738 aaKnown RBP18.25■□□□□ 0.51
PTPRN2-205ENST00000409483 ADAT2Q7Z6V5 191 aaKnown RBP18.25■□□□□ 0.51
PTPRN2-205ENST00000409483 CCDC51Q96ER9 411 aa18.25■□□□□ 0.51
PTPRN2-205ENST00000409483 GLT8D2Q9H1C3 349 aa18.25■□□□□ 0.51
PTPRN2-205ENST00000409483 CDHR2Q9BYE9 1310 aa18.25■□□□□ 0.51
PTPRN2-205ENST00000409483 MAP2P11137 1827 aaKnown RBP18.25■□□□□ 0.51
PTPRN2-205ENST00000409483 TRIM49BA6NDI0 452 aa18.25■□□□□ 0.51
PTPRN2-205ENST00000409483 ANTXR2P58335 489 aa18.25■□□□□ 0.51
PTPRN2-205ENST00000409483 ADAM9Q13443 819 aa18.25■□□□□ 0.51
PTPRN2-205ENST00000409483 CCDC155Q8N6L0 562 aa18.25■□□□□ 0.51
PTPRN2-205ENST00000409483 FAM84BQ96KN1 310 aaPredicted RBP18.25■□□□□ 0.51
PTPRN2-205ENST00000409483 CTTNBP2NLQ9P2B4 639 aa18.25■□□□□ 0.51
PTPRN2-205ENST00000409483 GINS2Q9Y248 185 aa18.25■□□□□ 0.51
PTPRN2-205ENST00000409483 CTDNEP1O95476 244 aa18.25■□□□□ 0.51
PTPRN2-205ENST00000409483 TRAPPC10P48553 1259 aa18.24■□□□□ 0.51
PTPRN2-205ENST00000409483 GPR161Q8N6U8 529 aaKnown RBP18.24■□□□□ 0.51
PTPRN2-205ENST00000409483 FNBP1Q96RU3 617 aa18.24■□□□□ 0.51
PTPRN2-205ENST00000409483 ARMCX3Q9UH62 379 aaPredicted RBP18.24■□□□□ 0.51
PTPRN2-205ENST00000409483 XRCC5P13010 732 aaKnown RBP18.24■□□□□ 0.51
PTPRN2-205ENST00000409483 COL15A1P39059 1388 aa18.24■□□□□ 0.51
PTPRN2-205ENST00000409483 GUCY2FP51841 1108 aa18.24■□□□□ 0.51
PTPRN2-205ENST00000409483 PPP1R7Q15435 360 aa18.24■□□□□ 0.51
PTPRN2-205ENST00000409483 U2AF1L4Q8WU68 220 aaKnown RBP18.24■□□□□ 0.51
PTPRN2-205ENST00000409483 MYO1AQ9UBC5 1043 aa18.24■□□□□ 0.51
PTPRN2-205ENST00000409483 DIP2AQ14689 1571 aa18.24■□□□□ 0.51
PTPRN2-205ENST00000409483 FDPSP14324 419 aaKnown RBP18.24■□□□□ 0.51
PTPRN2-205ENST00000409483 GRAPQ13588 217 aa18.24■□□□□ 0.51
PTPRN2-205ENST00000409483 GRAPLQ8TC17 118 aaPredicted RBP18.24■□□□□ 0.51
PTPRN2-205ENST00000409483 CCDC114Q96M63 670 aa18.24■□□□□ 0.51
PTPRN2-205ENST00000409483 TESPA1A2RU30 521 aaPredicted RBP18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 PDE6BP35913 854 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 ABCB5Q2M3G0 1257 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 CLEC4GQ6UXB4 293 aa18.23■□□□□ 0.51
PTPRN2-205ENST00000409483 MICALCLQ6ZW33 695 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms