RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 DEPTORQ8TB45 409 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 TRIM4Q9C037 500 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 PCDHA12Q9UN75 941 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 TRPC6Q9Y210 931 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 ABCC4O15439 1325 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 HSPD1P10809 573 aaKnown RBP12.91□□□□□ -0.34
TMF1-201ENST00000398559 ANKRD13CQ8N6S4 541 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 FANCBQ8NB91 859 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 GPKOWQ92917 476 aaPredicted RBP eCLIP12.91□□□□□ -0.34
TMF1-201ENST00000398559 GPHNQ9NQX3 736 aaPredicted RBP12.91□□□□□ -0.34
TMF1-201ENST00000398559 SMIM24O75264 130 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 CCDC93Q567U6 631 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 TRIM50Q86XT4 487 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 CCDC24Q8N4L8 307 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 PASKQ96RG2 1323 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 ZMYND10O75800 440 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 CCDC197Q8NCU1 140 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 KDRP35968 1356 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 BTBD18B2RXH4 712 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 IFNAR2P48551 515 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 ADAM9Q13443 819 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 CNOT6LQ96LI5 555 aaKnown RBP12.91□□□□□ -0.34
TMF1-201ENST00000398559 IWS1Q96ST2 819 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 BTG4Q9NY30 223 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 DDX25Q9UHL0 483 aaKnown RBP12.91□□□□□ -0.34
TMF1-201ENST00000398559 USP17L12C9JPN9 530 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 USP17L21D6R901 530 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 N4BP1O75113 896 aaKnown RBP12.91□□□□□ -0.34
TMF1-201ENST00000398559 SUN1O94901 812 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 YARSP54577 528 aaKnown RBP12.91□□□□□ -0.34
TMF1-201ENST00000398559 RBL2Q08999 1139 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 RBBP5Q15291 538 aaKnown RBP12.91□□□□□ -0.34
TMF1-201ENST00000398559 PTPN21Q16825 1174 aa12.91□□□□□ -0.34
TMF1-201ENST00000398559 RNF168Q8IYW5 571 aaPredicted RBP12.91□□□□□ -0.34
TMF1-201ENST00000398559 INTS9Q9NV88 658 aaKnown RBP12.91□□□□□ -0.34
TMF1-201ENST00000398559 POC1B-GALNT4F8VUJ3 575 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 H2AFZP0C0S5 128 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 KRT3P12035 628 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 RASIP1Q5U651 963 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 H2AFVQ71UI9 128 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 C1orf112Q9NSG2 853 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 SAT1P21673 171 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 EIF4A1P60842 406 aaKnown RBP12.9□□□□□ -0.34
TMF1-201ENST00000398559 RPAINQ86UA6 219 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 SDR42E1Q8WUS8 393 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 PSTPIP2Q9H939 334 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 ATP10BO94823 1461 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 LRRD1A4D1F6 860 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 LIG4P49917 911 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 BFSP1Q12934 665 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 NEK8Q86SG6 692 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 NLRX1Q86UT6 975 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 PPP1R9AQ9ULJ8 1098 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 RNF123Q5XPI4 1314 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 SH3BGRP55822 239 aaPredicted RBP12.9□□□□□ -0.34
TMF1-201ENST00000398559 ARHGAP4P98171 946 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 C2orf54Q08AI8 447 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 MED10Q9BTT4 135 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 MED23Q9ULK4 1368 aa12.9□□□□□ -0.34
TMF1-201ENST00000398559 SPECC1L-ADORA2AF8WAN1 911 aa12.9□□□□□ -0.35
TMF1-201ENST00000398559 MGEA5O60502 916 aa12.9□□□□□ -0.35
TMF1-201ENST00000398559 PTGDRQ13258 359 aa12.9□□□□□ -0.35
TMF1-201ENST00000398559 DPP8Q6V1X1 898 aaPredicted RBP12.9□□□□□ -0.35
TMF1-201ENST00000398559 SLFN12Q8IYM2 578 aa12.9□□□□□ -0.35
TMF1-201ENST00000398559 TDRD7Q8NHU6 1098 aaKnown RBP12.9□□□□□ -0.35
TMF1-201ENST00000398559 PRPF31Q8WWY3 499 aaKnown RBP12.9□□□□□ -0.35
TMF1-201ENST00000398559 HAUS1Q96CS2 278 aa12.9□□□□□ -0.35
TMF1-201ENST00000398559 FAF1Q9UNN5 650 aaPredicted RBP12.9□□□□□ -0.35
TMF1-201ENST00000398559 ZNF148Q9UQR1 794 aa12.9□□□□□ -0.35
TMF1-201ENST00000398559 NPC1L1Q9UHC9 1359 aa12.9□□□□□ -0.35
TMF1-201ENST00000398559 SCG2P13521 617 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 STMN1P16949 149 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 BRDTQ58F21 947 aaPredicted RBP12.89□□□□□ -0.35
TMF1-201ENST00000398559 BBOF1Q8ND07 529 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 CTTNBP2Q8WZ74 1663 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 GSTA1P08263 222 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 GSTA2P09210 222 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 PDIA3P30101 505 aaKnown RBP12.89□□□□□ -0.35
TMF1-201ENST00000398559 RSPH3Q86UC2 560 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 PPM1KQ8N3J5 372 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 CACYBPQ9HB71 228 aaKnown RBP12.89□□□□□ -0.35
TMF1-201ENST00000398559 ZNF518AQ6AHZ1 1483 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 WDR46O15213 610 aaKnown RBP12.89□□□□□ -0.35
TMF1-201ENST00000398559 SORBS3O60504 671 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 IL9RQ01113 521 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 LRCH2Q5VUJ6 765 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 PDZD8Q8NEN9 1154 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 TEKT1Q969V4 418 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 EEF2KMTQ96G04 330 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 CCNL1Q9UK58 526 aaPredicted RBP12.89□□□□□ -0.35
TMF1-201ENST00000398559 TNKSO95271 1327 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 CTSWP56202 376 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 MMEL1Q495T6 779 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 GOLGA8HP0CJ92 632 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 DLATP10515 647 aaKnown RBP12.89□□□□□ -0.35
TMF1-201ENST00000398559 TTBK2Q6IQ55 1244 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 SSH3Q8TE77 659 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 EPB41L5Q9HCM4 733 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 UHRF1BP1Q6BDS2 1440 aa12.89□□□□□ -0.35
TMF1-201ENST00000398559 TCOF1Q13428 1488 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms