RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 SPC25Q9HBM1 224 aa5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 ATG3Q9NT62 314 aa5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 TMEFF2Q9UIK5 374 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 SF3B6Q9Y3B4 125 aaKnown RBP5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 COL4A3BPQ9Y5P4 624 aa5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 ASXL2Q76L83 1435 aa5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 ARNTLO00327 626 aa5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 IGLV1-40P01703 118 aa5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 THBDP07204 575 aa5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 SYPP08247 313 aa5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 SRFP11831 508 aa5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 MYCLP1P12525 358 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 TPP2P29144 1249 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 GRB10Q13322 594 aa5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 CWF19L1Q69YN2 538 aaKnown RBP5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 CNNM4Q6P4Q7 775 aa5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 KCNT2Q6UVM3 1135 aa5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 C22orf34Q6ZV56 151 aa5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 FGD2Q7Z6J4 655 aa5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 CRACR2BQ8N4Y2 399 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 NINJ1Q92982 152 aa5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 UBE2FQ969M7 185 aa5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 C1orf159Q96HA4 380 aa5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 FCRL3Q96P31 734 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 GPR62Q9BZJ7 368 aa5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 FOXP3Q9BZS1 431 aa5.56□□□□□ -1.52
HMGB1P17-201ENST00000403495 hCG_2014768A0A024R1R8 64 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 PLD2O14939 933 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 RASGRP1O95267 797 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 CEACAM5P06731 702 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 GSTM1P09488 218 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 HOXA10P31260 410 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 CD96P40200 585 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 POU4F1Q01851 419 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 CYP27A1Q02318 531 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 RSPO4Q2I0M5 234 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 TM4SF20Q53R12 229 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 BRAPQ7Z569 592 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 ANKRD13AQ8IZ07 590 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 USHBP1Q8N6Y0 703 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 KREMEN2Q8NCW0 462 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 PIWIL2Q8TC59 973 aaKnown RBP5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 KCTD13Q8WZ19 329 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 MFSD3Q96ES6 412 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 COX4I2Q96KJ9 171 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 SLC12A9Q9BXP2 914 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 ATP13A1Q9HD20 1204 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 PCDH12Q9NPG4 1184 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 CYP26B1Q9NR63 512 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 CLEC1BQ9P126 229 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 SFMBT1Q9UHJ3 866 aa5.55□□□□□ -1.52
HMGB1P17-201ENST00000403495 C2orf71A6NGG8 1288 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 AURKAO14965 403 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 CYP26A1O43174 497 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 DNAJC8O75937 253 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 PROCP04070 461 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 GSNP06396 782 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 VAV1P15498 845 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 HOXC12P31275 282 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 AMPD3Q01432 767 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 ZNF460Q14592 562 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 ZC3H12BQ5HYM0 836 aaKnown RBP5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 RTP2Q5QGT7 225 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 SLC35F1Q5T1Q4 408 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 TSPYL5Q86VY4 417 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 ZDHHC13Q8IUH4 622 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 PPIL6Q8IXY8 311 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 TMEM151AQ8N4L1 468 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 ZNF655Q8N720 491 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 DAGLBQ8NCG7 672 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 FRS2Q8WU20 508 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 TARS2Q9BW92 718 aaKnown RBP5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 TRIM39Q9HCM9 518 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 SEMA3GQ9NS98 782 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 AP5S1Q9NUS5 200 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 GPATCH2Q9NW75 528 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 PRR13Q9NZ81 148 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 ZC3H7BQ9UGR2 993 aaKnown RBP5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 PCDHA11Q9Y5I1 949 aa5.54□□□□□ -1.52
HMGB1P17-201ENST00000403495 A0A087X0B3 334 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 PRR19A6NJB7 356 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 PDE8AO60658 829 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 MSCO60682 206 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 LCP1P13796 627 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 PLS3P13797 630 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 LTKP29376 864 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 CNGA1P29973 690 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 EVA1CP58658 441 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 MAP4K2Q12851 820 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 FNDC3BQ53EP0 1204 aaKnown RBP5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 NKAPLQ5M9Q1 402 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 THNSL2Q86YJ6 484 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 CREG2Q8IUH2 290 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 CCDC103Q8IW40 242 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 SYNPOQ8N3V7 929 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 NPLOC4Q8TAT6 608 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 COPS5Q92905 334 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 SCLYQ96I15 445 aa5.53□□□□□ -1.52
HMGB1P17-201ENST00000403495 SPOCK3Q9BQ16 436 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms