RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 EIF3CQ99613 913 aaKnown RBP6.07□□□□□ -1.44
PTPRD-205ENST00000397611 A0A1W2PQJ5 194 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 TACC1O75410 805 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 IDEP14735 1019 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 KRT2P35908 639 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 PPARAQ07869 468 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 GOLGA8FQ08AF8 430 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 GOLGA8DPQ0D2H9 430 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 SND1Q7KZF4 910 aaKnown RBP eCLIP6.07□□□□□ -1.44
PTPRD-205ENST00000397611 DPF2Q92785 391 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 GREM2Q9H772 168 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 SSU72P8A0A1W2PR75 194 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 BRD2P25440 801 aaKnown RBP6.06□□□□□ -1.44
PTPRD-205ENST00000397611 AMPD3Q01432 767 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 PDE4BQ07343 736 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 SEPT2Q15019 361 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 NPY5RQ15761 445 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 CCDC122Q5T0U0 273 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 ZNF594Q96JF6 807 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-205ENST00000397611 TRIM47Q96LD4 638 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 JPH2Q9BR39 696 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-205ENST00000397611 PARD6BQ9BYG5 372 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 SAMD15Q9P1V8 674 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 CEP83Q9Y592 693 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 EPN1Q9Y6I3 576 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-205ENST00000397611 NDUFB9Q9Y6M9 179 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 POLR2DO15514 142 aaKnown RBP6.06□□□□□ -1.44
PTPRD-205ENST00000397611 SCG2P13521 617 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 EVA1CP58658 441 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 EFCAB13Q8IY85 973 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 CCDC85AQ96PX6 553 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-205ENST00000397611 STK17AQ9UEE5 414 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 PAK1Q13153 545 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 ZSCAN29Q8IWY8 852 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-205ENST00000397611 GIMAP8Q8ND71 665 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-205ENST00000397611 PIGBQ92521 554 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 NAP1L4Q99733 375 aaKnown RBP6.06□□□□□ -1.44
PTPRD-205ENST00000397611 RAB34Q9BZG1 259 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 ANKRD2Q9GZV1 360 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 SLAIN2Q9P270 581 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 THRAP3Q9Y2W1 955 aaKnown RBP6.06□□□□□ -1.44
PTPRD-205ENST00000397611 DAAM1Q9Y4D1 1078 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 LMNB2Q03252 620 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 EMC10Q5UCC4 262 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 DHX58Q96C10 678 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 BAIAP2L1Q9UHR4 511 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 LAMB4A4D0S4 1761 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 PPFIA4O75335 1185 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 UBA7P41226 1012 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 ZNF658Q5TYW1 1059 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-205ENST00000397611 ZNF572Q7Z3I7 529 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-205ENST00000397611 WDR24Q96S15 920 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 SPZ1Q9BXG8 430 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 GSTTP1A0A1W2PQM5 241 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 CCDC160A6NGH7 325 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 E7EVH7 732 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 UBXN1Q04323 297 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 CHRNA2Q15822 529 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 C15orf52Q6ZUT6 534 aaKnown RBP6.06□□□□□ -1.44
PTPRD-205ENST00000397611 CYB5R4Q7L1T6 521 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 CHST3Q7LGC8 479 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 KRT25Q7Z3Z0 450 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 ARFGAP2Q8N6H7 521 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 PAIP2Q9BPZ3 127 aaKnown RBP6.06□□□□□ -1.44
PTPRD-205ENST00000397611 TACO1Q9BSH4 297 aaKnown RBP6.06□□□□□ -1.44
PTPRD-205ENST00000397611 MYO3BQ8WXR4 1341 aa6.06□□□□□ -1.44
PTPRD-205ENST00000397611 PCK1P35558 622 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 COPB1P53618 953 aaKnown RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 ADKP55263 362 aaKnown RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 PPP4CP60510 307 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 PTPN21Q16825 1174 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 CCDC50Q8IVM0 306 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 GUF1Q8N442 669 aaKnown RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 ZSCAN10Q96SZ4 725 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 VAV2P52735 878 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 PNOCQ13519 176 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 PFKFB3Q16875 520 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 TRIM58Q8NG06 486 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 SLC24A3Q9HC58 644 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 SAMM50Q9Y512 469 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 GNA11P29992 359 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 NOP2P46087 812 aaKnown RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 LACTBP83111 547 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 ATP2B2Q01814 1243 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 WWC2Q6AWC2 1192 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 RAD9BQ6WBX8 426 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 BCAS4Q8TDM0 211 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 UBLCP1Q8WVY7 318 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 CCDC43Q96MW1 224 aaKnown RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 CAPS2Q9BXY5 557 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 CRNKL1Q9BZJ0 848 aaKnown RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 CCDC87Q9NVE4 849 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 LRP2BPQ9P2M1 347 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 TCEAL9Q9UHQ7 104 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 ZBTB1Q9Y2K1 713 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 ROBO3Q96MS0 1386 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 PPFIA1Q13136 1202 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 MICAL1Q8TDZ2 1067 aa6.05□□□□□ -1.44
PTPRD-205ENST00000397611 SYN2Q92777 582 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-205ENST00000397611 VEZTQ9HBM0 779 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms