RNA–Protein interactions for RNA: ENST00000409476.5

MDH1-202, Transcript of malate dehydrogenase 1, humanhuman

TSL 5 BASIC

Gene MDH1, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-202ENST00000409476 PTCH2Q9Y6C5 1203 aa12.64□□□□□ -0.39
MDH1-202ENST00000409476 COL11A1P12107 1806 aaPredicted RBP12.64□□□□□ -0.39
MDH1-202ENST00000409476 RLFQ13129 1914 aa12.64□□□□□ -0.39
MDH1-202ENST00000409476 BAZ2BQ9UIF8 2168 aaKnown RBP12.63□□□□□ -0.39
MDH1-202ENST00000409476 CCDC69A6NI79 296 aa12.63□□□□□ -0.39
MDH1-202ENST00000409476 SH2B2O14492 632 aaPredicted RBP12.63□□□□□ -0.39
MDH1-202ENST00000409476 PARP1P09874 1014 aaKnown RBP12.63□□□□□ -0.39
MDH1-202ENST00000409476 FLT3LGP49771 235 aa12.63□□□□□ -0.39
MDH1-202ENST00000409476 STAT2P52630 851 aa12.63□□□□□ -0.39
MDH1-202ENST00000409476 ZNF543Q08ER8 600 aa12.63□□□□□ -0.39
MDH1-202ENST00000409476 APOBRQ0VD83 1088 aa12.63□□□□□ -0.39
MDH1-202ENST00000409476 SART3Q15020 963 aaKnown RBP12.63□□□□□ -0.39
MDH1-202ENST00000409476 FAM110CQ1W6H9 321 aa12.63□□□□□ -0.39
MDH1-202ENST00000409476 TSGA10IPQ3SY00 556 aa12.63□□□□□ -0.39
MDH1-202ENST00000409476 SYDE2Q5VT97 1194 aa12.63□□□□□ -0.39
MDH1-202ENST00000409476 BLOC1S2Q6QNY1 142 aa12.63□□□□□ -0.39
MDH1-202ENST00000409476 KCNB2Q92953 911 aa12.63□□□□□ -0.39
MDH1-202ENST00000409476 GMCL1Q96IK5 515 aa12.63□□□□□ -0.39
MDH1-202ENST00000409476 UPF3BQ9BZI7 483 aaKnown RBP12.63□□□□□ -0.39
MDH1-202ENST00000409476 SPATC1LQ9H0A9 340 aa12.63□□□□□ -0.39
MDH1-202ENST00000409476 HOMER2Q9NSB8 354 aa12.63□□□□□ -0.39
MDH1-202ENST00000409476 BRPF3Q9ULD4 1205 aa12.63□□□□□ -0.39
MDH1-202ENST00000409476 PTPN22Q9Y2R2 807 aa12.63□□□□□ -0.39
MDH1-202ENST00000409476 MGAMO43451 1857 aa12.63□□□□□ -0.39
MDH1-202ENST00000409476 PPFIA3O75145 1194 aa12.62□□□□□ -0.39
MDH1-202ENST00000409476 ALAS1P13196 640 aa12.62□□□□□ -0.39
MDH1-202ENST00000409476 HOXD10P28358 340 aa12.62□□□□□ -0.39
MDH1-202ENST00000409476 KRT32Q14532 448 aa12.62□□□□□ -0.39
MDH1-202ENST00000409476 SNRNP48Q6IEG0 339 aaKnown RBP12.62□□□□□ -0.39
MDH1-202ENST00000409476 NOL8Q76FK4 1167 aaKnown RBP12.62□□□□□ -0.39
MDH1-202ENST00000409476 GPR142Q7Z601 462 aa12.62□□□□□ -0.39
MDH1-202ENST00000409476 PLEKHH3Q7Z736 793 aa12.62□□□□□ -0.39
MDH1-202ENST00000409476 CATIPQ7Z7H3 387 aa12.62□□□□□ -0.39
MDH1-202ENST00000409476 NBPF11Q86T75 865 aa12.62□□□□□ -0.39
MDH1-202ENST00000409476 FAM160B2Q86V87 743 aa12.62□□□□□ -0.39
MDH1-202ENST00000409476 RAET1EQ8TD07 263 aa12.62□□□□□ -0.39
MDH1-202ENST00000409476 SH3TC2Q8TF17 1288 aa12.62□□□□□ -0.39
MDH1-202ENST00000409476 COA7Q96BR5 231 aa12.62□□□□□ -0.39
MDH1-202ENST00000409476 HS3ST6Q96QI5 342 aa12.62□□□□□ -0.39
MDH1-202ENST00000409476 BIN2Q9UBW5 565 aaPredicted RBP12.62□□□□□ -0.39
MDH1-202ENST00000409476 ADAMTS5Q9UNA0 930 aa12.62□□□□□ -0.39
MDH1-202ENST00000409476 ZNFX1Q9P2E3 1918 aaKnown RBP12.62□□□□□ -0.39
MDH1-202ENST00000409476 MYPNQ86TC9 1320 aa12.62□□□□□ -0.39
MDH1-202ENST00000409476 hCG_1642624A0A1W2PR95 340 aa12.61□□□□□ -0.39
MDH1-202ENST00000409476 CCDC85CA6NKD9 419 aa12.61□□□□□ -0.39
MDH1-202ENST00000409476 KLRF2D3W0D1 207 aa12.61□□□□□ -0.39
MDH1-202ENST00000409476 ELNP15502 786 aa12.61□□□□□ -0.39
MDH1-202ENST00000409476 RPS6KB1P23443 525 aa12.61□□□□□ -0.39
MDH1-202ENST00000409476 ARHGEF6Q15052 776 aa12.61□□□□□ -0.39
MDH1-202ENST00000409476 NOM1Q5C9Z4 860 aaKnown RBP12.61□□□□□ -0.39
MDH1-202ENST00000409476 ADGRF4Q8IZF3 695 aa12.61□□□□□ -0.39
MDH1-202ENST00000409476 ZNF654Q8IZM8 581 aa12.61□□□□□ -0.39
MDH1-202ENST00000409476 REPS2Q8NFH8 660 aa12.61□□□□□ -0.39
MDH1-202ENST00000409476 TMEM87BQ96K49 555 aa12.61□□□□□ -0.39
MDH1-202ENST00000409476 KRTAP3-3Q9BYR6 98 aa12.61□□□□□ -0.39
MDH1-202ENST00000409476 KRTAP3-2Q9BYR7 98 aa12.61□□□□□ -0.39
MDH1-202ENST00000409476 SRRDQ9UH36 339 aa12.61□□□□□ -0.39
MDH1-202ENST00000409476 MAD2L2Q9UI95 211 aa12.61□□□□□ -0.39
MDH1-202ENST00000409476 GJD2Q9UKL4 321 aa12.61□□□□□ -0.39
MDH1-202ENST00000409476 KLF18A0A0U1RQI7 1052 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 FAM205CA6NFA0 338 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 PGK2P07205 417 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 SNHG28P0DPA3 235 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 PTPREP23469 700 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 PSMA5P28066 241 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 CCT2P78371 535 aaKnown RBP12.6□□□□□ -0.39
MDH1-202ENST00000409476 CCNA1P78396 465 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 TRIM32Q13049 653 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 CCL14Q16627 93 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 SLC35G1Q2M3R5 365 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 USH1GQ495M9 461 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 SYNE3Q6ZMZ3 975 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 HOMER1Q86YM7 354 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 NPLOC4Q8TAT6 608 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 TBC1D5Q92609 795 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 BRF1Q92994 677 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 SLC38A10Q9HBR0 1119 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 PDRG1Q9NUG6 133 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 ZNF214Q9UL59 606 aaPredicted RBP12.6□□□□□ -0.39
MDH1-202ENST00000409476 HPS5Q9UPZ3 1129 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 SLC12A7Q9Y666 1083 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 ZNF536O15090 1300 aa12.6□□□□□ -0.39
MDH1-202ENST00000409476 PALM3A6NDB9 673 aaPredicted RBP12.59□□□□□ -0.39
MDH1-202ENST00000409476 COBLO75128 1261 aa12.59□□□□□ -0.39
MDH1-202ENST00000409476 MAPK4P31152 587 aa12.59□□□□□ -0.39
MDH1-202ENST00000409476 TROAPQ12815 778 aa12.59□□□□□ -0.39
MDH1-202ENST00000409476 STK3Q13188 491 aa12.59□□□□□ -0.39
MDH1-202ENST00000409476 GRM4Q14833 912 aa12.59□□□□□ -0.39
MDH1-202ENST00000409476 MUM1L1Q5H9M0 696 aa12.59□□□□□ -0.39
MDH1-202ENST00000409476 FBXO46Q6PJ61 603 aaPredicted RBP12.59□□□□□ -0.39
MDH1-202ENST00000409476 BTNL9Q6UXG8 535 aa12.59□□□□□ -0.39
MDH1-202ENST00000409476 RUFY3Q7L099 469 aa12.59□□□□□ -0.39
MDH1-202ENST00000409476 DPP9Q86TI2 863 aa12.59□□□□□ -0.39
MDH1-202ENST00000409476 MICU3Q86XE3 530 aa12.59□□□□□ -0.39
MDH1-202ENST00000409476 RIOX2Q8IUF8 465 aa12.59□□□□□ -0.39
MDH1-202ENST00000409476 TMTC2Q8N394 836 aa12.59□□□□□ -0.39
MDH1-202ENST00000409476 GTF3C2Q8WUA4 911 aaPredicted RBP12.59□□□□□ -0.39
MDH1-202ENST00000409476 TRERF1Q96PN7 1200 aa12.59□□□□□ -0.39
MDH1-202ENST00000409476 PURBQ96QR8 312 aaKnown RBP12.59□□□□□ -0.39
MDH1-202ENST00000409476 PIGSQ96S52 555 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms