RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 PPP1R3GB7ZBB8 358 aa15.85■□□□□ 0.13
ATG3-202ENST00000402314 DHX8Q14562 1220 aaKnown RBP15.85■□□□□ 0.13
ATG3-202ENST00000402314 NR1I3Q14994 352 aa15.85■□□□□ 0.13
ATG3-202ENST00000402314 PNMA1Q8ND90 353 aa15.85■□□□□ 0.13
ATG3-202ENST00000402314 KAT14Q9H8E8 782 aa15.85■□□□□ 0.13
ATG3-202ENST00000402314 CALM1P0DP23 149 aa15.85■□□□□ 0.13
ATG3-202ENST00000402314 CALM2P0DP24 149 aa15.85■□□□□ 0.13
ATG3-202ENST00000402314 CALM3P0DP25 149 aa15.85■□□□□ 0.13
ATG3-202ENST00000402314 ATP2C1P98194 919 aaPredicted RBP15.85■□□□□ 0.13
ATG3-202ENST00000402314 PPP2R5BQ15173 497 aa15.85■□□□□ 0.13
ATG3-202ENST00000402314 SH3RF1Q7Z6J0 888 aa15.85■□□□□ 0.13
ATG3-202ENST00000402314 VPS16Q9H269 839 aa15.85■□□□□ 0.13
ATG3-202ENST00000402314 MKNK2Q9HBH9 465 aa15.85■□□□□ 0.13
ATG3-202ENST00000402314 ATP8A2Q9NTI2 1148 aa15.85■□□□□ 0.13
ATG3-202ENST00000402314 RTCBQ9Y3I0 505 aaKnown RBP15.85■□□□□ 0.13
ATG3-202ENST00000402314 PFKFB3Q16875 520 aaPredicted RBP15.84■□□□□ 0.13
ATG3-202ENST00000402314 KANK3Q6NY19 840 aa15.84■□□□□ 0.13
ATG3-202ENST00000402314 GDAQ9Y2T3 454 aa15.84■□□□□ 0.13
ATG3-202ENST00000402314 WNK3Q9BYP7 1800 aa15.84■□□□□ 0.13
ATG3-202ENST00000402314 CCT5P48643 541 aa15.84■□□□□ 0.13
ATG3-202ENST00000402314 RRAGBQ5VZM2 374 aa15.84■□□□□ 0.13
ATG3-202ENST00000402314 CEP112Q8N8E3 955 aa15.84■□□□□ 0.13
ATG3-202ENST00000402314 PSD3Q9NYI0 1048 aa15.84■□□□□ 0.13
ATG3-202ENST00000402314 DACH1Q9UI36 760 aa15.84■□□□□ 0.13
ATG3-202ENST00000402314 CYTH3O43739 400 aa15.84■□□□□ 0.13
ATG3-202ENST00000402314 LDHBP07195 334 aaKnown RBP15.84■□□□□ 0.13
ATG3-202ENST00000402314 HEATR3Q7Z4Q2 680 aa15.84■□□□□ 0.13
ATG3-202ENST00000402314 FERMT2Q96AC1 680 aa15.84■□□□□ 0.13
ATG3-202ENST00000402314 NYXQ9GZU5 481 aa15.84■□□□□ 0.13
ATG3-202ENST00000402314 ANKRD2Q9GZV1 360 aa15.84■□□□□ 0.13
ATG3-202ENST00000402314 TMEM60Q9H2L4 133 aa15.84■□□□□ 0.13
ATG3-202ENST00000402314 ARPP21Q9UBL0 812 aaPredicted RBP15.84■□□□□ 0.13
ATG3-202ENST00000402314 CNTNAP4Q9C0A0 1308 aa15.83■□□□□ 0.13
ATG3-202ENST00000402314 C12orf60Q5U649 245 aa15.83■□□□□ 0.12
ATG3-202ENST00000402314 FBXW10Q5XX13 1052 aa15.83■□□□□ 0.12
ATG3-202ENST00000402314 ELOA2Q8IYF1 753 aaPredicted RBP15.83■□□□□ 0.12
ATG3-202ENST00000402314 AHDC1Q5TGY3 1603 aaPredicted RBP15.83■□□□□ 0.12
ATG3-202ENST00000402314 INF2Q27J81 1249 aa15.83■□□□□ 0.12
ATG3-202ENST00000402314 SPATA1Q5VX52 437 aa15.83■□□□□ 0.12
ATG3-202ENST00000402314 TRIML1Q8N9V2 468 aa15.83■□□□□ 0.12
ATG3-202ENST00000402314 VAT1LQ9HCJ6 419 aa15.83■□□□□ 0.12
ATG3-202ENST00000402314 SAMM50Q9Y512 469 aa15.83■□□□□ 0.12
ATG3-202ENST00000402314 A0A1B0GTH6 734 aa15.82■□□□□ 0.12
ATG3-202ENST00000402314 SEMA3EO15041 775 aa15.82■□□□□ 0.12
ATG3-202ENST00000402314 BLIDQ8IZY5 108 aa15.82■□□□□ 0.12
ATG3-202ENST00000402314 NUP88Q99567 741 aaPredicted RBP15.82■□□□□ 0.12
ATG3-202ENST00000402314 DEF6Q9H4E7 631 aa15.82■□□□□ 0.12
ATG3-202ENST00000402314 ERCC5P28715 1186 aaPredicted RBP15.82■□□□□ 0.12
ATG3-202ENST00000402314 TAB2Q9NYJ8 693 aa15.82■□□□□ 0.12
ATG3-202ENST00000402314 NRAPQ86VF7 1730 aa15.82■□□□□ 0.12
ATG3-202ENST00000402314 COL22A1Q8NFW1 1626 aaPredicted RBP15.81■□□□□ 0.12
ATG3-202ENST00000402314 TRIM49BA6NDI0 452 aa15.81■□□□□ 0.12
ATG3-202ENST00000402314 TSPY3P0CV98 308 aa15.81■□□□□ 0.12
ATG3-202ENST00000402314 TSPY8P0CW00 308 aa15.81■□□□□ 0.12
ATG3-202ENST00000402314 RFC4P35249 363 aa15.81■□□□□ 0.12
ATG3-202ENST00000402314 PDXDC2PQ6P474 469 aa15.81■□□□□ 0.12
ATG3-202ENST00000402314 FAM196AQ6ZSG2 479 aa15.81■□□□□ 0.12
ATG3-202ENST00000402314 RASSF8Q8NHQ8 419 aa15.81■□□□□ 0.12
ATG3-202ENST00000402314 CHP1Q99653 195 aa15.81■□□□□ 0.12
ATG3-202ENST00000402314 NAPGQ99747 312 aaPredicted RBP15.81■□□□□ 0.12
ATG3-202ENST00000402314 MKRN1Q9UHC7 482 aaKnown RBP15.81■□□□□ 0.12
ATG3-202ENST00000402314 EP400NLQ6ZTU2 488 aa15.81■□□□□ 0.12
ATG3-202ENST00000402314 IQUBQ8NA54 791 aa15.81■□□□□ 0.12
ATG3-202ENST00000402314 AFAP1L1Q8TED9 768 aa15.81■□□□□ 0.12
ATG3-202ENST00000402314 ADD3Q9UEY8 706 aaKnown RBP15.81■□□□□ 0.12
ATG3-202ENST00000402314 GGCXP38435 758 aa15.81■□□□□ 0.12
ATG3-202ENST00000402314 CORO7P57737 925 aa15.81■□□□□ 0.12
ATG3-202ENST00000402314 LRRC15Q8TF66 581 aa15.81■□□□□ 0.12
ATG3-202ENST00000402314 MAD2L2Q9UI95 211 aa15.81■□□□□ 0.12
ATG3-202ENST00000402314 MYBL2P10244 700 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 MATR3P43243 847 aaKnown RBP eCLIP15.8■□□□□ 0.12
ATG3-202ENST00000402314 ERVK-24P63145 666 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 SBK1Q52WX2 424 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 PPM1EQ8WY54 764 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 GSDMAQ96QA5 445 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 RAB21Q9UL25 225 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 IRS2Q9Y4H2 1338 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 SCN7AQ01118 1682 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 RREB1Q92766 1687 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 ZNF185O15231 689 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 SYF2O95926 243 aaKnown RBP15.8■□□□□ 0.12
ATG3-202ENST00000402314 GYPCP04921 128 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 KIF5BP33176 963 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 MNAT1P51948 309 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 KCTD19Q17RG1 926 aaPredicted RBP15.8■□□□□ 0.12
ATG3-202ENST00000402314 C4orf32Q8N8J7 132 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 FAM71BQ8TC56 605 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 MMS19Q96T76 1030 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 PSMB7Q99436 277 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 TMEM47Q9BQJ4 181 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 MYO6Q9UM54 1294 aa15.8■□□□□ 0.12
ATG3-202ENST00000402314 A0A1B0GUL6 1792 aa15.79■□□□□ 0.12
ATG3-202ENST00000402314 PCP11498 1178 aaKnown RBP15.79■□□□□ 0.12
ATG3-202ENST00000402314 GUCY2CP25092 1073 aa15.79■□□□□ 0.12
ATG3-202ENST00000402314 KRT31Q15323 416 aa15.79■□□□□ 0.12
ATG3-202ENST00000402314 CDKAL1Q5VV42 579 aa15.79■□□□□ 0.12
ATG3-202ENST00000402314 USP17L2Q6R6M4 530 aa15.79■□□□□ 0.12
ATG3-202ENST00000402314 DHX37Q8IY37 1157 aaKnown RBP15.79■□□□□ 0.12
ATG3-202ENST00000402314 ZNF444Q8N0Y2 327 aaPredicted RBP15.79■□□□□ 0.12
ATG3-202ENST00000402314 MSANTD4Q8NCY6 345 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms