RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 RAVER2Q9HCJ3 691 aaKnown RBP15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 RNF146Q9NTX7 359 aa15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 ZHX1Q9UKY1 873 aaPredicted RBP15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 PHF24Q9UPV7 400 aa15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 ATP11BQ9Y2G3 1177 aa15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 RAD50Q92878 1312 aa15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 DNAJC25-GNG10A0A024R161 153 aa15.11■□□□□ 0.01
SNORD88B-201ENST00000408454 TLR3O15455 904 aaKnown RBP15.11■□□□□ 0.01
SNORD88B-201ENST00000408454 PGK2P07205 417 aa15.11■□□□□ 0.01
SNORD88B-201ENST00000408454 SDSP20132 328 aa15.11■□□□□ 0.01
SNORD88B-201ENST00000408454 MCCP23508 829 aa15.11■□□□□ 0.01
SNORD88B-201ENST00000408454 MAGEA10P43363 369 aaPredicted RBP15.11■□□□□ 0.01
SNORD88B-201ENST00000408454 MNX1P50219 401 aaPredicted RBP15.11■□□□□ 0.01
SNORD88B-201ENST00000408454 LRRC26Q2I0M4 334 aa15.11■□□□□ 0.01
SNORD88B-201ENST00000408454 GJC2Q5T442 439 aaPredicted RBP15.11■□□□□ 0.01
SNORD88B-201ENST00000408454 B4GALNT3Q6L9W6 998 aa15.11■□□□□ 0.01
SNORD88B-201ENST00000408454 SLC39A5Q6ZMH5 540 aa15.11■□□□□ 0.01
SNORD88B-201ENST00000408454 DGKHQ86XP1 1220 aa15.11■□□□□ 0.01
SNORD88B-201ENST00000408454 CCPG1Q9ULG6 757 aa15.11■□□□□ 0.01
SNORD88B-201ENST00000408454 RLFQ13129 1914 aa15.1■□□□□ 0.01
SNORD88B-201ENST00000408454 MYH4Q9Y623 1939 aa15.1■□□□□ 0.01
SNORD88B-201ENST00000408454 ICAM1P05362 532 aa15.1■□□□□ 0.01
SNORD88B-201ENST00000408454 CST5P28325 142 aaPredicted RBP15.1■□□□□ 0.01
SNORD88B-201ENST00000408454 NMIQ13287 307 aaPredicted RBP15.1■□□□□ 0.01
SNORD88B-201ENST00000408454 ACVR2BQ13705 512 aa15.1■□□□□ 0.01
SNORD88B-201ENST00000408454 SNX17Q15036 470 aa15.1■□□□□ 0.01
SNORD88B-201ENST00000408454 TOX2Q96NM4 488 aa15.1■□□□□ 0.01
SNORD88B-201ENST00000408454 TRERF1Q96PN7 1200 aa15.1■□□□□ 0.01
SNORD88B-201ENST00000408454 DSCC1Q9BVC3 393 aa15.1■□□□□ 0.01
SNORD88B-201ENST00000408454 AP5M1Q9H0R1 490 aa15.1■□□□□ 0.01
SNORD88B-201ENST00000408454 STARD7Q9NQZ5 370 aa15.1■□□□□ 0.01
SNORD88B-201ENST00000408454 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.1■□□□□ 0.01
SNORD88B-201ENST00000408454 ELP1O95163 1332 aa15.1■□□□□ 0.01
SNORD88B-201ENST00000408454 PARP14Q460N5 1801 aa15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 ALAS1P13196 640 aa15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 SYN1P17600 705 aa15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 ADCYAP1R1P41586 468 aa15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 NOVP48745 357 aa15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 ATN1P54259 1190 aaPredicted RBP15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 CTDSPL2Q05D32 466 aa15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 SART3Q15020 963 aaKnown RBP15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 BTNL9Q6UXG8 535 aa15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 NOL8Q76FK4 1167 aaKnown RBP15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 TRPV1Q8NER1 839 aa15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 UBAC1Q9BSL1 405 aa15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 MTIF3Q9H2K0 278 aaKnown RBP15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 KAT14Q9H8E8 782 aa15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 PRDM5Q9NQX1 630 aaPredicted RBP15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 HOMER2Q9NSB8 354 aa15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 PRR12Q9ULL5 1215 aa15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 Q9Y3F1 56 aa15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 WDR19Q8NEZ3 1342 aa15.09■□□□□ 0.01
SNORD88B-201ENST00000408454 CENPFP49454 3210 aa15.08■□□□□ 0.01
SNORD88B-201ENST00000408454 A0A0D9SFI3 127 aa15.08■□□□□ 0
SNORD88B-201ENST00000408454 ERICH2A1L162 156 aa15.08■□□□□ 0
SNORD88B-201ENST00000408454 C6orf222P0C671 652 aaPredicted RBP15.08■□□□□ 0
SNORD88B-201ENST00000408454 SYDE2Q5VT97 1194 aa15.08■□□□□ 0
SNORD88B-201ENST00000408454 ARMCX2Q7L311 632 aa15.08■□□□□ 0
SNORD88B-201ENST00000408454 VTI1AQ96AJ9 217 aa15.08■□□□□ 0
SNORD88B-201ENST00000408454 FAM227BQ96M60 508 aa15.08■□□□□ 0
SNORD88B-201ENST00000408454 VTA1Q9NP79 307 aa15.08■□□□□ 0
SNORD88B-201ENST00000408454 FRMPD3Q5JV73 1810 aa15.08■□□□□ 0
SNORD88B-201ENST00000408454 SMIM22K7EJ46 135 aa15.07■□□□□ 0
SNORD88B-201ENST00000408454 CLTBP09497 229 aa15.07■□□□□ 0
SNORD88B-201ENST00000408454 ZNF865P0CJ78 1059 aaPredicted RBP15.07■□□□□ 0
SNORD88B-201ENST00000408454 RAG1P15918 1043 aa15.07■□□□□ 0
SNORD88B-201ENST00000408454 ACLYP53396 1101 aa15.07■□□□□ 0
SNORD88B-201ENST00000408454 ASPRV1Q53RT3 343 aa15.07■□□□□ 0
SNORD88B-201ENST00000408454 IQSEC1Q6DN90 963 aa15.07■□□□□ 0
SNORD88B-201ENST00000408454 CWC27Q6UX04 472 aaKnown RBP15.07■□□□□ 0
SNORD88B-201ENST00000408454 KCTD1Q719H9 257 aa15.07■□□□□ 0
SNORD88B-201ENST00000408454 MCF2L2Q86YR7 1114 aa15.07■□□□□ 0
SNORD88B-201ENST00000408454 PLEKHM2Q8IWE5 1019 aa15.07■□□□□ 0
SNORD88B-201ENST00000408454 RANBP17Q9H2T7 1088 aaKnown RBP15.07■□□□□ 0
SNORD88B-201ENST00000408454 A0A0U1RQG5 324 aaPredicted RBP15.06■□□□□ 0
SNORD88B-201ENST00000408454 A0A1W2PQ45 241 aaPredicted RBP15.06■□□□□ 0
SNORD88B-201ENST00000408454 A0A1W2PQY0 241 aa15.06■□□□□ 0
SNORD88B-201ENST00000408454 NKRFO15226 690 aaKnown RBP eCLIP15.06■□□□□ 0
SNORD88B-201ENST00000408454 TNFAIP2Q03169 654 aa15.06■□□□□ 0
SNORD88B-201ENST00000408454 CCDC144BQ3MJ40 725 aa15.06■□□□□ 0
SNORD88B-201ENST00000408454 GNASQ5JWF2 1037 aa15.06■□□□□ 0
SNORD88B-201ENST00000408454 PRAMEF19Q5SWL8 479 aa15.06■□□□□ 0
SNORD88B-201ENST00000408454 VPS53Q5VIR6 699 aa15.06■□□□□ 0
SNORD88B-201ENST00000408454 FAM133AQ8N9E0 248 aa15.06■□□□□ 0
SNORD88B-201ENST00000408454 DNERQ8NFT8 737 aa15.06■□□□□ 0
SNORD88B-201ENST00000408454 TMEM47Q9BQJ4 181 aa15.06■□□□□ 0
SNORD88B-201ENST00000408454 A1CFQ9NQ94 594 aaKnown RBP15.06■□□□□ 0
SNORD88B-201ENST00000408454 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
SNORD88B-201ENST00000408454 SYNRGQ9UMZ2 1314 aa15.06■□□□□ 0
SNORD88B-201ENST00000408454 COL11A1P12107 1806 aaPredicted RBP15.06■□□□□ 0
SNORD88B-201ENST00000408454 KPNA6O60684 536 aa15.05■□□□□ -0
SNORD88B-201ENST00000408454 PGK1P00558 417 aa15.05■□□□□ -0
SNORD88B-201ENST00000408454 GJA9P57773 515 aa15.05■□□□□ -0
SNORD88B-201ENST00000408454 MDM2Q00987 491 aaPredicted RBP15.05■□□□□ -0
SNORD88B-201ENST00000408454 TRIM60Q495X7 471 aa15.05■□□□□ -0
SNORD88B-201ENST00000408454 ANO1Q5XXA6 986 aa15.05■□□□□ -0
SNORD88B-201ENST00000408454 FAM109BQ6ICB4 259 aaPredicted RBP15.05■□□□□ -0
SNORD88B-201ENST00000408454 NSMFQ6X4W1 530 aa15.05■□□□□ -0
SNORD88B-201ENST00000408454 ANKRD33Q7Z3H0 272 aa15.05■□□□□ -0
SNORD88B-201ENST00000408454 RALYLQ86SE5 291 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms