RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 ZSCAN16Q9H4T2 348 aaPredicted RBP19.37■□□□□ 0.69
SSB-202ENST00000409333 PPP1R9AQ9ULJ8 1098 aa19.37■□□□□ 0.69
SSB-202ENST00000409333 TOMM70O94826 608 aa19.37■□□□□ 0.69
SSB-202ENST00000409333 KRT2P35908 639 aa19.37■□□□□ 0.69
SSB-202ENST00000409333 MKRN3Q13064 507 aaKnown RBP19.37■□□□□ 0.69
SSB-202ENST00000409333 NR5A1Q13285 461 aa19.37■□□□□ 0.69
SSB-202ENST00000409333 MOGSQ13724 837 aa19.37■□□□□ 0.69
SSB-202ENST00000409333 SAFBQ15424 915 aaKnown RBP eCLIP19.37■□□□□ 0.69
SSB-202ENST00000409333 CCDC174Q6PII3 467 aa19.37■□□□□ 0.69
SSB-202ENST00000409333 CATSPERGQ6ZRH7 1159 aa19.37■□□□□ 0.69
SSB-202ENST00000409333 MYH7BA7E2Y1 1941 aa19.36■□□□□ 0.69
SSB-202ENST00000409333 USP17L15C9J2P7 530 aa19.36■□□□□ 0.69
SSB-202ENST00000409333 USP17L13C9JLJ4 530 aa19.36■□□□□ 0.69
SSB-202ENST00000409333 USP17L11C9JVI0 530 aa19.36■□□□□ 0.69
SSB-202ENST00000409333 USP17L18D6R9N7 530 aa19.36■□□□□ 0.69
SSB-202ENST00000409333 USP17L22D6RA61 530 aa19.36■□□□□ 0.69
SSB-202ENST00000409333 USP17L17D6RBQ6 530 aa19.36■□□□□ 0.69
SSB-202ENST00000409333 USP17L19D6RCP7 530 aa19.36■□□□□ 0.69
SSB-202ENST00000409333 USP17L20D6RJB6 530 aa19.36■□□□□ 0.69
SSB-202ENST00000409333 BAG4O95429 457 aaKnown RBP19.36■□□□□ 0.69
SSB-202ENST00000409333 U2AF2P26368 475 aaKnown RBP eCLIP19.36■□□□□ 0.692e-8■■□□□ 11.9
SSB-202ENST00000409333 USP17L24Q0WX57 530 aa19.36■□□□□ 0.69
SSB-202ENST00000409333 GNL2Q13823 731 aaKnown RBP19.36■□□□□ 0.69
SSB-202ENST00000409333 USH1GQ495M9 461 aa19.36■□□□□ 0.69
SSB-202ENST00000409333 FBXO11Q86XK2 927 aa19.36■□□□□ 0.69
SSB-202ENST00000409333 ZNF784Q8NCA9 323 aaPredicted RBP19.36■□□□□ 0.69
SSB-202ENST00000409333 CCDC12Q8WUD4 166 aaPredicted RBP19.36■□□□□ 0.69
SSB-202ENST00000409333 AMNQ9BXJ7 453 aa19.36■□□□□ 0.69
SSB-202ENST00000409333 SNAPC2Q13487 334 aa19.35■□□□□ 0.69
SSB-202ENST00000409333 SAPCD2Q86UD0 394 aa19.35■□□□□ 0.69
SSB-202ENST00000409333 ATG4CQ96DT6 458 aa19.35■□□□□ 0.69
SSB-202ENST00000409333 ZMYND12Q9H0C1 365 aa19.35■□□□□ 0.69
SSB-202ENST00000409333 PCDHA4Q9UN74 947 aa19.35■□□□□ 0.69
SSB-202ENST00000409333 PCDHA1Q9Y5I3 950 aa19.35■□□□□ 0.69
SSB-202ENST00000409333 ATP6V1DQ9Y5K8 247 aa19.35■□□□□ 0.69
SSB-202ENST00000409333 SMCO2A6NFE2 343 aa19.34■□□□□ 0.69
SSB-202ENST00000409333 DNM1Q05193 864 aaKnown RBP19.34■□□□□ 0.69
SSB-202ENST00000409333 PPP1R18Q6NYC8 613 aa19.34■□□□□ 0.69
SSB-202ENST00000409333 CLEC17AQ6ZS10 378 aa19.34■□□□□ 0.69
SSB-202ENST00000409333 FOXP1Q9H334 677 aaPredicted RBP19.34■□□□□ 0.69
SSB-202ENST00000409333 ZNF536O15090 1300 aa19.34■□□□□ 0.69
SSB-202ENST00000409333 ESYT2A0FGR8 921 aa19.34■□□□□ 0.69
SSB-202ENST00000409333 CALML3P27482 149 aa19.34■□□□□ 0.69
SSB-202ENST00000409333 COG2Q14746 738 aa19.34■□□□□ 0.69
SSB-202ENST00000409333 BRAPQ7Z569 592 aa19.34■□□□□ 0.69
SSB-202ENST00000409333 NOSTRINQ8IVI9 506 aa19.34■□□□□ 0.69
SSB-202ENST00000409333 BLIDQ8IZY5 108 aa19.34■□□□□ 0.69
SSB-202ENST00000409333 FAM177A1Q8N128 213 aaPredicted RBP19.34■□□□□ 0.69
SSB-202ENST00000409333 DAGLBQ8NCG7 672 aa19.34■□□□□ 0.69
SSB-202ENST00000409333 RASGRP4Q8TDF6 673 aa19.34■□□□□ 0.69
SSB-202ENST00000409333 TNFRSF25Q93038 417 aa19.34■□□□□ 0.69
SSB-202ENST00000409333 SLC38A10Q9HBR0 1119 aa19.34■□□□□ 0.69
SSB-202ENST00000409333 BRMS1Q9HCU9 246 aa19.34■□□□□ 0.69
SSB-202ENST00000409333 AGTPBP1Q9UPW5 1226 aa19.34■□□□□ 0.69
SSB-202ENST00000409333 DSG3P32926 999 aa19.33■□□□□ 0.68
SSB-202ENST00000409333 NOM1Q5C9Z4 860 aaKnown RBP19.33■□□□□ 0.68
SSB-202ENST00000409333 EARS2Q5JPH6 523 aaKnown RBP19.33■□□□□ 0.68
SSB-202ENST00000409333 SPRYD7Q5W111 196 aa19.33■□□□□ 0.68
SSB-202ENST00000409333 MS4A4AQ96JQ5 239 aa19.33■□□□□ 0.68
SSB-202ENST00000409333 GBP4Q96PP9 640 aa19.33■□□□□ 0.68
SSB-202ENST00000409333 C6orf50Q9HD87 102 aa19.33■□□□□ 0.68
SSB-202ENST00000409333 FAM205CA6NFA0 338 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 SPDYE16A6NNV3 312 aaPredicted RBP19.32■□□□□ 0.68
SSB-202ENST00000409333 M0R2N6 131 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 VWA5AO00534 786 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 ZBTB48P10074 688 aaPredicted RBP19.32■□□□□ 0.68
SSB-202ENST00000409333 HOXA7P31268 230 aaPredicted RBP19.32■□□□□ 0.68
SSB-202ENST00000409333 GALNT17Q6IS24 598 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 FASTKD5Q7L8L6 764 aaKnown RBP19.32■□□□□ 0.68
SSB-202ENST00000409333 CNPY2Q9Y2B0 182 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 ICAM1P05362 532 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 GNA11P29992 359 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 ZNF157P51786 506 aaPredicted RBP19.32■□□□□ 0.68
SSB-202ENST00000409333 ADCY7P51828 1080 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 GTF2A2P52657 109 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 MYSM1Q5VVJ2 828 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 GPAT2Q6NUI2 795 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 RASAL3Q86YV0 1011 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 CPXCR1Q8N123 301 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 AGBL1Q96MI9 1066 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 RAVER2Q9HCJ3 691 aaKnown RBP19.32■□□□□ 0.68
SSB-202ENST00000409333 PCDHA6Q9UN73 950 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 ADAMTS5Q9UNA0 930 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 PCDHA8Q9Y5H6 950 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 TLL2Q9Y6L7 1015 aa19.32■□□□□ 0.68
SSB-202ENST00000409333 MYPNQ86TC9 1320 aa19.31■□□□□ 0.68
SSB-202ENST00000409333 ZBED4O75132 1171 aa19.31■□□□□ 0.68
SSB-202ENST00000409333 REPS2Q8NFH8 660 aa19.31■□□□□ 0.68
SSB-202ENST00000409333 FTOQ9C0B1 505 aaKnown RBP eCLIP19.31■□□□□ 0.68
SSB-202ENST00000409333 RIC8AQ9NPQ8 531 aa19.31■□□□□ 0.68
SSB-202ENST00000409333 CCPG1Q9ULG6 757 aa19.31■□□□□ 0.68
SSB-202ENST00000409333 CCL15-CCL14A0A0B4J2E2 113 aa19.3■□□□□ 0.68
SSB-202ENST00000409333 OPLAHO14841 1288 aa19.3■□□□□ 0.68
SSB-202ENST00000409333 NCLP19338 710 aaKnown RBP19.3■□□□□ 0.68
SSB-202ENST00000409333 CCL15Q16663 113 aa19.3■□□□□ 0.68
SSB-202ENST00000409333 RGMBQ6NW40 437 aa19.3■□□□□ 0.68
SSB-202ENST00000409333 CUL5Q93034 780 aa19.3■□□□□ 0.68
SSB-202ENST00000409333 ASCC2Q9H1I8 757 aaPredicted RBP19.3■□□□□ 0.68
SSB-202ENST00000409333 GDPD2Q9HCC8 539 aa19.3■□□□□ 0.68
SSB-202ENST00000409333 HOXC10Q9NYD6 342 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms