RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 AMOTL1Q8IY63 956 aa11.78□□□□□ -0.52
NIFKP1-201ENST00000398317 STK11IPQ8N1F8 1099 aa11.78□□□□□ -0.52
NIFKP1-201ENST00000398317 KRI1Q8N9T8 703 aaKnown RBP11.78□□□□□ -0.52
NIFKP1-201ENST00000398317 LPAR1Q92633 364 aa11.78□□□□□ -0.52
NIFKP1-201ENST00000398317 CCDC17Q96LX7 622 aa11.78□□□□□ -0.52
NIFKP1-201ENST00000398317 UBE2OQ9C0C9 1292 aaKnown RBP11.78□□□□□ -0.52
NIFKP1-201ENST00000398317 PLXNA1Q9UIW2 1896 aa11.78□□□□□ -0.52
NIFKP1-201ENST00000398317 RAD21O60216 631 aa11.77□□□□□ -0.53
NIFKP1-201ENST00000398317 ZMYND10O75800 440 aa11.77□□□□□ -0.53
NIFKP1-201ENST00000398317 TMEM132BQ14DG7 1078 aa11.77□□□□□ -0.53
NIFKP1-201ENST00000398317 GJC2Q5T442 439 aaPredicted RBP11.77□□□□□ -0.53
NIFKP1-201ENST00000398317 TSHZ3Q63HK5 1081 aa11.77□□□□□ -0.53
NIFKP1-201ENST00000398317 OLFML2BQ68BL8 750 aa11.77□□□□□ -0.53
NIFKP1-201ENST00000398317 TDHQ8IZJ6 230 aa11.77□□□□□ -0.53
NIFKP1-201ENST00000398317 MB21D1Q8N884 522 aa11.77□□□□□ -0.53
NIFKP1-201ENST00000398317 SHCBP1Q8NEM2 672 aa11.77□□□□□ -0.53
NIFKP1-201ENST00000398317 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.53
NIFKP1-201ENST00000398317 SH2D4AQ9H788 454 aa11.77□□□□□ -0.53
NIFKP1-201ENST00000398317 FBXO28Q9NVF7 368 aa11.77□□□□□ -0.53
NIFKP1-201ENST00000398317 MYH4Q9Y623 1939 aa11.76□□□□□ -0.53
NIFKP1-201ENST00000398317 WDR46O15213 610 aaKnown RBP11.76□□□□□ -0.53
NIFKP1-201ENST00000398317 MSCO60682 206 aa11.76□□□□□ -0.53
NIFKP1-201ENST00000398317 ZSCAN25Q6NSZ9 544 aa11.76□□□□□ -0.53
NIFKP1-201ENST00000398317 Q7L0L9 218 aa11.76□□□□□ -0.53
NIFKP1-201ENST00000398317 STRBPQ96SI9 672 aaKnown RBP11.76□□□□□ -0.53
NIFKP1-201ENST00000398317 MROH8Q9H579 483 aa11.76□□□□□ -0.53
NIFKP1-201ENST00000398317 DNM1LO00429 736 aa11.75□□□□□ -0.53
NIFKP1-201ENST00000398317 LRIT3Q3SXY7 679 aa11.75□□□□□ -0.53
NIFKP1-201ENST00000398317 FAM83BQ5T0W9 1011 aa11.75□□□□□ -0.53
NIFKP1-201ENST00000398317 OSBP2Q969R2 916 aa11.75□□□□□ -0.53
NIFKP1-201ENST00000398317 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.75□□□□□ -0.53
NIFKP1-201ENST00000398317 KANSL2Q9H9L4 492 aa11.75□□□□□ -0.53
NIFKP1-201ENST00000398317 ECHDC1Q9NTX5 307 aa11.75□□□□□ -0.53
NIFKP1-201ENST00000398317 SLC5A4Q9NY91 659 aa11.75□□□□□ -0.53
NIFKP1-201ENST00000398317 GREB1LQ9C091 1923 aaPredicted RBP11.75□□□□□ -0.53
NIFKP1-201ENST00000398317 GSG1L2A8MUP6 293 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 MINDY4BA8MYZ0 360 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 SEPT4O43236 478 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 SLC25A27O95847 323 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 PGK2P07205 417 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 FCER1AP12319 257 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 SLC4A3P48751 1232 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 RTP1P59025 263 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 ABRAQ8N0Z2 381 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 DEFB123Q8N688 67 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 KBTBD3Q8NAB2 608 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 ARRDC4Q8NCT1 418 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 MAML3Q96JK9 1138 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 MMP19Q99542 508 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 NUP88Q99567 741 aaPredicted RBP11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 GOPCQ9HD26 462 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 ARPP21Q9UBL0 812 aaPredicted RBP11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 PPP1R9AQ9ULJ8 1098 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 ADAMTS5Q9UNA0 930 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 ATP11BQ9Y2G3 1177 aa11.74□□□□□ -0.53
NIFKP1-201ENST00000398317 DDX11L8A8MPP1 907 aa11.73□□□□□ -0.53
NIFKP1-201ENST00000398317 KBTBD13C9JR72 458 aa11.73□□□□□ -0.53
NIFKP1-201ENST00000398317 VWA5AO00534 786 aa11.73□□□□□ -0.53
NIFKP1-201ENST00000398317 RNF113AO15541 343 aaKnown RBP11.73□□□□□ -0.53
NIFKP1-201ENST00000398317 MCM3APO60318 1980 aa11.73□□□□□ -0.53
NIFKP1-201ENST00000398317 RASA1P20936 1047 aa11.73□□□□□ -0.53
NIFKP1-201ENST00000398317 STAT3P40763 770 aa11.73□□□□□ -0.53
NIFKP1-201ENST00000398317 SBK1Q52WX2 424 aa11.73□□□□□ -0.53
NIFKP1-201ENST00000398317 SLC39A5Q6ZMH5 540 aa11.73□□□□□ -0.53
NIFKP1-201ENST00000398317 RIOX2Q8IUF8 465 aa11.73□□□□□ -0.53
NIFKP1-201ENST00000398317 SLC17A8Q8NDX2 589 aa11.73□□□□□ -0.53
NIFKP1-201ENST00000398317 LBHD1Q9BQE6 289 aaPredicted RBP11.73□□□□□ -0.53
NIFKP1-201ENST00000398317 DCTPP1Q9H773 170 aa11.73□□□□□ -0.53
NIFKP1-201ENST00000398317 MKNK2Q9HBH9 465 aa11.73□□□□□ -0.53
NIFKP1-201ENST00000398317 UNC80Q8N2C7 3258 aa11.73□□□□□ -0.53
NIFKP1-201ENST00000398317 LTBP2Q14767 1821 aa11.72□□□□□ -0.53
NIFKP1-201ENST00000398317 M0R2C6 588 aa11.72□□□□□ -0.53
NIFKP1-201ENST00000398317 GPAA1O43292 621 aa11.72□□□□□ -0.53
NIFKP1-201ENST00000398317 CFHP08603 1231 aa11.72□□□□□ -0.53
NIFKP1-201ENST00000398317 TAL1P17542 331 aaPredicted RBP11.72□□□□□ -0.53
NIFKP1-201ENST00000398317 ADCYAP1R1P41586 468 aa11.72□□□□□ -0.53
NIFKP1-201ENST00000398317 LRRC41Q15345 812 aa11.72□□□□□ -0.53
NIFKP1-201ENST00000398317 FAM47AQ5JRC9 791 aa11.72□□□□□ -0.53
NIFKP1-201ENST00000398317 NYAP1Q6ZVC0 841 aa11.72□□□□□ -0.53
NIFKP1-201ENST00000398317 RDH13Q8NBN7 331 aa11.72□□□□□ -0.53
NIFKP1-201ENST00000398317 REPS2Q8NFH8 660 aa11.72□□□□□ -0.53
NIFKP1-201ENST00000398317 APPBP2Q92624 585 aa11.72□□□□□ -0.53
NIFKP1-201ENST00000398317 FERMT2Q96AC1 680 aa11.72□□□□□ -0.53
NIFKP1-201ENST00000398317 GPATCH3Q96I76 525 aa11.72□□□□□ -0.53
NIFKP1-201ENST00000398317 EPB41L4AQ9HCS5 686 aaPredicted RBP11.72□□□□□ -0.53
NIFKP1-201ENST00000398317 ZNF214Q9UL59 606 aaPredicted RBP11.72□□□□□ -0.53
NIFKP1-201ENST00000398317 F5H6K3 240 aa11.71□□□□□ -0.53
NIFKP1-201ENST00000398317 PRDM1O75626 825 aa11.71□□□□□ -0.53
NIFKP1-201ENST00000398317 NDUFB10O96000 172 aa11.71□□□□□ -0.53
NIFKP1-201ENST00000398317 APPP05067 770 aa11.71□□□□□ -0.53
NIFKP1-201ENST00000398317 TDO2P48775 406 aa11.71□□□□□ -0.53
NIFKP1-201ENST00000398317 KLRC3Q07444 240 aa11.71□□□□□ -0.53
NIFKP1-201ENST00000398317 ZNF792Q3KQV3 632 aa11.71□□□□□ -0.53
NIFKP1-201ENST00000398317 TRIM60Q495X7 471 aa11.71□□□□□ -0.53
NIFKP1-201ENST00000398317 GIMAP6Q6P9H5 292 aa11.71□□□□□ -0.53
NIFKP1-201ENST00000398317 SEC62Q99442 399 aaKnown RBP11.71□□□□□ -0.53
NIFKP1-201ENST00000398317 SLF1Q9BQI6 1058 aa11.71□□□□□ -0.53
NIFKP1-201ENST00000398317 TINF2Q9BSI4 451 aa11.71□□□□□ -0.53
NIFKP1-201ENST00000398317 PRDM5Q9NQX1 630 aaPredicted RBP11.71□□□□□ -0.53
NIFKP1-201ENST00000398317 NYAP2Q9P242 653 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms