RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 MCM2P49736 904 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 METAP2P50579 478 aaKnown RBP eCLIP9.73□□□□□ -0.85
GPC3-203ENST00000406757 FCGRTP55899 365 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 EVCP57679 992 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 KLRC3Q07444 240 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 TROAPQ12815 778 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 MTMR2Q13614 643 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 BECN1Q14457 450 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 SLFN13Q68D06 897 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 TTBK2Q6IQ55 1244 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 GADL1Q6ZQY3 521 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 FANCBQ8NB91 859 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 PIBF1Q8WXW3 757 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 MKL1Q969V6 931 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 ZNF274Q96GC6 653 aaPredicted RBP9.73□□□□□ -0.85
GPC3-203ENST00000406757 FEZ1Q99689 392 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 MTA3Q9BTC8 594 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 UBA5Q9GZZ9 404 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 RNF208Q9H0X6 261 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 ARHGEF10LQ9HCE6 1279 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 FAM217BQ9NTX9 383 aaPredicted RBP9.73□□□□□ -0.85
GPC3-203ENST00000406757 GABRQQ9UN88 632 aa9.73□□□□□ -0.85
GPC3-203ENST00000406757 RANBP2P49792 3224 aaKnown RBP9.73□□□□□ -0.85
GPC3-203ENST00000406757 DOCK1Q14185 1865 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 MYH4Q9Y623 1939 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 A0A0G2JLL6 359 aaPredicted RBP9.72□□□□□ -0.85
GPC3-203ENST00000406757 hCG_1642624A0A1W2PR95 340 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 JAK2O60674 1132 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 CTDNEP1O95476 244 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 NDUFB10O96000 172 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 GJB1P08034 283 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 SLC16A2P36021 539 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 GJA8P48165 433 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 FOSBP53539 338 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 SNAP25P60880 206 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 GRM4Q14833 912 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 RTN1Q16799 776 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 CCDC96Q2M329 555 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 KCTD1Q719H9 257 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 PRRT2Q7Z6L0 340 aaPredicted RBP9.72□□□□□ -0.85
GPC3-203ENST00000406757 ZNF280CQ8ND82 737 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 GTF3C6Q969F1 213 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 DDX11Q96FC9 970 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 VAT1LQ9HCJ6 419 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 EMILIN3Q9NT22 766 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 TMX2Q9Y320 296 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 AFG3L2Q9Y4W6 797 aa9.72□□□□□ -0.85
GPC3-203ENST00000406757 USP17L10C9JJH3 530 aa9.71□□□□□ -0.86
GPC3-203ENST00000406757 DDAH1O94760 285 aa9.71□□□□□ -0.86
GPC3-203ENST00000406757 PARP1P09874 1014 aaKnown RBP9.71□□□□□ -0.86
GPC3-203ENST00000406757 PDHBP11177 359 aa9.71□□□□□ -0.86
GPC3-203ENST00000406757 NT5C2P49902 561 aa9.71□□□□□ -0.86
GPC3-203ENST00000406757 HMGCS2P54868 508 aa9.71□□□□□ -0.86
GPC3-203ENST00000406757 UBXN2AP68543 259 aa9.71□□□□□ -0.86
GPC3-203ENST00000406757 SLC35G1Q2M3R5 365 aa9.71□□□□□ -0.86
GPC3-203ENST00000406757 FAM83BQ5T0W9 1011 aa9.71□□□□□ -0.86
GPC3-203ENST00000406757 FASTKD5Q7L8L6 764 aaKnown RBP9.71□□□□□ -0.86
GPC3-203ENST00000406757 UBE2Q1Q7Z7E8 422 aa9.71□□□□□ -0.86
GPC3-203ENST00000406757 SRBD1Q8N5C6 995 aaKnown RBP9.71□□□□□ -0.86
GPC3-203ENST00000406757 CTCFLQ8NI51 663 aaPredicted RBP9.71□□□□□ -0.86
GPC3-203ENST00000406757 PHKBQ93100 1093 aa9.71□□□□□ -0.86
GPC3-203ENST00000406757 IPO9Q96P70 1041 aaKnown RBP9.71□□□□□ -0.86
GPC3-203ENST00000406757 WDR18Q9BV38 432 aa9.71□□□□□ -0.86
GPC3-203ENST00000406757 UNC93B1Q9H1C4 597 aa9.71□□□□□ -0.86
GPC3-203ENST00000406757 VCPKMTQ9H867 229 aa9.71□□□□□ -0.86
GPC3-203ENST00000406757 AS3MTQ9HBK9 375 aa9.71□□□□□ -0.86
GPC3-203ENST00000406757 SH2B1Q9NRF2 756 aaPredicted RBP9.71□□□□□ -0.86
GPC3-203ENST00000406757 GINM1Q9NU53 330 aa9.71□□□□□ -0.86
GPC3-203ENST00000406757 RBM27Q9P2N5 1060 aaKnown RBP9.71□□□□□ -0.86
GPC3-203ENST00000406757 MAD2L2Q9UI95 211 aa9.71□□□□□ -0.86
GPC3-203ENST00000406757 PALM3A6NDB9 673 aaPredicted RBP9.7□□□□□ -0.86
GPC3-203ENST00000406757 ADCY3O60266 1144 aa9.7□□□□□ -0.86
GPC3-203ENST00000406757 HSP90AA1P07900 732 aaKnown RBP9.7□□□□□ -0.86
GPC3-203ENST00000406757 CALM1P0DP23 149 aa9.7□□□□□ -0.86
GPC3-203ENST00000406757 CALM2P0DP24 149 aa9.7□□□□□ -0.86
GPC3-203ENST00000406757 CALM3P0DP25 149 aa9.7□□□□□ -0.86
GPC3-203ENST00000406757 ELNP15502 786 aa9.7□□□□□ -0.86
GPC3-203ENST00000406757 SLC1A4P43007 532 aa9.7□□□□□ -0.86
GPC3-203ENST00000406757 FLT3LGP49771 235 aa9.7□□□□□ -0.86
GPC3-203ENST00000406757 EMP3P54852 163 aa9.7□□□□□ -0.86
GPC3-203ENST00000406757 BACE1P56817 501 aa9.7□□□□□ -0.86
GPC3-203ENST00000406757 CUL4AQ13619 759 aa9.7□□□□□ -0.86
GPC3-203ENST00000406757 SMCR8Q8TEV9 937 aaPredicted RBP9.7□□□□□ -0.86
GPC3-203ENST00000406757 U2AF1L4Q8WU68 220 aaKnown RBP9.7□□□□□ -0.86
GPC3-203ENST00000406757 HTATIP2Q9BUP3 242 aa9.7□□□□□ -0.86
GPC3-203ENST00000406757 SLC26A6Q9BXS9 759 aa9.7□□□□□ -0.86
GPC3-203ENST00000406757 GOPCQ9HD26 462 aa9.7□□□□□ -0.86
GPC3-203ENST00000406757 DAXXQ9UER7 740 aaPredicted RBP9.7□□□□□ -0.86
GPC3-203ENST00000406757 PHIPQ8WWQ0 1821 aa9.7□□□□□ -0.86
GPC3-203ENST00000406757 PTPDC1A2A3K4 754 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 TMEM232C9JQI7 657 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 KLRF2D3W0D1 207 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 TNPO2O14787 897 aaKnown RBP9.69□□□□□ -0.86
GPC3-203ENST00000406757 CPLX1O14810 134 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 FARP2O94887 1054 aaPredicted RBP9.69□□□□□ -0.86
GPC3-203ENST00000406757 INHAP05111 366 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 BMP3P12645 472 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 ZNF543Q08ER8 600 aa9.69□□□□□ -0.86
GPC3-203ENST00000406757 IKQ13123 557 aaPredicted RBP9.69□□□□□ -0.86
GPC3-203ENST00000406757 NTRK3Q16288 839 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms