RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.56□□□□□ -1.52
SCN3A-203ENST00000409101 H7C1W4 665 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 SH3BP5O60239 455 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 OR52Z1P0C646 297 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 CYP2J2P51589 502 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 TNNC1P63316 161 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 STXBP2Q15833 593 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 SNRNP48Q6IEG0 339 aaKnown RBP5.56□□□□□ -1.52
SCN3A-203ENST00000409101 DCUN1D2Q6PH85 259 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 KIF18AQ8NI77 898 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 URGCPQ8TCY9 931 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 ANKRD36BP1Q96IX9 119 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 TSGA10Q9BZW7 698 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 KIF9Q9HAQ2 790 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 SPHKAPQ2M3C7 1700 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 DENND3A2RUS2 1198 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 TBC1D8BQ0IIM8 1120 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 UVSSAQ2YD98 709 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 SPECC1Q5M775 1068 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 RAB3IL1Q8TBN0 382 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 GTF3C2Q8WUA4 911 aaPredicted RBP5.56□□□□□ -1.52
SCN3A-203ENST00000409101 TRERF1Q96PN7 1200 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 SNX25Q9H3E2 840 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 KDM4FA0A1W2PPD8 638 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 A0A1W2PRG0 241 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 USP17L15C9J2P7 530 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 USP17L13C9JLJ4 530 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 USP17L11C9JVI0 530 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 USP17L18D6R9N7 530 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 USP17L22D6RA61 530 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 USP17L17D6RBQ6 530 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 USP17L19D6RCP7 530 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 USP17L20D6RJB6 530 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 INO80B-WBP1J3KQ70 363 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 GNA14O95837 355 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 ABCD1P33897 745 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 TGFB2P61812 414 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 USP17L24Q0WX57 530 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 CSGALNACT2Q8N6G5 542 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 CELF1Q92879 486 aaKnown RBP5.56□□□□□ -1.52
SCN3A-203ENST00000409101 INTS4Q96HW7 963 aaKnown RBP5.56□□□□□ -1.52
SCN3A-203ENST00000409101 PIGSQ96S52 555 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 PPP1R16BQ96T49 567 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 CCDC77Q9BR77 488 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 INO80BQ9C086 356 aaPredicted RBP5.56□□□□□ -1.52
SCN3A-203ENST00000409101 TRMT1Q9NXH9 659 aaKnown RBP5.56□□□□□ -1.52
SCN3A-203ENST00000409101 HESX1Q9UBX0 185 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 NCOA3Q9Y6Q9 1424 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 MED14O60244 1454 aa5.56□□□□□ -1.52
SCN3A-203ENST00000409101 A0A0D9SFI3 127 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 FGAP02671 866 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 CETPP11597 493 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 RPS12P25398 132 aaKnown RBP5.55□□□□□ -1.52
SCN3A-203ENST00000409101 PAK1Q13153 545 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 TTLL4Q14679 1199 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 CCDC63Q8NA47 563 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 LEO1Q8WVC0 666 aaPredicted RBP5.55□□□□□ -1.52
SCN3A-203ENST00000409101 SNX21Q969T3 373 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 SEC62Q99442 399 aaKnown RBP5.55□□□□□ -1.52
SCN3A-203ENST00000409101 WDR11Q9BZH6 1224 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 CSRNP2Q9H175 543 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 RAVER2Q9HCJ3 691 aaKnown RBP5.55□□□□□ -1.52
SCN3A-203ENST00000409101 PANK4Q9NVE7 773 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 MTUS1Q9ULD2 1270 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 SPOPO43791 374 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 N4BP1O75113 896 aaKnown RBP5.55□□□□□ -1.52
SCN3A-203ENST00000409101 TFRCP02786 760 aaKnown RBP5.55□□□□□ -1.52
SCN3A-203ENST00000409101 KCNJ6P48051 423 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 GMPSP49915 693 aaPredicted RBP5.55□□□□□ -1.52
SCN3A-203ENST00000409101 PPP1R7Q15435 360 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 MAATS1Q7Z4T9 603 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 CACTINQ8WUQ7 758 aaKnown RBP5.55□□□□□ -1.52
SCN3A-203ENST00000409101 JAKMIP2Q96AA8 810 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 PCDHA4Q9UN74 947 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 DIP2BQ9P265 1576 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 A0A1B0GVL5 298 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 ASB14A6NK59 587 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 POLR2DO15514 142 aaKnown RBP5.55□□□□□ -1.52
SCN3A-203ENST00000409101 PIK3CAP42336 1068 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 SNAP25P60880 206 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 KIF5AQ12840 1032 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 RASGRF1Q13972 1273 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 ZMYM1Q5SVZ6 1142 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 PRR5LQ6MZQ0 368 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 MROH7-TTC4A0A0A0MT08 1334 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 TECPR2O15040 1411 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 CPS1P31327 1500 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 MARK3P27448 753 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 FCGRTP55899 365 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 RSBN1LQ6PCB5 846 aaPredicted RBP5.55□□□□□ -1.52
SCN3A-203ENST00000409101 RDH13Q8NBN7 331 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 ZNF274Q96GC6 653 aaPredicted RBP5.55□□□□□ -1.52
SCN3A-203ENST00000409101 DNAJC25Q9H1X3 360 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 UNC13BO14795 1591 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 PRKAB2O43741 272 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 STAM2O75886 525 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 ADCY5O95622 1261 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 ANGEL2Q5VTE6 544 aaKnown RBP5.55□□□□□ -1.52
SCN3A-203ENST00000409101 ARMCX5Q6P1M9 558 aa5.55□□□□□ -1.52
SCN3A-203ENST00000409101 PPP2R3CQ969Q6 453 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms