RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 KCTD1Q719H9 257 aa12.77□□□□□ -0.36
PCDHGA8-201ENST00000398604 DAAM2Q86T65 1068 aa12.77□□□□□ -0.36
PCDHGA8-201ENST00000398604 ZNF589Q86UQ0 364 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA8-201ENST00000398604 DDX12PQ92771 950 aa12.77□□□□□ -0.36
PCDHGA8-201ENST00000398604 NOX5Q96PH1 765 aa12.77□□□□□ -0.36
PCDHGA8-201ENST00000398604 SCG2P13521 617 aa12.77□□□□□ -0.37
PCDHGA8-201ENST00000398604 ZNF75DP51815 510 aa12.77□□□□□ -0.37
PCDHGA8-201ENST00000398604 NLRP12P59046 1061 aa12.77□□□□□ -0.37
PCDHGA8-201ENST00000398604 MAP2P11137 1827 aaKnown RBP12.77□□□□□ -0.37
PCDHGA8-201ENST00000398604 VPS41P49754 854 aa12.77□□□□□ -0.37
PCDHGA8-201ENST00000398604 C8orf74Q6P047 294 aa12.77□□□□□ -0.37
PCDHGA8-201ENST00000398604 DESI2Q9BSY9 194 aa12.77□□□□□ -0.37
PCDHGA8-201ENST00000398604 CPDO75976 1380 aa12.77□□□□□ -0.37
PCDHGA8-201ENST00000398604 PPP1R2P41236 205 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 PTPN21Q16825 1174 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 SYNE4Q8N205 404 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 DCPSQ96C86 337 aaKnown RBP12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 GJD4Q96KN9 370 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 UBR1Q8IWV7 1749 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 CACNB3P54284 484 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 NKX1-1Q15270 411 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 GNPTABQ3T906 1256 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 CYP26C1Q6V0L0 522 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 PLA2G4DQ86XP0 818 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 ZNF274Q96GC6 653 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 CCDC94Q9BW85 323 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 OSBPL3Q9H4L5 887 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 CCPG1Q9ULG6 757 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 MTMR6Q9Y217 621 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 KDRP35968 1356 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 LRRIQ4A6NIV6 560 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 RIOK3O14730 519 aaKnown RBP12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 ZNF500O60304 480 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 PDIA3P30101 505 aaKnown RBP12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 YARSP54577 528 aaKnown RBP12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 LLGL1Q15334 1064 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 VWA3BQ502W6 1294 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 SESTD1Q86VW0 696 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 TAB3Q8N5C8 712 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 NAPGQ99747 312 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 KIAA1468Q9P260 1216 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 HEG1Q9ULI3 1381 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 SLFNL1Q499Z3 407 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 NEK8Q86SG6 692 aa12.76□□□□□ -0.37
PCDHGA8-201ENST00000398604 M0QZ92 97 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 PRPF6O94906 941 aaKnown RBP12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 POLR2MP0CAP2 368 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 ATP2A2P16615 1042 aaKnown RBP12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 LIN9Q5TKA1 542 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 DCAF15Q66K64 600 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 ADALQ6DHV7 355 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 CASC4Q6P4E1 433 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 FAM178BQ8IXR5 827 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 CCDC26Q8TAB7 109 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 DYNLL2Q96FJ2 89 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 KIF2CQ99661 725 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 APOL6Q9BWW8 343 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 VIMP08670 466 aaKnown RBP12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 ADAT2Q7Z6V5 191 aaKnown RBP12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 CCDC84Q86UT8 332 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 NLRP10Q86W26 655 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 SMC6Q96SB8 1091 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 MMS19Q96T76 1030 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 SPC25Q9HBM1 224 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 CYP27B1O15528 508 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 MMP10P09238 476 aa12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 CACNB1Q02641 598 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA8-201ENST00000398604 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 USP17L8P0C7I0 530 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 HSPA1LP34931 641 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 PABPC4Q13310 644 aaKnown RBP eCLIP12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 MYRIPQ8NFW9 859 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 SECISBP2LQ93073 1101 aaKnown RBP12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 ZSWIM6Q9HCJ5 1215 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 PPANQ9NQ55 473 aaKnown RBP12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 PCDHA7Q9UN72 937 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 XRCC5P13010 732 aaKnown RBP12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 SCRN1Q12765 414 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 FBXO18Q8NFZ0 1043 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 U2AF1L4Q8WU68 220 aaKnown RBP12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 FTOQ9C0B1 505 aaKnown RBP eCLIP12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 NT5C3AQ9H0P0 336 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 FANCLQ9NW38 375 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 CLIC4Q9Y696 253 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 SNX16P57768 344 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 SCYL2Q6P3W7 929 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 USP17L2Q6R6M4 530 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 BARGINQ6ZT62 677 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 PEX26Q7Z412 305 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 MYOCDQ8IZQ8 938 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 PPM1KQ8N3J5 372 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 SMC1BQ8NDV3 1235 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 LARSQ9P2J5 1176 aaKnown RBP12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 OR52Z1P0C646 297 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 CCDC105Q8IYK2 499 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 PUS7LQ9H0K6 701 aaKnown RBP12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 STAP2Q9UGK3 403 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 ARMCX3Q9UH62 379 aaPredicted RBP12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 XDHP47989 1333 aa12.74□□□□□ -0.37
PCDHGA8-201ENST00000398604 ERVV-1B6SEH8 477 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms