RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 PRR12Q9ULL5 1215 aa16.37■□□□□ 0.21
SEC13-204ENST00000397099 ZMYND8Q9ULU4 1186 aaPredicted RBP16.37■□□□□ 0.21
SEC13-204ENST00000397099 CNPY2Q9Y2B0 182 aa16.37■□□□□ 0.21
SEC13-204ENST00000397099 NEDD4P46934 1319 aa16.37■□□□□ 0.21
SEC13-204ENST00000397099 SGSM2O43147 1006 aa16.36■□□□□ 0.21
SEC13-204ENST00000397099 KDM4AO75164 1064 aa16.36■□□□□ 0.21
SEC13-204ENST00000397099 SNHG28P0DPA3 235 aa16.36■□□□□ 0.21
SEC13-204ENST00000397099 PDHBP11177 359 aa16.36■□□□□ 0.21
SEC13-204ENST00000397099 MAMDC4Q6UXC1 1216 aa16.36■□□□□ 0.21
SEC13-204ENST00000397099 ZSCAN10Q96SZ4 725 aaPredicted RBP16.36■□□□□ 0.21
SEC13-204ENST00000397099 UBAC1Q9BSL1 405 aa16.36■□□□□ 0.21
SEC13-204ENST00000397099 MAF1Q9H063 256 aa16.36■□□□□ 0.21
SEC13-204ENST00000397099 RANBP17Q9H2T7 1088 aaKnown RBP16.36■□□□□ 0.21
SEC13-204ENST00000397099 KAT14Q9H8E8 782 aa16.36■□□□□ 0.21
SEC13-204ENST00000397099 RIPK3Q9Y572 518 aa16.36■□□□□ 0.21
SEC13-204ENST00000397099 DNM1LO00429 736 aa16.35■□□□□ 0.21
SEC13-204ENST00000397099 MYCNP04198 464 aaPredicted RBP16.35■□□□□ 0.21
SEC13-204ENST00000397099 ICAM1P05362 532 aa16.35■□□□□ 0.21
SEC13-204ENST00000397099 SYN1P17600 705 aa16.35■□□□□ 0.21
SEC13-204ENST00000397099 SYDE2Q5VT97 1194 aa16.35■□□□□ 0.21
SEC13-204ENST00000397099 KIAA1211Q6ZU35 1233 aa16.35■□□□□ 0.21
SEC13-204ENST00000397099 LOC102724159A0A0B4J2E5 919 aa16.34■□□□□ 0.21
SEC13-204ENST00000397099 B4E1Z4 1266 aa16.34■□□□□ 0.21
SEC13-204ENST00000397099 PGK2P07205 417 aa16.34■□□□□ 0.21
SEC13-204ENST00000397099 COL6A1P12109 1028 aa16.34■□□□□ 0.21
SEC13-204ENST00000397099 SLC4A3P48751 1232 aa16.34■□□□□ 0.21
SEC13-204ENST00000397099 ZNF543Q08ER8 600 aa16.34■□□□□ 0.21
SEC13-204ENST00000397099 SART3Q15020 963 aaKnown RBP16.34■□□□□ 0.21
SEC13-204ENST00000397099 PWP2Q15269 919 aaKnown RBP16.34■□□□□ 0.21
SEC13-204ENST00000397099 BMP2KLQ5H9B9 411 aa16.34■□□□□ 0.21
SEC13-204ENST00000397099 PNMA1Q8ND90 353 aa16.34■□□□□ 0.21
SEC13-204ENST00000397099 TRPV1Q8NER1 839 aa16.34■□□□□ 0.21
SEC13-204ENST00000397099 TRERF1Q96PN7 1200 aa16.34■□□□□ 0.21
SEC13-204ENST00000397099 RNF146Q9NTX7 359 aa16.34■□□□□ 0.21
SEC13-204ENST00000397099 ZSWIM5Q9P217 1185 aa16.34■□□□□ 0.21
SEC13-204ENST00000397099 ZNF536O15090 1300 aa16.34■□□□□ 0.21
SEC13-204ENST00000397099 ERICH2A1L162 156 aa16.33■□□□□ 0.2
SEC13-204ENST00000397099 POTEB2H3BUK9 544 aa16.33■□□□□ 0.2
SEC13-204ENST00000397099 RARBP10826 455 aa16.33■□□□□ 0.2
SEC13-204ENST00000397099 AKR1A1P14550 325 aa16.33■□□□□ 0.2
SEC13-204ENST00000397099 ASPRV1Q53RT3 343 aa16.33■□□□□ 0.2
SEC13-204ENST00000397099 ANO1Q5XXA6 986 aa16.33■□□□□ 0.2
SEC13-204ENST00000397099 CASC1Q6TDU7 716 aa16.33■□□□□ 0.2
SEC13-204ENST00000397099 RALYLQ86SE5 291 aaKnown RBP16.33■□□□□ 0.2
SEC13-204ENST00000397099 MAP4K1Q92918 833 aa16.33■□□□□ 0.2
SEC13-204ENST00000397099 SENP6Q9GZR1 1112 aaPredicted RBP16.33■□□□□ 0.2
SEC13-204ENST00000397099 PRO3102Q9H379 93 aa16.33■□□□□ 0.2
SEC13-204ENST00000397099 CCPG1Q9ULG6 757 aa16.33■□□□□ 0.2
SEC13-204ENST00000397099 MTMR7Q9Y216 660 aa16.33■□□□□ 0.2
SEC13-204ENST00000397099 RANBP2P49792 3224 aaKnown RBP16.33■□□□□ 0.2
SEC13-204ENST00000397099 ALPK3Q96L96 1907 aa16.33■□□□□ 0.2
SEC13-204ENST00000397099 ASB14A6NK59 587 aa16.32■□□□□ 0.2
SEC13-204ENST00000397099 KBTBD13C9JR72 458 aa16.32■□□□□ 0.2
SEC13-204ENST00000397099 TNKSO95271 1327 aa16.32■□□□□ 0.2
SEC13-204ENST00000397099 NEFLP07196 543 aa16.32■□□□□ 0.2
SEC13-204ENST00000397099 ALAS1P13196 640 aa16.32■□□□□ 0.2
SEC13-204ENST00000397099 LRRC26Q2I0M4 334 aa16.32■□□□□ 0.2
SEC13-204ENST00000397099 PRAMEF19Q5SWL8 479 aa16.32■□□□□ 0.2
SEC13-204ENST00000397099 IFIT1BQ5T764 474 aaKnown RBP16.32■□□□□ 0.2
SEC13-204ENST00000397099 ENAHQ8N8S7 591 aaPredicted RBP16.32■□□□□ 0.2
SEC13-204ENST00000397099 WDR19Q8NEZ3 1342 aa16.32■□□□□ 0.2
SEC13-204ENST00000397099 AGBL1Q96MI9 1066 aa16.32■□□□□ 0.2
SEC13-204ENST00000397099 ABHD16BQ9H3Z7 469 aa16.32■□□□□ 0.2
SEC13-204ENST00000397099 SMCHD1A6NHR9 2005 aa16.31■□□□□ 0.2
SEC13-204ENST00000397099 A0A1W2PPC1 479 aa16.31■□□□□ 0.2
SEC13-204ENST00000397099 CYP21A2P08686 494 aa16.31■□□□□ 0.2
SEC13-204ENST00000397099 GJC2Q5T442 439 aaPredicted RBP16.31■□□□□ 0.2
SEC13-204ENST00000397099 CCDC174Q6PII3 467 aa16.31■□□□□ 0.2
SEC13-204ENST00000397099 RNF180Q86T96 592 aa16.31■□□□□ 0.2
SEC13-204ENST00000397099 NCOA7Q8NI08 942 aa16.31■□□□□ 0.2
SEC13-204ENST00000397099 CCDC136Q96JN2 1154 aa16.31■□□□□ 0.2
SEC13-204ENST00000397099 MPHOSPH6Q99547 160 aaKnown RBP16.31■□□□□ 0.2
SEC13-204ENST00000397099 ZKSCAN3Q9BRR0 538 aa16.31■□□□□ 0.2
SEC13-204ENST00000397099 MTA3Q9BTC8 594 aa16.31■□□□□ 0.2
SEC13-204ENST00000397099 IL25Q9H293 177 aa16.31■□□□□ 0.2
SEC13-204ENST00000397099 GPCPD1Q9NPB8 672 aa16.31■□□□□ 0.2
SEC13-204ENST00000397099 A1CFQ9NQ94 594 aaKnown RBP16.31■□□□□ 0.2
SEC13-204ENST00000397099 HOMER2Q9NSB8 354 aa16.31■□□□□ 0.2
SEC13-204ENST00000397099 ADD3Q9UEY8 706 aaKnown RBP16.31■□□□□ 0.2
SEC13-204ENST00000397099 FAM184BQ9ULE4 1060 aa16.31■□□□□ 0.2
SEC13-204ENST00000397099 TRIOBPQ9H2D6 2365 aa16.3■□□□□ 0.2
SEC13-204ENST00000397099 FRMPD2Q68DX3 1309 aaPredicted RBP16.3■□□□□ 0.2
SEC13-204ENST00000397099 SLC16A2P36021 539 aa16.3■□□□□ 0.2
SEC13-204ENST00000397099 MAGEA10P43363 369 aaPredicted RBP16.3■□□□□ 0.2
SEC13-204ENST00000397099 ATN1P54259 1190 aaPredicted RBP16.3■□□□□ 0.2
SEC13-204ENST00000397099 PTH1RQ03431 593 aa16.3■□□□□ 0.2
SEC13-204ENST00000397099 TRAF1Q13077 416 aa16.3■□□□□ 0.2
SEC13-204ENST00000397099 TTBK2Q6IQ55 1244 aa16.3■□□□□ 0.2
SEC13-204ENST00000397099 FAM133AQ8N9E0 248 aa16.3■□□□□ 0.2
SEC13-204ENST00000397099 CHMP4CQ96CF2 233 aa16.3■□□□□ 0.2
SEC13-204ENST00000397099 CYP39A1Q9NYL5 469 aa16.3■□□□□ 0.2
SEC13-204ENST00000397099 B4DLN1 442 aa16.29■□□□□ 0.2
SEC13-204ENST00000397099 PARP1P09874 1014 aaKnown RBP16.29■□□□□ 0.2
SEC13-204ENST00000397099 ZNF865P0CJ78 1059 aaPredicted RBP16.29■□□□□ 0.2
SEC13-204ENST00000397099 MRPL12P52815 198 aaKnown RBP16.29■□□□□ 0.2
SEC13-204ENST00000397099 ACVR2BQ13705 512 aa16.29■□□□□ 0.2
SEC13-204ENST00000397099 RGS22Q8NE09 1264 aa16.29■□□□□ 0.2
SEC13-204ENST00000397099 GDF15Q99988 308 aa16.29■□□□□ 0.2
SEC13-204ENST00000397099 ESYT1Q9BSJ8 1104 aa16.29■□□□□ 0.2
SEC13-204ENST00000397099 TSEN34Q9BSV6 310 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms