RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 TTC39AQ5SRH9 613 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 ITPRIPQ8IWB1 547 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 SPATA5Q8NB90 893 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 SGSM3Q96HU1 749 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 C12orf42Q96LP6 360 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 DEPDC7Q96QD5 511 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 MEIS3Q99687 375 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 SEZ6LQ9BYH1 1024 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 LRRCC1Q9C099 1032 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 ATP8A2Q9NTI2 1148 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 ZNF70Q9UC06 446 aaPredicted RBP4.51□□□□□ -1.69
UBE3A-202ENST00000397954 STAP2Q9UGK3 403 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 CHMP3Q9Y3E7 222 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 SENP3-EIF4A1A0A087X0R7 540 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 ESYT3A0FGR9 886 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 C19orf81C9J6K1 198 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 CDC45O75419 566 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 PDGFAP04085 211 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 HLA-DOAP06340 250 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 CETPP11597 493 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 USP14P54578 494 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 CHMP4BP1P59074 171 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 TKFCQ3LXA3 575 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 LBX2Q6XYB7 198 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 ERO1BQ86YB8 467 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 RASAL3Q86YV0 1011 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 PGBD3Q8N328 593 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 LILRB2Q8N423 598 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 SAMD3Q8N6K7 520 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 BAP1Q92560 729 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 XAGE2Q96GT9 111 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 ERO1AQ96HE7 468 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 CCDC17Q96LX7 622 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 WDR18Q9BV38 432 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 RWDD1Q9H446 243 aaPredicted RBP4.51□□□□□ -1.69
UBE3A-202ENST00000397954 DBNDD1Q9H9R9 158 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 ETNK1Q9HBU6 452 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 GGA3Q9NZ52 723 aa4.51□□□□□ -1.69
UBE3A-202ENST00000397954 BCCIPQ9P287 314 aaKnown RBP eCLIP4.51□□□□□ -1.69
UBE3A-202ENST00000397954 MYO5AQ9Y4I1 1855 aaKnown RBP4.51□□□□□ -1.69
UBE3A-202ENST00000397954 FRMPD3Q5JV73 1810 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 GABBR2O75899 941 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 GLRX3O76003 335 aaKnown RBP4.5□□□□□ -1.69
UBE3A-202ENST00000397954 EPS15P42566 896 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 C8orf34Q49A92 452 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 SBK1Q52WX2 424 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 TTC6Q86TZ1 520 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 DZIP1Q86YF9 867 aaKnown RBP4.5□□□□□ -1.69
UBE3A-202ENST00000397954 FBF1Q8TES7 1133 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 HAUS7Q99871 368 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 TRIM55Q9BYV6 548 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 C12orf49Q9H741 205 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 NRBP1Q9UHY1 535 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 EFR3BQ9Y2G0 817 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 CSADQ9Y600 493 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 FAM155AB1AL88 458 aaPredicted RBP4.5□□□□□ -1.69
UBE3A-202ENST00000397954 KLF4O43474 513 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 GCLCP48506 637 aaPredicted RBP4.5□□□□□ -1.69
UBE3A-202ENST00000397954 CLCN6P51797 869 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 GYS2P54840 703 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 ERMP1Q7Z2K6 904 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 SLC9A9Q8IVB4 645 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.5□□□□□ -1.69
UBE3A-202ENST00000397954 RHPN1Q8TCX5 695 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 KLK14Q9P0G3 267 aa4.5□□□□□ -1.69
UBE3A-202ENST00000397954 ARPP21Q9UBL0 812 aaPredicted RBP4.5□□□□□ -1.69
UBE3A-202ENST00000397954 MYH4Q9Y623 1939 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 PLA2G6O60733 806 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 RAD17O75943 681 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 CELF2O95319 508 aaKnown RBP4.49□□□□□ -1.69
UBE3A-202ENST00000397954 MYCP01106 439 aaPredicted RBP4.49□□□□□ -1.69
UBE3A-202ENST00000397954 SLC3A2P08195 630 aaKnown RBP4.49□□□□□ -1.69
UBE3A-202ENST00000397954 ZAP70P43403 619 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 TRAF1Q13077 416 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 SNAPC2Q13487 334 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 RAB33AQ14088 237 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 ALX1Q15699 326 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 CELF2-AS1Q8N7Q2 184 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 TRPM4Q8TD43 1214 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 EMID1Q96A84 441 aaPredicted RBP4.49□□□□□ -1.69
UBE3A-202ENST00000397954 NSUN4Q96CB9 384 aaKnown RBP4.49□□□□□ -1.69
UBE3A-202ENST00000397954 WNK4Q96J92 1243 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 CAPNS2Q96L46 248 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 DNAJC7Q99615 494 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 TRIM56Q9BRZ2 755 aaKnown RBP4.49□□□□□ -1.69
UBE3A-202ENST00000397954 CRNKL1Q9BZJ0 848 aaKnown RBP4.49□□□□□ -1.69
UBE3A-202ENST00000397954 ADAMTS1Q9UHI8 967 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 CREB3O43889 395 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 FRAT2O75474 233 aaPredicted RBP4.49□□□□□ -1.69
UBE3A-202ENST00000397954 IFIT2P09913 472 aaKnown RBP4.49□□□□□ -1.69
UBE3A-202ENST00000397954 USP17L7P0C7H9 530 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 HOXD10P28358 340 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 MMP16P51512 607 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 HIRAP54198 1017 aaPredicted RBP4.49□□□□□ -1.69
UBE3A-202ENST00000397954 OS9Q13438 667 aaPredicted RBP4.49□□□□□ -1.69
UBE3A-202ENST00000397954 TAF1CQ15572 869 aaPredicted RBP4.49□□□□□ -1.69
UBE3A-202ENST00000397954 ANGEL2Q5VTE6 544 aaKnown RBP4.49□□□□□ -1.69
UBE3A-202ENST00000397954 SMC5Q8IY18 1101 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 SCYL3Q8IZE3 742 aa4.49□□□□□ -1.69
UBE3A-202ENST00000397954 MB21D1Q8N884 522 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms