RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 CPXCR1Q8N123 301 aa19.29■□□□□ 0.68
CUX2-202ENST00000397643 STRBPQ96SI9 672 aaKnown RBP19.29■□□□□ 0.68
CUX2-202ENST00000397643 PPP1R12CQ9BZL4 782 aa19.29■□□□□ 0.68
CUX2-202ENST00000397643 ABHD16BQ9H3Z7 469 aa19.29■□□□□ 0.68
CUX2-202ENST00000397643 RAVER2Q9HCJ3 691 aaKnown RBP19.29■□□□□ 0.68
CUX2-202ENST00000397643 ZBTB40Q9NUA8 1239 aa19.29■□□□□ 0.68
CUX2-202ENST00000397643 MYH4Q9Y623 1939 aa19.29■□□□□ 0.68
CUX2-202ENST00000397643 GSG1L2A8MUP6 293 aa19.28■□□□□ 0.68
CUX2-202ENST00000397643 HMMRO75330 724 aa19.28■□□□□ 0.68
CUX2-202ENST00000397643 CCDC174Q6PII3 467 aa19.28■□□□□ 0.68
CUX2-202ENST00000397643 TMEM199Q8N511 208 aa19.28■□□□□ 0.68
CUX2-202ENST00000397643 ATXN2LQ8WWM7 1075 aaKnown RBP19.28■□□□□ 0.68
CUX2-202ENST00000397643 GAS2L1Q99501 681 aaPredicted RBP19.28■□□□□ 0.68
CUX2-202ENST00000397643 LRRC37A2A6NM11 1700 aa19.28■□□□□ 0.68
CUX2-202ENST00000397643 ASTN1O14525 1302 aa19.27■□□□□ 0.68
CUX2-202ENST00000397643 GBF1Q92538 1859 aa19.27■□□□□ 0.68
CUX2-202ENST00000397643 COL9A1P20849 921 aa19.27■□□□□ 0.68
CUX2-202ENST00000397643 GNASQ5JWF2 1037 aa19.27■□□□□ 0.68
CUX2-202ENST00000397643 CCDC129Q6ZRS4 1044 aa19.27■□□□□ 0.68
CUX2-202ENST00000397643 CCDC144CPQ8IYA2 1237 aa19.27■□□□□ 0.68
CUX2-202ENST00000397643 STK11IPQ8N1F8 1099 aa19.27■□□□□ 0.68
CUX2-202ENST00000397643 PPM1EQ8WY54 764 aa19.27■□□□□ 0.68
CUX2-202ENST00000397643 KIFC2Q96AC6 838 aa19.27■□□□□ 0.68
CUX2-202ENST00000397643 SPC25Q9HBM1 224 aa19.27■□□□□ 0.68
CUX2-202ENST00000397643 EPB41L4AQ9HCS5 686 aaPredicted RBP19.27■□□□□ 0.68
CUX2-202ENST00000397643 CXXC1Q9P0U4 656 aaPredicted RBP19.27■□□□□ 0.68
CUX2-202ENST00000397643 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.26■□□□□ 0.67
CUX2-202ENST00000397643 ZBED4O75132 1171 aa19.26■□□□□ 0.67
CUX2-202ENST00000397643 CYP2C18P33260 490 aa19.26■□□□□ 0.67
CUX2-202ENST00000397643 SLC4A3P48751 1232 aa19.26■□□□□ 0.67
CUX2-202ENST00000397643 ZSCAN25Q6NSZ9 544 aa19.26■□□□□ 0.67
CUX2-202ENST00000397643 ANKRD35Q8N283 1001 aa19.26■□□□□ 0.67
CUX2-202ENST00000397643 SLC43A3Q8NBI5 491 aa19.26■□□□□ 0.67
CUX2-202ENST00000397643 CHST13Q8NET6 341 aa19.26■□□□□ 0.67
CUX2-202ENST00000397643 HERVK_113Q902F9 699 aa19.26■□□□□ 0.67
CUX2-202ENST00000397643 MKL1Q969V6 931 aa19.26■□□□□ 0.67
CUX2-202ENST00000397643 ASB2Q96Q27 587 aa19.26■□□□□ 0.67
CUX2-202ENST00000397643 IL23AQ9NPF7 189 aa19.26■□□□□ 0.67
CUX2-202ENST00000397643 THEGQ9P2T0 379 aa19.26■□□□□ 0.67
CUX2-202ENST00000397643 UMODL1Q5DID0 1318 aa19.25■□□□□ 0.67
CUX2-202ENST00000397643 OAZ1P54368 228 aa19.25■□□□□ 0.67
CUX2-202ENST00000397643 BEX3Q00994 111 aa19.25■□□□□ 0.67
CUX2-202ENST00000397643 CNTN2Q02246 1040 aa19.25■□□□□ 0.67
CUX2-202ENST00000397643 GIMAP6Q6P9H5 292 aa19.25■□□□□ 0.67
CUX2-202ENST00000397643 FAM133AQ8N9E0 248 aa19.25■□□□□ 0.67
CUX2-202ENST00000397643 VTI1AQ96AJ9 217 aa19.25■□□□□ 0.67
CUX2-202ENST00000397643 CEP95Q96GE4 821 aa19.25■□□□□ 0.67
CUX2-202ENST00000397643 MKNK2Q9HBH9 465 aa19.25■□□□□ 0.67
CUX2-202ENST00000397643 CLIP2Q9UDT6 1046 aa19.25■□□□□ 0.67
CUX2-202ENST00000397643 FBXO40Q9UH90 709 aa19.25■□□□□ 0.67
CUX2-202ENST00000397643 REV3LO60673 3130 aa19.25■□□□□ 0.67
CUX2-202ENST00000397643 XIRP2A4UGR9 3374 aa19.24■□□□□ 0.67
CUX2-202ENST00000397643 TLR3O15455 904 aaKnown RBP19.24■□□□□ 0.67
CUX2-202ENST00000397643 PTGS1P23219 599 aa19.24■□□□□ 0.67
CUX2-202ENST00000397643 RAB30Q15771 203 aa19.24■□□□□ 0.67
CUX2-202ENST00000397643 LRRC47Q8N1G4 583 aaKnown RBP19.24■□□□□ 0.67
CUX2-202ENST00000397643 GMCL1P1Q8NEA9 526 aa19.24■□□□□ 0.67
CUX2-202ENST00000397643 OSBP2Q969R2 916 aa19.24■□□□□ 0.67
CUX2-202ENST00000397643 MTMR4Q9NYA4 1195 aa19.24■□□□□ 0.67
CUX2-202ENST00000397643 RAPGEFL1Q9UHV5 662 aa19.24■□□□□ 0.67
CUX2-202ENST00000397643 FEM1BQ9UK73 627 aa19.24■□□□□ 0.67
CUX2-202ENST00000397643 DDX19BQ9UMR2 479 aa19.24■□□□□ 0.67
CUX2-202ENST00000397643 SYNPO2Q9UMS6 1093 aa19.24■□□□□ 0.67
CUX2-202ENST00000397643 GNEQ9Y223 722 aaKnown RBP19.24■□□□□ 0.67
CUX2-202ENST00000397643 YBX2Q9Y2T7 364 aaKnown RBP19.24■□□□□ 0.67
CUX2-202ENST00000397643 COG6Q9Y2V7 657 aa19.24■□□□□ 0.67
CUX2-202ENST00000397643 GRIN2DO15399 1336 aa19.24■□□□□ 0.67
CUX2-202ENST00000397643 PLIN4Q96Q06 1357 aa19.23■□□□□ 0.67
CUX2-202ENST00000397643 MINDY4BA8MYZ0 360 aa19.23■□□□□ 0.67
CUX2-202ENST00000397643 CXCL17Q6UXB2 119 aa19.23■□□□□ 0.67
CUX2-202ENST00000397643 ADAMTS19Q8TE59 1207 aa19.23■□□□□ 0.67
CUX2-202ENST00000397643 VWCEQ96DN2 955 aa19.23■□□□□ 0.67
CUX2-202ENST00000397643 NKX2-4Q9H2Z4 354 aa19.23■□□□□ 0.67
CUX2-202ENST00000397643 ZNF536O15090 1300 aa19.23■□□□□ 0.67
CUX2-202ENST00000397643 SOWAHBA6NEL2 793 aa19.22■□□□□ 0.67
CUX2-202ENST00000397643 PRDM1O75626 825 aa19.22■□□□□ 0.67
CUX2-202ENST00000397643 HIPK3Q9H422 1215 aa19.22■□□□□ 0.67
CUX2-202ENST00000397643 A1CFQ9NQ94 594 aaKnown RBP19.22■□□□□ 0.67
CUX2-202ENST00000397643 HOMER2Q9NSB8 354 aa19.22■□□□□ 0.67
CUX2-202ENST00000397643 MSRAQ9UJ68 235 aa19.22■□□□□ 0.67
CUX2-202ENST00000397643 SMARCA5O60264 1052 aaPredicted RBP19.21■□□□□ 0.67
CUX2-202ENST00000397643 MRPS5P82675 430 aaKnown RBP19.21■□□□□ 0.67
CUX2-202ENST00000397643 TNFAIP2Q03169 654 aa19.21■□□□□ 0.67
CUX2-202ENST00000397643 CCDC85BQ15834 202 aaPredicted RBP19.21■□□□□ 0.67
CUX2-202ENST00000397643 KBTBD3Q8NAB2 608 aa19.21■□□□□ 0.67
CUX2-202ENST00000397643 APPBP2Q92624 585 aa19.21■□□□□ 0.67
CUX2-202ENST00000397643 NOC4LQ9BVI4 516 aaKnown RBP19.21■□□□□ 0.67
CUX2-202ENST00000397643 WNT8AQ9H1J5 351 aa19.21■□□□□ 0.67
CUX2-202ENST00000397643 ACAD9Q9H845 621 aa19.21■□□□□ 0.67
CUX2-202ENST00000397643 CTDP1Q9Y5B0 961 aaPredicted RBP19.21■□□□□ 0.67
CUX2-202ENST00000397643 DDX49Q9Y6V7 483 aaKnown RBP19.21■□□□□ 0.67
CUX2-202ENST00000397643 LCTP09848 1927 aa19.21■□□□□ 0.67
CUX2-202ENST00000397643 GPAA1O43292 621 aa19.2■□□□□ 0.66
CUX2-202ENST00000397643 TTLL1O95922 423 aa19.2■□□□□ 0.66
CUX2-202ENST00000397643 MS4A1P11836 297 aa19.2■□□□□ 0.66
CUX2-202ENST00000397643 BMP3P12645 472 aa19.2■□□□□ 0.66
CUX2-202ENST00000397643 SLFN13Q68D06 897 aa19.2■□□□□ 0.66
CUX2-202ENST00000397643 OTOP2Q7RTS6 562 aa19.2■□□□□ 0.66
CUX2-202ENST00000397643 TLK2Q86UE8 772 aa19.2■□□□□ 0.66
CUX2-202ENST00000397643 UHRF1Q96T88 793 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms