RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 FAM126BQ8IXS8 530 aa17.4■□□□□ 0.38
VAMP1-203ENST00000400911 CCDC144CPQ8IYA2 1237 aa17.4■□□□□ 0.38
VAMP1-203ENST00000400911 OSBP2Q969R2 916 aa17.4■□□□□ 0.38
VAMP1-203ENST00000400911 LRRCC1Q9C099 1032 aa17.4■□□□□ 0.38
VAMP1-203ENST00000400911 PRDM12Q9H4Q4 367 aa17.4■□□□□ 0.38
VAMP1-203ENST00000400911 FEM1BQ9UK73 627 aa17.4■□□□□ 0.38
VAMP1-203ENST00000400911 XIRP2A4UGR9 3374 aa17.39■□□□□ 0.37
VAMP1-203ENST00000400911 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.39■□□□□ 0.37
VAMP1-203ENST00000400911 ZNF444Q8N0Y2 327 aaPredicted RBP17.39■□□□□ 0.37
VAMP1-203ENST00000400911 LRRC47Q8N1G4 583 aaKnown RBP17.39■□□□□ 0.37
VAMP1-203ENST00000400911 CHST13Q8NET6 341 aa17.39■□□□□ 0.37
VAMP1-203ENST00000400911 MKL1Q969V6 931 aa17.39■□□□□ 0.37
VAMP1-203ENST00000400911 CEP95Q96GE4 821 aa17.39■□□□□ 0.37
VAMP1-203ENST00000400911 GAS2L1Q99501 681 aaPredicted RBP17.39■□□□□ 0.37
VAMP1-203ENST00000400911 KATNBL1Q9H079 304 aa17.39■□□□□ 0.37
VAMP1-203ENST00000400911 HOMER2Q9NSB8 354 aa17.39■□□□□ 0.37
VAMP1-203ENST00000400911 MTMR4Q9NYA4 1195 aa17.39■□□□□ 0.37
VAMP1-203ENST00000400911 FBXO40Q9UH90 709 aa17.39■□□□□ 0.37
VAMP1-203ENST00000400911 TNFRSF10AO00220 468 aa17.38■□□□□ 0.37
VAMP1-203ENST00000400911 CYP2C18P33260 490 aa17.38■□□□□ 0.37
VAMP1-203ENST00000400911 BEX3Q00994 111 aa17.38■□□□□ 0.37
VAMP1-203ENST00000400911 CNTN2Q02246 1040 aa17.38■□□□□ 0.37
VAMP1-203ENST00000400911 NOL8Q76FK4 1167 aaKnown RBP17.38■□□□□ 0.37
VAMP1-203ENST00000400911 ECHDC1Q9NTX5 307 aa17.38■□□□□ 0.37
VAMP1-203ENST00000400911 CHD9Q3L8U1 2897 aa17.37■□□□□ 0.37
VAMP1-203ENST00000400911 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.37■□□□□ 0.37
VAMP1-203ENST00000400911 TLR3O15455 904 aaKnown RBP17.37■□□□□ 0.37
VAMP1-203ENST00000400911 TTLL1O95922 423 aa17.37■□□□□ 0.37
VAMP1-203ENST00000400911 APPP05067 770 aa17.37■□□□□ 0.37
VAMP1-203ENST00000400911 OAZ1P54368 228 aa17.37■□□□□ 0.37
VAMP1-203ENST00000400911 TNFAIP2Q03169 654 aa17.37■□□□□ 0.37
VAMP1-203ENST00000400911 SLFN13Q68D06 897 aa17.37■□□□□ 0.37
VAMP1-203ENST00000400911 PSRC1Q6PGN9 363 aaPredicted RBP17.37■□□□□ 0.37
VAMP1-203ENST00000400911 CXCL17Q6UXB2 119 aa17.37■□□□□ 0.37
VAMP1-203ENST00000400911 KBTBD3Q8NAB2 608 aa17.37■□□□□ 0.37
VAMP1-203ENST00000400911 GMCL1P1Q8NEA9 526 aa17.37■□□□□ 0.37
VAMP1-203ENST00000400911 EPB41L4AQ9HCS5 686 aaPredicted RBP17.37■□□□□ 0.37
VAMP1-203ENST00000400911 IL23AQ9NPF7 189 aa17.37■□□□□ 0.37
VAMP1-203ENST00000400911 CXXC1Q9P0U4 656 aaPredicted RBP17.37■□□□□ 0.37
VAMP1-203ENST00000400911 SMCHD1A6NHR9 2005 aa17.37■□□□□ 0.37
VAMP1-203ENST00000400911 RNF113AO15541 343 aaKnown RBP17.36■□□□□ 0.37
VAMP1-203ENST00000400911 GPAA1O43292 621 aa17.36■□□□□ 0.37
VAMP1-203ENST00000400911 CD4P01730 458 aa17.36■□□□□ 0.37
VAMP1-203ENST00000400911 BMP3P12645 472 aa17.36■□□□□ 0.37
VAMP1-203ENST00000400911 TDO2P48775 406 aa17.36■□□□□ 0.37
VAMP1-203ENST00000400911 NKX3-2P78367 333 aa17.36■□□□□ 0.37
VAMP1-203ENST00000400911 ADGRE1Q14246 886 aa17.36■□□□□ 0.37
VAMP1-203ENST00000400911 CCDC85BQ15834 202 aaPredicted RBP17.36■□□□□ 0.37
VAMP1-203ENST00000400911 AKNAD1Q5T1N1 836 aa17.36■□□□□ 0.37
VAMP1-203ENST00000400911 MIER1Q8N108 512 aa17.36■□□□□ 0.37
VAMP1-203ENST00000400911 ATXN2LQ8WWM7 1075 aaKnown RBP17.36■□□□□ 0.37
VAMP1-203ENST00000400911 HERVK_113Q902F9 699 aa17.36■□□□□ 0.37
VAMP1-203ENST00000400911 APPBP2Q92624 585 aa17.36■□□□□ 0.37
VAMP1-203ENST00000400911 CHMP4CQ96CF2 233 aa17.36■□□□□ 0.37
VAMP1-203ENST00000400911 CHMP4BQ9H444 224 aaKnown RBP17.36■□□□□ 0.37
VAMP1-203ENST00000400911 ZNF287Q9HBT7 754 aa17.36■□□□□ 0.37
VAMP1-203ENST00000400911 MSRAQ9UJ68 235 aa17.36■□□□□ 0.37
VAMP1-203ENST00000400911 SOWAHBA6NEL2 793 aa17.35■□□□□ 0.37
VAMP1-203ENST00000400911 TMEM232C9JQI7 657 aa17.35■□□□□ 0.37
VAMP1-203ENST00000400911 M0R2C6 588 aa17.35■□□□□ 0.37
VAMP1-203ENST00000400911 FGBP02675 491 aa17.35■□□□□ 0.37
VAMP1-203ENST00000400911 IGFBP4P22692 258 aa17.35■□□□□ 0.37
VAMP1-203ENST00000400911 PTGS1P23219 599 aa17.35■□□□□ 0.37
VAMP1-203ENST00000400911 TSHZ3Q63HK5 1081 aa17.35■□□□□ 0.37
VAMP1-203ENST00000400911 FAM133AQ8N9E0 248 aa17.35■□□□□ 0.37
VAMP1-203ENST00000400911 SLC43A3Q8NBI5 491 aa17.35■□□□□ 0.37
VAMP1-203ENST00000400911 AGBL1Q96MI9 1066 aa17.35■□□□□ 0.37
VAMP1-203ENST00000400911 ASB2Q96Q27 587 aa17.35■□□□□ 0.37
VAMP1-203ENST00000400911 HIPK3Q9H422 1215 aa17.35■□□□□ 0.37
VAMP1-203ENST00000400911 ACAD9Q9H845 621 aa17.35■□□□□ 0.37
VAMP1-203ENST00000400911 ISY1Q9ULR0 285 aaKnown RBP17.35■□□□□ 0.37
VAMP1-203ENST00000400911 SYNPO2Q9UMS6 1093 aa17.35■□□□□ 0.37
VAMP1-203ENST00000400911 DDX49Q9Y6V7 483 aaKnown RBP17.35■□□□□ 0.37
VAMP1-203ENST00000400911 ASTN1O14525 1302 aa17.35■□□□□ 0.37
VAMP1-203ENST00000400911 TTC28Q96AY4 2481 aa17.35■□□□□ 0.37
VAMP1-203ENST00000400911 PATL2C9JE40 543 aaKnown RBP17.34■□□□□ 0.37
VAMP1-203ENST00000400911 TSPY3P0CV98 308 aa17.34■□□□□ 0.37
VAMP1-203ENST00000400911 TSPY8P0CW00 308 aa17.34■□□□□ 0.37
VAMP1-203ENST00000400911 GNAT2P19087 354 aa17.34■□□□□ 0.37
VAMP1-203ENST00000400911 ITGA7Q13683 1181 aa17.34■□□□□ 0.37
VAMP1-203ENST00000400911 RAB30Q15771 203 aa17.34■□□□□ 0.37
VAMP1-203ENST00000400911 FSCN1Q16658 493 aaKnown RBP17.34■□□□□ 0.37
VAMP1-203ENST00000400911 UMODL1Q5DID0 1318 aa17.34■□□□□ 0.37
VAMP1-203ENST00000400911 OTOP2Q7RTS6 562 aa17.34■□□□□ 0.37
VAMP1-203ENST00000400911 NKX2-4Q9H2Z4 354 aa17.34■□□□□ 0.37
VAMP1-203ENST00000400911 A1CFQ9NQ94 594 aaKnown RBP17.34■□□□□ 0.37
VAMP1-203ENST00000400911 GNEQ9Y223 722 aaKnown RBP17.34■□□□□ 0.37
VAMP1-203ENST00000400911 PARP14Q460N5 1801 aa17.33■□□□□ 0.37
VAMP1-203ENST00000400911 ZNF536O15090 1300 aa17.33■□□□□ 0.36
VAMP1-203ENST00000400911 GRIN2DO15399 1336 aa17.33■□□□□ 0.36
VAMP1-203ENST00000400911 DYNC1LI2O43237 492 aaPredicted RBP17.33■□□□□ 0.36
VAMP1-203ENST00000400911 FDX1P10109 184 aa17.33■□□□□ 0.36
VAMP1-203ENST00000400911 SMPD1P17405 629 aa17.33■□□□□ 0.36
VAMP1-203ENST00000400911 COL9A1P20849 921 aa17.33■□□□□ 0.36
VAMP1-203ENST00000400911 CCL23P55773 120 aa17.33■□□□□ 0.36
VAMP1-203ENST00000400911 TFAP4Q01664 338 aa17.33■□□□□ 0.36
VAMP1-203ENST00000400911 TLK2Q86UE8 772 aa17.33■□□□□ 0.36
VAMP1-203ENST00000400911 IFNL3Q8IZI9 196 aa17.33■□□□□ 0.36
VAMP1-203ENST00000400911 NEDD1Q8NHV4 660 aa17.33■□□□□ 0.36
VAMP1-203ENST00000400911 TRERF1Q96PN7 1200 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms