RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 FBXO40Q9UH90 709 aa22.76■■□□□ 1.23
SMARCB1-204ENST00000407422 NEDD4P46934 1319 aa22.76■■□□□ 1.23
SMARCB1-204ENST00000407422 SNAI1O95863 264 aaPredicted RBP22.75■■□□□ 1.23
SMARCB1-204ENST00000407422 TOP1P11387 765 aaKnown RBP22.75■■□□□ 1.23
SMARCB1-204ENST00000407422 LRRC41Q15345 812 aa22.75■■□□□ 1.23
SMARCB1-204ENST00000407422 CCDC96Q2M329 555 aa22.75■■□□□ 1.23
SMARCB1-204ENST00000407422 TTBK2Q6IQ55 1244 aa22.75■■□□□ 1.23
SMARCB1-204ENST00000407422 CCDC174Q6PII3 467 aa22.75■■□□□ 1.23
SMARCB1-204ENST00000407422 LENG1Q96BZ8 264 aaPredicted RBP22.75■■□□□ 1.23
SMARCB1-204ENST00000407422 CNPY2Q9Y2B0 182 aa22.75■■□□□ 1.23
SMARCB1-204ENST00000407422 KBTBD13C9JR72 458 aa22.75■■□□□ 1.23
SMARCB1-204ENST00000407422 HIP1O00291 1037 aa22.75■■□□□ 1.23
SMARCB1-204ENST00000407422 GSPT1P15170 499 aaKnown RBP22.75■■□□□ 1.23
SMARCB1-204ENST00000407422 MAMDC4Q6UXC1 1216 aa22.75■■□□□ 1.23
SMARCB1-204ENST00000407422 DCAF4Q8WV16 495 aa22.75■■□□□ 1.23
SMARCB1-204ENST00000407422 IL25Q9H293 177 aa22.75■■□□□ 1.23
SMARCB1-204ENST00000407422 SYNGAP1Q96PV0 1343 aa22.74■■□□□ 1.23
SMARCB1-204ENST00000407422 ZNF213O14771 459 aa22.74■■□□□ 1.23
SMARCB1-204ENST00000407422 RARBP10826 455 aa22.74■■□□□ 1.23
SMARCB1-204ENST00000407422 SLC16A2P36021 539 aa22.74■■□□□ 1.23
SMARCB1-204ENST00000407422 MAGEA10P43363 369 aaPredicted RBP22.74■■□□□ 1.23
SMARCB1-204ENST00000407422 MSL3Q8N5Y2 521 aaKnown RBP22.74■■□□□ 1.23
SMARCB1-204ENST00000407422 ACAD9Q9H845 621 aa22.74■■□□□ 1.23
SMARCB1-204ENST00000407422 XPNPEP3Q9NQH7 507 aa22.74■■□□□ 1.23
SMARCB1-204ENST00000407422 RNF146Q9NTX7 359 aa22.74■■□□□ 1.23
SMARCB1-204ENST00000407422 FRMPD2Q68DX3 1309 aaPredicted RBP22.73■■□□□ 1.23
SMARCB1-204ENST00000407422 PGK1P00558 417 aa22.73■■□□□ 1.23
SMARCB1-204ENST00000407422 PCP11498 1178 aaKnown RBP22.73■■□□□ 1.23
SMARCB1-204ENST00000407422 CNTN2Q02246 1040 aa22.73■■□□□ 1.23
SMARCB1-204ENST00000407422 TTC22Q5TAA0 569 aa22.73■■□□□ 1.23
SMARCB1-204ENST00000407422 ZNF467Q7Z7K2 595 aaPredicted RBP22.73■■□□□ 1.23
SMARCB1-204ENST00000407422 RNF41Q9H4P4 317 aaPredicted RBP22.73■■□□□ 1.23
SMARCB1-204ENST00000407422 ALAS1P13196 640 aa22.72■■□□□ 1.23
SMARCB1-204ENST00000407422 AKR1A1P14550 325 aa22.72■■□□□ 1.23
SMARCB1-204ENST00000407422 ADCYAP1R1P41586 468 aa22.72■■□□□ 1.23
SMARCB1-204ENST00000407422 FERMT2Q96AC1 680 aa22.72■■□□□ 1.23
SMARCB1-204ENST00000407422 TRERF1Q96PN7 1200 aa22.72■■□□□ 1.23
SMARCB1-204ENST00000407422 ZKSCAN3Q9BRR0 538 aa22.72■■□□□ 1.23
SMARCB1-204ENST00000407422 GPCPD1Q9NPB8 672 aa22.72■■□□□ 1.23
SMARCB1-204ENST00000407422 A1CFQ9NQ94 594 aaKnown RBP22.72■■□□□ 1.23
SMARCB1-204ENST00000407422 ESR2Q92731 530 aa22.71■■□□□ 1.23
SMARCB1-204ENST00000407422 DSCC1Q9BVC3 393 aa22.71■■□□□ 1.23
SMARCB1-204ENST00000407422 ZHX1Q9UKY1 873 aaPredicted RBP22.71■■□□□ 1.23
SMARCB1-204ENST00000407422 PDHBP11177 359 aa22.71■■□□□ 1.23
SMARCB1-204ENST00000407422 BMP8BP34820 402 aa22.71■■□□□ 1.23
SMARCB1-204ENST00000407422 RTP1P59025 263 aa22.71■■□□□ 1.23
SMARCB1-204ENST00000407422 MUM1L1Q5H9M0 696 aa22.71■■□□□ 1.23
SMARCB1-204ENST00000407422 BTNL9Q6UXG8 535 aa22.71■■□□□ 1.23
SMARCB1-204ENST00000407422 SLC39A5Q6ZMH5 540 aa22.71■■□□□ 1.23
SMARCB1-204ENST00000407422 FAM133AQ8N9E0 248 aa22.71■■□□□ 1.23
SMARCB1-204ENST00000407422 TTC14Q96N46 770 aa22.71■■□□□ 1.23
SMARCB1-204ENST00000407422 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.71■■□□□ 1.23
SMARCB1-204ENST00000407422 A0A1W2PPC1 479 aa22.7■■□□□ 1.22
SMARCB1-204ENST00000407422 POTEB2H3BUK9 544 aa22.7■■□□□ 1.22
SMARCB1-204ENST00000407422 TKFCQ3LXA3 575 aa22.7■■□□□ 1.22
SMARCB1-204ENST00000407422 RANBP17Q9H2T7 1088 aaKnown RBP22.7■■□□□ 1.22
SMARCB1-204ENST00000407422 ATP11BQ9Y2G3 1177 aa22.7■■□□□ 1.22
SMARCB1-204ENST00000407422 LCTP09848 1927 aa22.69■■□□□ 1.22
SMARCB1-204ENST00000407422 KDM4AO75164 1064 aa22.69■■□□□ 1.22
SMARCB1-204ENST00000407422 ACVR2BQ13705 512 aa22.69■■□□□ 1.22
SMARCB1-204ENST00000407422 SYDE2Q5VT97 1194 aa22.69■■□□□ 1.22
SMARCB1-204ENST00000407422 ARMCX2Q7L311 632 aa22.69■■□□□ 1.22
SMARCB1-204ENST00000407422 CCDC144CPQ8IYA2 1237 aa22.69■■□□□ 1.22
SMARCB1-204ENST00000407422 FAM184BQ9ULE4 1060 aa22.69■■□□□ 1.22
SMARCB1-204ENST00000407422 CCPG1Q9ULG6 757 aa22.69■■□□□ 1.22
SMARCB1-204ENST00000407422 SOWAHBA6NEL2 793 aa22.68■■□□□ 1.22
SMARCB1-204ENST00000407422 ADAMTS4O75173 837 aa22.68■■□□□ 1.22
SMARCB1-204ENST00000407422 ICAM1P05362 532 aa22.68■■□□□ 1.22
SMARCB1-204ENST00000407422 MDM2Q00987 491 aaPredicted RBP22.68■■□□□ 1.22
SMARCB1-204ENST00000407422 RNF180Q86T96 592 aa22.68■■□□□ 1.22
SMARCB1-204ENST00000407422 PHF24Q9UPV7 400 aa22.68■■□□□ 1.22
SMARCB1-204ENST00000407422 DDX49Q9Y6V7 483 aaKnown RBP22.68■■□□□ 1.22
SMARCB1-204ENST00000407422 B4E1Z4 1266 aa22.68■■□□□ 1.22
SMARCB1-204ENST00000407422 SOX1O00570 391 aaPredicted RBP22.68■■□□□ 1.22
SMARCB1-204ENST00000407422 ADCY6O43306 1168 aa22.68■■□□□ 1.22
SMARCB1-204ENST00000407422 ZNF543Q08ER8 600 aa22.68■■□□□ 1.22
SMARCB1-204ENST00000407422 SNX17Q15036 470 aa22.68■■□□□ 1.22
SMARCB1-204ENST00000407422 ABHD16BQ9H3Z7 469 aa22.68■■□□□ 1.22
SMARCB1-204ENST00000407422 ASTN1O14525 1302 aa22.67■■□□□ 1.22
SMARCB1-204ENST00000407422 SYNRGQ9UMZ2 1314 aa22.67■■□□□ 1.22
SMARCB1-204ENST00000407422 SNHG28P0DPA3 235 aa22.67■■□□□ 1.22
SMARCB1-204ENST00000407422 IRX5P78411 483 aaPredicted RBP22.67■■□□□ 1.22
SMARCB1-204ENST00000407422 IMMTQ16891 758 aaKnown RBP22.67■■□□□ 1.22
SMARCB1-204ENST00000407422 CCDC144BQ3MJ40 725 aa22.67■■□□□ 1.22
SMARCB1-204ENST00000407422 TRIM60Q495X7 471 aa22.67■■□□□ 1.22
SMARCB1-204ENST00000407422 KATNBL1Q9H079 304 aa22.67■■□□□ 1.22
SMARCB1-204ENST00000407422 CYP39A1Q9NYL5 469 aa22.67■■□□□ 1.22
SMARCB1-204ENST00000407422 DGKHQ86XP1 1220 aa22.66■■□□□ 1.22
SMARCB1-204ENST00000407422 PURBQ96QR8 312 aaKnown RBP22.66■■□□□ 1.22
SMARCB1-204ENST00000407422 UBE2OQ9C0C9 1292 aaKnown RBP22.66■■□□□ 1.22
SMARCB1-204ENST00000407422 ZSWIM5Q9P217 1185 aa22.66■■□□□ 1.22
SMARCB1-204ENST00000407422 CTNNA3Q9UI47 895 aa22.66■■□□□ 1.22
SMARCB1-204ENST00000407422 MYADML2A6NDP7 307 aa22.65■■□□□ 1.22
SMARCB1-204ENST00000407422 GOLGA8HP0CJ92 632 aa22.65■■□□□ 1.22
SMARCB1-204ENST00000407422 NSMFQ6X4W1 530 aa22.65■■□□□ 1.22
SMARCB1-204ENST00000407422 IQCA1Q86XH1 822 aa22.65■■□□□ 1.22
SMARCB1-204ENST00000407422 LTBP2Q14767 1821 aa22.65■■□□□ 1.22
SMARCB1-204ENST00000407422 DUSP11O75319 330 aaKnown RBP22.64■■□□□ 1.22
SMARCB1-204ENST00000407422 KLHDC9Q8NEP7 349 aa22.64■■□□□ 1.22
SMARCB1-204ENST00000407422 LRCH3Q96II8 777 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms