RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 NOSTRINQ8IVI9 506 aa13.43□□□□□ -0.26
SKA3-203ENST00000400018 ATG4CQ96DT6 458 aa13.43□□□□□ -0.26
SKA3-203ENST00000400018 IQCA1LA6NCM1 817 aa13.43□□□□□ -0.26
SKA3-203ENST00000400018 PPP1R12BO60237 982 aaPredicted RBP13.43□□□□□ -0.26
SKA3-203ENST00000400018 MCM7P33993 719 aa13.43□□□□□ -0.26
SKA3-203ENST00000400018 STAT2P52630 851 aa13.43□□□□□ -0.26
SKA3-203ENST00000400018 USP49Q70CQ1 688 aa13.43□□□□□ -0.26
SKA3-203ENST00000400018 FCHSD1Q86WN1 690 aa13.43□□□□□ -0.26
SKA3-203ENST00000400018 ZNF280CQ8ND82 737 aa13.43□□□□□ -0.26
SKA3-203ENST00000400018 SPZ1Q9BXG8 430 aa13.43□□□□□ -0.26
SKA3-203ENST00000400018 BARHL2Q9NY43 387 aa13.43□□□□□ -0.26
SKA3-203ENST00000400018 RIPK3Q9Y572 518 aa13.43□□□□□ -0.26
SKA3-203ENST00000400018 STK36Q9NRP7 1315 aa13.43□□□□□ -0.26
SKA3-203ENST00000400018 KRT2P35908 639 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 ME1P48163 572 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 KRT85P78386 507 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 CCDC178Q5BJE1 867 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 CST9Q5W186 159 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 ZNF112Q9UJU3 913 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 PCDHA6Q9UN73 950 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 PCDHA8Q9Y5H6 950 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 A0A1B0GVL5 298 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 BACE1P56817 501 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 MAP3K9P80192 1104 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 HTRA3P83110 453 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 PLS1Q14651 629 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 OPTNQ96CV9 577 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 GOLPH3LQ9H4A5 285 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 GOPCQ9HD26 462 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 TMEM63CQ9P1W3 806 aa13.42□□□□□ -0.26
SKA3-203ENST00000400018 OPLAHO14841 1288 aa13.41□□□□□ -0.26
SKA3-203ENST00000400018 ZBTB5O15062 677 aa13.41□□□□□ -0.26
SKA3-203ENST00000400018 BLIDQ8IZY5 108 aa13.41□□□□□ -0.26
SKA3-203ENST00000400018 KIF3AQ9Y496 699 aa13.41□□□□□ -0.26
SKA3-203ENST00000400018 COL2A1P02458 1487 aaPredicted RBP13.41□□□□□ -0.26
SKA3-203ENST00000400018 CFBP00751 764 aa13.41□□□□□ -0.26
SKA3-203ENST00000400018 GMCL1P1Q8NEA9 526 aa13.41□□□□□ -0.26
SKA3-203ENST00000400018 AFG3L2Q9Y4W6 797 aa13.41□□□□□ -0.26
SKA3-203ENST00000400018 CSADQ9Y600 493 aa13.41□□□□□ -0.26
SKA3-203ENST00000400018 U2AF2P26368 475 aaKnown RBP eCLIP13.41□□□□□ -0.26
SKA3-203ENST00000400018 GNAQP50148 359 aa13.41□□□□□ -0.26
SKA3-203ENST00000400018 STK38Q15208 465 aa13.41□□□□□ -0.26
SKA3-203ENST00000400018 SAFBQ15424 915 aaKnown RBP eCLIP13.41□□□□□ -0.26
SKA3-203ENST00000400018 LETM2Q2VYF4 491 aa13.41□□□□□ -0.26
SKA3-203ENST00000400018 GPATCH4Q5T3I0 446 aaKnown RBP13.41□□□□□ -0.26
SKA3-203ENST00000400018 PCDHA7Q9UN72 937 aa13.41□□□□□ -0.26
SKA3-203ENST00000400018 NFIBO00712 420 aa13.4□□□□□ -0.26
SKA3-203ENST00000400018 EDIL3O43854 480 aa13.4□□□□□ -0.26
SKA3-203ENST00000400018 RCAN1P53805 252 aa13.4□□□□□ -0.26
SKA3-203ENST00000400018 MUM1L1Q5H9M0 696 aa13.4□□□□□ -0.26
SKA3-203ENST00000400018 DCAF4Q8WV16 495 aa13.4□□□□□ -0.26
SKA3-203ENST00000400018 TNFRSF25Q93038 417 aa13.4□□□□□ -0.26
SKA3-203ENST00000400018 OTOFQ9HC10 1997 aa13.4□□□□□ -0.26
SKA3-203ENST00000400018 PNMA6FA0A0J9YX94 578 aa13.4□□□□□ -0.27
SKA3-203ENST00000400018 CYP2C8P10632 490 aa13.4□□□□□ -0.27
SKA3-203ENST00000400018 ALAS1P13196 640 aa13.4□□□□□ -0.27
SKA3-203ENST00000400018 ZRSR1Q15695 479 aaKnown RBP13.4□□□□□ -0.27
SKA3-203ENST00000400018 ANO1Q5XXA6 986 aa13.4□□□□□ -0.27
SKA3-203ENST00000400018 CYP2W1Q8TAV3 490 aa13.4□□□□□ -0.27
SKA3-203ENST00000400018 BICD2Q8TD16 824 aa13.4□□□□□ -0.27
SKA3-203ENST00000400018 WASF1Q92558 559 aa13.4□□□□□ -0.27
SKA3-203ENST00000400018 GMCL1Q96IK5 515 aa13.4□□□□□ -0.27
SKA3-203ENST00000400018 PLIN2Q99541 437 aa13.4□□□□□ -0.27
SKA3-203ENST00000400018 TMEM60Q9H2L4 133 aa13.4□□□□□ -0.27
SKA3-203ENST00000400018 PP2D1A8MPX8 630 aa13.39□□□□□ -0.27
SKA3-203ENST00000400018 NR1I2O75469 434 aa13.39□□□□□ -0.27
SKA3-203ENST00000400018 TDP2O95551 362 aa13.39□□□□□ -0.27
SKA3-203ENST00000400018 PNMA8AQ86V59 439 aaPredicted RBP13.39□□□□□ -0.27
SKA3-203ENST00000400018 PDILTQ8N807 584 aa13.39□□□□□ -0.27
SKA3-203ENST00000400018 LINC00301Q8NCQ3 95 aa13.39□□□□□ -0.27
SKA3-203ENST00000400018 HOOK2Q96ED9 719 aa13.39□□□□□ -0.27
SKA3-203ENST00000400018 ZIC5Q96T25 663 aa13.39□□□□□ -0.27
SKA3-203ENST00000400018 MAP3K14Q99558 947 aa13.39□□□□□ -0.27
SKA3-203ENST00000400018 PAGR1Q9BTK6 254 aa13.39□□□□□ -0.27
SKA3-203ENST00000400018 ZSCAN16Q9H4T2 348 aaPredicted RBP13.39□□□□□ -0.27
SKA3-203ENST00000400018 PCDHA4Q9UN74 947 aa13.39□□□□□ -0.27
SKA3-203ENST00000400018 PITPNM2Q9BZ72 1349 aa13.39□□□□□ -0.27
SKA3-203ENST00000400018 SORBS3O60504 671 aa13.39□□□□□ -0.27
SKA3-203ENST00000400018 TBCKQ8TEA7 893 aa13.39□□□□□ -0.27
SKA3-203ENST00000400018 FBXO11Q86XK2 927 aa13.38□□□□□ -0.27
SKA3-203ENST00000400018 KIAA1683Q9H0B3 1180 aa13.38□□□□□ -0.27
SKA3-203ENST00000400018 PSTPIP2Q9H939 334 aa13.38□□□□□ -0.27
SKA3-203ENST00000400018 ZNF536O15090 1300 aa13.38□□□□□ -0.27
SKA3-203ENST00000400018 GOLGA6L22H0YM25 854 aa13.38□□□□□ -0.27
SKA3-203ENST00000400018 XBP1P17861 261 aa13.38□□□□□ -0.27
SKA3-203ENST00000400018 IREB2P48200 963 aaKnown RBP13.38□□□□□ -0.27
SKA3-203ENST00000400018 PPP2R5BQ15173 497 aa13.38□□□□□ -0.27
SKA3-203ENST00000400018 CLEC17AQ6ZS10 378 aa13.38□□□□□ -0.27
SKA3-203ENST00000400018 LDHDQ86WU2 507 aa13.38□□□□□ -0.27
SKA3-203ENST00000400018 PKD2L1Q9P0L9 805 aa13.38□□□□□ -0.27
SKA3-203ENST00000400018 CCDC194A0A1B0GVG4 234 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 DDX11L8A8MPP1 907 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 M0R2N6 131 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 NF2P35240 595 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 PTPAQ15257 358 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 IL17AQ16552 155 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 CKAP2LQ8IYA6 745 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 GPBP1L1Q9HC44 474 aaPredicted RBP13.37□□□□□ -0.27
SKA3-203ENST00000400018 CCPG1Q9ULG6 757 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 SYCE3A1L190 88 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms