RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 GOLGA8FQ08AF8 430 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 GOLGA8DPQ0D2H9 430 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 KARSQ15046 597 aaKnown RBP13.34□□□□□ -0.27
COL25A1-202ENST00000399127 SHROOM1Q2M3G4 852 aaPredicted RBP13.34□□□□□ -0.27
COL25A1-202ENST00000399127 PODNQ7Z5L7 613 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 PLIN2Q99541 437 aa13.34□□□□□ -0.27
COL25A1-202ENST00000399127 OSBPL5Q9H0X9 879 aaPredicted RBP13.34□□□□□ -0.27
COL25A1-202ENST00000399127 SAMSN1Q9NSI8 373 aaKnown RBP13.34□□□□□ -0.27
COL25A1-202ENST00000399127 MORC2Q9Y6X9 1032 aaPredicted RBP13.34□□□□□ -0.27
COL25A1-202ENST00000399127 RAD21O60216 631 aa13.33□□□□□ -0.28
COL25A1-202ENST00000399127 CD44P16070 742 aaKnown RBP13.33□□□□□ -0.28
COL25A1-202ENST00000399127 SHMT1P34896 483 aa13.33□□□□□ -0.28
COL25A1-202ENST00000399127 DPYDQ12882 1025 aa13.33□□□□□ -0.28
COL25A1-202ENST00000399127 E2F4Q16254 413 aa13.33□□□□□ -0.28
COL25A1-202ENST00000399127 SH3RF1Q7Z6J0 888 aa13.33□□□□□ -0.28
COL25A1-202ENST00000399127 CCDC34Q96HJ3 373 aa13.33□□□□□ -0.28
COL25A1-202ENST00000399127 NEMFO60524 1076 aa13.33□□□□□ -0.28
COL25A1-202ENST00000399127 KCNA3P22001 575 aa13.33□□□□□ -0.28
COL25A1-202ENST00000399127 LETM2Q2VYF4 491 aa13.33□□□□□ -0.28
COL25A1-202ENST00000399127 JAKMIP3Q5VZ66 844 aa13.33□□□□□ -0.28
COL25A1-202ENST00000399127 IQUBQ8NA54 791 aa13.33□□□□□ -0.28
COL25A1-202ENST00000399127 RASSF8Q8NHQ8 419 aa13.33□□□□□ -0.28
COL25A1-202ENST00000399127 COA7Q96BR5 231 aa13.33□□□□□ -0.28
COL25A1-202ENST00000399127 MTRQ99707 1265 aa13.33□□□□□ -0.28
COL25A1-202ENST00000399127 ZMYND12Q9H0C1 365 aa13.33□□□□□ -0.28
COL25A1-202ENST00000399127 BIN2Q9UBW5 565 aaPredicted RBP13.33□□□□□ -0.28
COL25A1-202ENST00000399127 MYH8P13535 1937 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 SFPQP23246 707 aaKnown RBP eCLIP13.32□□□□□ -0.28
COL25A1-202ENST00000399127 GSDMDP57764 484 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 CUL4BQ13620 913 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 CCDC93Q567U6 631 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 CC2D2BQ6DHV5 1058 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 TRIML1Q8N9V2 468 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 DAGLBQ8NCG7 672 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 INTS13Q9NVM9 706 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 TMEM260Q9NX78 707 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 IMPACTQ9P2X3 320 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 DACH1Q9UI36 760 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 CCNT1O60563 726 aaKnown RBP13.32□□□□□ -0.28
COL25A1-202ENST00000399127 SOGA3Q5TF21 947 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 ARL6IP4Q66PJ3 421 aaKnown RBP13.32□□□□□ -0.28
COL25A1-202ENST00000399127 PDXDC2PQ6P474 469 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 HHIPL2Q6UWX4 724 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 DTHD1Q6ZMT9 781 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 SUPT20HQ8NEM7 779 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 MTFR1LQ9H019 292 aa13.32□□□□□ -0.28
COL25A1-202ENST00000399127 SCN9AQ15858 1988 aa13.31□□□□□ -0.28
COL25A1-202ENST00000399127 TTLL1O95922 423 aa13.31□□□□□ -0.28
COL25A1-202ENST00000399127 TTBK2Q6IQ55 1244 aa13.31□□□□□ -0.28
COL25A1-202ENST00000399127 ZNF771Q7L3S4 317 aaPredicted RBP13.31□□□□□ -0.28
COL25A1-202ENST00000399127 ZSCAN29Q8IWY8 852 aaPredicted RBP13.31□□□□□ -0.28
COL25A1-202ENST00000399127 MYRIPQ8NFW9 859 aa13.31□□□□□ -0.28
COL25A1-202ENST00000399127 C6orf50Q9HD87 102 aa13.31□□□□□ -0.28
COL25A1-202ENST00000399127 ZNF277Q9NRM2 450 aaPredicted RBP13.31□□□□□ -0.28
COL25A1-202ENST00000399127 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
COL25A1-202ENST00000399127 CBFA2T2O43439 604 aa13.31□□□□□ -0.28
COL25A1-202ENST00000399127 HLA-DOAP06340 250 aa13.31□□□□□ -0.28
COL25A1-202ENST00000399127 TNNT1P13805 278 aa13.31□□□□□ -0.28
COL25A1-202ENST00000399127 SLC16A2P36021 539 aa13.31□□□□□ -0.28
COL25A1-202ENST00000399127 LONP1P36776 959 aaKnown RBP13.31□□□□□ -0.28
COL25A1-202ENST00000399127 STAT6P42226 847 aa13.31□□□□□ -0.28
COL25A1-202ENST00000399127 NOVP48745 357 aa13.31□□□□□ -0.28
COL25A1-202ENST00000399127 GALNT17Q6IS24 598 aa13.31□□□□□ -0.28
COL25A1-202ENST00000399127 KCTD1Q719H9 257 aa13.31□□□□□ -0.28
COL25A1-202ENST00000399127 ENOX1Q8TC92 643 aaKnown RBP13.31□□□□□ -0.28
COL25A1-202ENST00000399127 CCDC12Q8WUD4 166 aaPredicted RBP13.31□□□□□ -0.28
COL25A1-202ENST00000399127 ZNF592Q92610 1267 aa13.31□□□□□ -0.28
COL25A1-202ENST00000399127 DNAJC18Q9H819 358 aa13.31□□□□□ -0.28
COL25A1-202ENST00000399127 IGKV6D-41A0A0C4DH26 115 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 ZNF18P17022 549 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 TXLNAP40222 546 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 DACT2Q5SW24 774 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 PRIMPOLQ96LW4 560 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 MAPK8IP1Q9UQF2 711 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 PLIN4Q96Q06 1357 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 DDTLA6NHG4 134 aaPredicted RBP13.3□□□□□ -0.28
COL25A1-202ENST00000399127 GNA11P29992 359 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 NONOQ15233 471 aaKnown RBP eCLIP13.3□□□□□ -0.28
COL25A1-202ENST00000399127 CCDC96Q2M329 555 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 SAMD1Q6SPF0 538 aaPredicted RBP13.3□□□□□ -0.28
COL25A1-202ENST00000399127 VSTM4Q8IW00 320 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 RTKN2Q8IZC4 609 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 REXO1Q8N1G1 1221 aaKnown RBP13.3□□□□□ -0.28
COL25A1-202ENST00000399127 LARGE2Q8N3Y3 721 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 CCDC150Q8NCX0 1101 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 TBCKQ8TEA7 893 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 UPF1Q92900 1129 aaKnown RBP eCLIP13.3□□□□□ -0.28
COL25A1-202ENST00000399127 GSDMAQ96QA5 445 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 RIOX1Q9H6W3 641 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 PIM2Q9P1W9 311 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 SWAP70Q9UH65 585 aa13.3□□□□□ -0.28
COL25A1-202ENST00000399127 SYNRGQ9UMZ2 1314 aa13.29□□□□□ -0.28
COL25A1-202ENST00000399127 PPP1R3GB7ZBB8 358 aa13.29□□□□□ -0.28
COL25A1-202ENST00000399127 RIOK3O14730 519 aaKnown RBP13.29□□□□□ -0.28
COL25A1-202ENST00000399127 UBA7P41226 1012 aa13.29□□□□□ -0.28
COL25A1-202ENST00000399127 STRIP1Q5VSL9 837 aa13.29□□□□□ -0.28
COL25A1-202ENST00000399127 ZDHHC15Q96MV8 337 aa13.29□□□□□ -0.28
COL25A1-202ENST00000399127 DISC1Q9NRI5 854 aa13.29□□□□□ -0.28
COL25A1-202ENST00000399127 CTNND2Q9UQB3 1225 aa13.29□□□□□ -0.28
COL25A1-202ENST00000399127 ERCC5P28715 1186 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms