RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 IVNS1ABPQ9Y6Y0 642 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 CDC42BPGQ6DT37 1551 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 GCFC2P16383 781 aaKnown RBP9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 ASPHQ12797 758 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 CDC37Q16543 378 aaPredicted RBP9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 C2CD5Q86YS7 1000 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 RIOK1Q9BRS2 568 aaKnown RBP9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 CAPS2Q9BXY5 557 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 MTMR6Q9Y217 621 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 CPSF1Q10570 1443 aaKnown RBP9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 MYCLP12524 364 aaPredicted RBP9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 MFAP3P55082 362 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 KRT71Q3SY84 523 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 FANCBQ8NB91 859 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 WDR17Q8IZU2 1322 aa9.18□□□□□ -0.94
SPTLC3-201ENST00000399002 LMTK3Q96Q04 1460 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 ATF2P15336 505 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 ALCAMQ13740 583 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 DYMQ7RTS9 669 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 PHKBQ93100 1093 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 ABCA8O94911 1581 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 RFX7Q2KHR2 1363 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 TET3O43151 1660 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 MAGI2Q86UL8 1455 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 PSMD2Q13200 908 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 PRPSAP1Q14558 356 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 KMT5BQ4FZB7 885 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 ZC3H15Q8WU90 426 aaKnown RBP9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 LAMC1P11047 1609 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 REREQ9P2R6 1566 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 ZNF853P0CG23 659 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 CUL4BQ13620 913 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 TFDP1Q14186 410 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 RNF26Q9BY78 433 aaPredicted RBP9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 LSG1Q9H089 658 aaKnown RBP9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 PSTPIP2Q9H939 334 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 CNOT10Q9H9A5 744 aaKnown RBP9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 ARMCX3Q9UH62 379 aaPredicted RBP9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 PCDHA4Q9UN74 947 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 KCNJ14Q9UNX9 436 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 NLRP1Q9C000 1473 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 GSPT1P15170 499 aaKnown RBP9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 DMP1Q13316 513 aaPredicted RBP9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 MAPK8IP2Q13387 824 aaPredicted RBP9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 TRMT2AQ8IZ69 625 aaKnown RBP9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 PBKQ96KB5 322 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 THAP9Q9H5L6 903 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 VPS54Q9P1Q0 977 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 NCKAP5LQ9HCH0 1330 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 UBAP1LF5GYI3 381 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 PPP2R5AQ15172 486 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 DCAF15Q66K64 600 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 NIM1KQ8IY84 436 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 TGFBRAP1Q8WUH2 860 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 EPSTI1Q96J88 318 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 JPH2Q9BR39 696 aaPredicted RBP9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 BLZF1Q9H2G9 400 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 SPATA31E1Q6ZUB1 1445 aa9.17□□□□□ -0.94
SPTLC3-201ENST00000399002 HSPA8P11142 646 aaKnown RBP9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 PHKG2P15735 406 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 GNGT1P63211 74 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 ARHGEF16Q5VV41 709 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 CDKL2Q92772 493 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 RRAGDQ9NQL2 400 aaPredicted RBP9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 TMEM63CQ9P1W3 806 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 USTQ9Y2C2 406 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 JAK2O60674 1132 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 HSPD1P10809 573 aaKnown RBP9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 LIG4P49917 911 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 COPB1P53618 953 aaKnown RBP9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 TRIM50Q86XT4 487 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 HECW2Q9P2P5 1572 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 SRGAP2BP0DMP2 458 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 HARSP12081 509 aaKnown RBP9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 EPHB4P54760 987 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 SRRM1Q8IYB3 904 aaKnown RBP9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 ZNF594Q96JF6 807 aaPredicted RBP9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 COPRSQ9NQ92 184 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 PKD2L1Q9P0L9 805 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 BIN2Q9UBW5 565 aaPredicted RBP9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 DDX41Q9UJV9 622 aaKnown RBP9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 MYL7Q01449 175 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 GABPAQ06546 454 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 GSDMBQ8TAX9 411 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 BCL2L12Q9HB09 334 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 SH3GLB2Q9NR46 395 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 RWDD2AQ9UIY3 292 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 JRKLQ9Y4A0 524 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 K7ENM7 598 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 KCNK3O14649 394 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 LPXNO60711 386 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 ZMYM1Q5SVZ6 1142 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 ZNF658Q5TYW1 1059 aaPredicted RBP9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 PPP1R13BQ96KQ4 1090 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 NRBP2Q9NSY0 501 aa9.16□□□□□ -0.94
SPTLC3-201ENST00000399002 ERVK-7P63135 1459 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms