RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 CCL5P13501 91 aa24.25■■□□□ 1.47
C4orf48-201ENST00000409248 TMEM67Q5HYA8 995 aa24.25■■□□□ 1.47
C4orf48-201ENST00000409248 TTBK2Q6IQ55 1244 aa24.25■■□□□ 1.47
C4orf48-201ENST00000409248 TMEM87BQ96K49 555 aa24.25■■□□□ 1.47
C4orf48-201ENST00000409248 TBC1D32Q96NH3 1257 aa24.25■■□□□ 1.47
C4orf48-201ENST00000409248 CYP46A1Q9Y6A2 500 aa24.25■■□□□ 1.47
C4orf48-201ENST00000409248 PARP1P09874 1014 aaKnown RBP24.24■■□□□ 1.47
C4orf48-201ENST00000409248 SLC16A2P36021 539 aa24.24■■□□□ 1.47
C4orf48-201ENST00000409248 SLC4A3P48751 1232 aa24.24■■□□□ 1.47
C4orf48-201ENST00000409248 MTFR1Q15390 333 aa24.24■■□□□ 1.47
C4orf48-201ENST00000409248 TKFCQ3LXA3 575 aa24.24■■□□□ 1.47
C4orf48-201ENST00000409248 CHST13Q8NET6 341 aa24.24■■□□□ 1.47
C4orf48-201ENST00000409248 RANBP17Q9H2T7 1088 aaKnown RBP24.24■■□□□ 1.47
C4orf48-201ENST00000409248 ZSWIM6Q9HCJ5 1215 aa24.24■■□□□ 1.47
C4orf48-201ENST00000409248 PNMA2Q9UL42 364 aa24.24■■□□□ 1.47
C4orf48-201ENST00000409248 ZNFX1Q9P2E3 1918 aaKnown RBP24.23■■□□□ 1.47
C4orf48-201ENST00000409248 RPS6KB1P23443 525 aa24.23■■□□□ 1.47
C4orf48-201ENST00000409248 EXOSC10Q01780 885 aaKnown RBP24.23■■□□□ 1.47
C4orf48-201ENST00000409248 CCDC174Q6PII3 467 aa24.23■■□□□ 1.47
C4orf48-201ENST00000409248 RUFY3Q7L099 469 aa24.23■■□□□ 1.47
C4orf48-201ENST00000409248 RNF208Q9H0X6 261 aa24.23■■□□□ 1.47
C4orf48-201ENST00000409248 PLXNA1Q9UIW2 1896 aa24.23■■□□□ 1.47
C4orf48-201ENST00000409248 KIAA0100Q14667 2235 aaKnown RBP24.23■■□□□ 1.47
C4orf48-201ENST00000409248 ZNF536O15090 1300 aa24.22■■□□□ 1.47
C4orf48-201ENST00000409248 CPA1P15085 419 aa24.22■■□□□ 1.47
C4orf48-201ENST00000409248 FGD1P98174 961 aa24.22■■□□□ 1.47
C4orf48-201ENST00000409248 COL9A3Q14050 684 aaPredicted RBP24.22■■□□□ 1.47
C4orf48-201ENST00000409248 MFSD14CQ5VZR4 134 aa24.22■■□□□ 1.47
C4orf48-201ENST00000409248 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.22■■□□□ 1.47
C4orf48-201ENST00000409248 UNC93B1Q9H1C4 597 aa24.22■■□□□ 1.47
C4orf48-201ENST00000409248 ACAD9Q9H845 621 aa24.22■■□□□ 1.47
C4orf48-201ENST00000409248 CCPG1Q9ULG6 757 aa24.22■■□□□ 1.47
C4orf48-201ENST00000409248 RIPK3Q9Y572 518 aa24.22■■□□□ 1.47
C4orf48-201ENST00000409248 CENPFP49454 3210 aa24.21■■□□□ 1.47
C4orf48-201ENST00000409248 POTEFA5A3E0 1075 aa24.21■■□□□ 1.47
C4orf48-201ENST00000409248 SH2B2O14492 632 aaPredicted RBP24.21■■□□□ 1.47
C4orf48-201ENST00000409248 ICAM1P05362 532 aa24.21■■□□□ 1.47
C4orf48-201ENST00000409248 GOLGA8HP0CJ92 632 aa24.21■■□□□ 1.47
C4orf48-201ENST00000409248 PRKAR2AP13861 404 aaKnown RBP24.21■■□□□ 1.47
C4orf48-201ENST00000409248 CCL14Q16627 93 aa24.21■■□□□ 1.47
C4orf48-201ENST00000409248 OLFML2BQ68BL8 750 aa24.21■■□□□ 1.47
C4orf48-201ENST00000409248 NPLOC4Q8TAT6 608 aa24.21■■□□□ 1.47
C4orf48-201ENST00000409248 TCEANC2Q96MN5 208 aa24.21■■□□□ 1.47
C4orf48-201ENST00000409248 LRRC2Q9BYS8 371 aa24.21■■□□□ 1.47
C4orf48-201ENST00000409248 UPF3BQ9BZI7 483 aaKnown RBP24.21■■□□□ 1.47
C4orf48-201ENST00000409248 HOMER2Q9NSB8 354 aa24.21■■□□□ 1.47
C4orf48-201ENST00000409248 RNF146Q9NTX7 359 aa24.21■■□□□ 1.47
C4orf48-201ENST00000409248 RPTORQ8N122 1335 aa24.2■■□□□ 1.46
C4orf48-201ENST00000409248 GJB1P08034 283 aa24.2■■□□□ 1.46
C4orf48-201ENST00000409248 RGS19P49795 217 aa24.2■■□□□ 1.46
C4orf48-201ENST00000409248 SNAP25P60880 206 aa24.2■■□□□ 1.46
C4orf48-201ENST00000409248 MAP3K21Q5TCX8 1036 aa24.2■■□□□ 1.46
C4orf48-201ENST00000409248 CATIPQ7Z7H3 387 aa24.2■■□□□ 1.46
C4orf48-201ENST00000409248 IGDCC4Q8TDY8 1250 aa24.2■■□□□ 1.46
C4orf48-201ENST00000409248 AGBL1Q96MI9 1066 aa24.2■■□□□ 1.46
C4orf48-201ENST00000409248 HMX1Q9NP08 348 aaPredicted RBP24.2■■□□□ 1.46
C4orf48-201ENST00000409248 COBLO75128 1261 aa24.19■■□□□ 1.46
C4orf48-201ENST00000409248 ALAS1P13196 640 aa24.19■■□□□ 1.46
C4orf48-201ENST00000409248 ANKRD35Q8N283 1001 aa24.19■■□□□ 1.46
C4orf48-201ENST00000409248 TMTC2Q8N394 836 aa24.19■■□□□ 1.46
C4orf48-201ENST00000409248 DDX11Q96FC9 970 aa24.19■■□□□ 1.46
C4orf48-201ENST00000409248 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.19■■□□□ 1.46
C4orf48-201ENST00000409248 LY9Q9HBG7 655 aa24.19■■□□□ 1.46
C4orf48-201ENST00000409248 DIS3Q9Y2L1 958 aaKnown RBP24.19■■□□□ 1.46
C4orf48-201ENST00000409248 DHX16O60231 1041 aaKnown RBP24.18■■□□□ 1.46
C4orf48-201ENST00000409248 LIFRP42702 1097 aa24.18■■□□□ 1.46
C4orf48-201ENST00000409248 TRIM32Q13049 653 aa24.18■■□□□ 1.46
C4orf48-201ENST00000409248 GRM4Q14833 912 aa24.18■■□□□ 1.46
C4orf48-201ENST00000409248 NFXL1Q6ZNB6 911 aa24.18■■□□□ 1.46
C4orf48-201ENST00000409248 TRERF1Q96PN7 1200 aa24.18■■□□□ 1.46
C4orf48-201ENST00000409248 PAK6Q9NQU5 681 aaPredicted RBP24.18■■□□□ 1.46
C4orf48-201ENST00000409248 PDRG1Q9NUG6 133 aa24.18■■□□□ 1.46
C4orf48-201ENST00000409248 FLRT1Q9NZU1 646 aa24.18■■□□□ 1.46
C4orf48-201ENST00000409248 PFASO15067 1338 aa24.17■■□□□ 1.46
C4orf48-201ENST00000409248 DDAH1O94760 285 aa24.17■■□□□ 1.46
C4orf48-201ENST00000409248 PGK2P07205 417 aa24.17■■□□□ 1.46
C4orf48-201ENST00000409248 CAPN2P17655 700 aa24.17■■□□□ 1.46
C4orf48-201ENST00000409248 RABEP1Q15276 862 aa24.17■■□□□ 1.46
C4orf48-201ENST00000409248 Q6ZUG5 572 aa24.17■■□□□ 1.46
C4orf48-201ENST00000409248 MAML3Q96JK9 1138 aa24.17■■□□□ 1.46
C4orf48-201ENST00000409248 KIF2CQ99661 725 aa24.17■■□□□ 1.46
C4orf48-201ENST00000409248 UBA5Q9GZZ9 404 aa24.17■■□□□ 1.46
C4orf48-201ENST00000409248 SENP2Q9HC62 589 aa24.17■■□□□ 1.46
C4orf48-201ENST00000409248 GPHNQ9NQX3 736 aaPredicted RBP24.17■■□□□ 1.46
C4orf48-201ENST00000409248 MYH6P13533 1939 aa24.17■■□□□ 1.46
C4orf48-201ENST00000409248 CCDC69A6NI79 296 aa24.16■■□□□ 1.46
C4orf48-201ENST00000409248 GJA8P48165 433 aa24.16■■□□□ 1.46
C4orf48-201ENST00000409248 CACNB2Q08289 660 aaPredicted RBP24.16■■□□□ 1.46
C4orf48-201ENST00000409248 ZNF654Q8IZM8 581 aa24.16■■□□□ 1.46
C4orf48-201ENST00000409248 DNAJC25-GNG10A0A024R161 153 aa24.15■■□□□ 1.46
C4orf48-201ENST00000409248 KLRF2D3W0D1 207 aa24.15■■□□□ 1.46
C4orf48-201ENST00000409248 EN2P19622 333 aaPredicted RBP24.15■■□□□ 1.46
C4orf48-201ENST00000409248 NEK4P51957 841 aa24.15■■□□□ 1.46
C4orf48-201ENST00000409248 TROAPQ12815 778 aa24.15■■□□□ 1.46
C4orf48-201ENST00000409248 CDC37Q16543 378 aaPredicted RBP24.15■■□□□ 1.46
C4orf48-201ENST00000409248 ZNF792Q3KQV3 632 aa24.15■■□□□ 1.46
C4orf48-201ENST00000409248 ADGRF4Q8IZF3 695 aa24.15■■□□□ 1.46
C4orf48-201ENST00000409248 FBXL16Q8N461 479 aa24.15■■□□□ 1.46
C4orf48-201ENST00000409248 U2AF1L4Q8WU68 220 aaKnown RBP24.15■■□□□ 1.46
C4orf48-201ENST00000409248 DEFB118Q96PH6 123 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms