RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 SYNRGQ9UMZ2 1314 aa17.09■□□□□ 0.33
MCF2L-205ENST00000397017 MATR3P43243 847 aaKnown RBP eCLIP17.09■□□□□ 0.33
MCF2L-205ENST00000397017 HERC4Q5GLZ8 1057 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-205ENST00000397017 ERMNQ8TAM6 284 aa17.09■□□□□ 0.33
MCF2L-205ENST00000397017 TSC1Q92574 1164 aa17.09■□□□□ 0.33
MCF2L-205ENST00000397017 AMNQ9BXJ7 453 aa17.09■□□□□ 0.33
MCF2L-205ENST00000397017 TDP2O95551 362 aa17.09■□□□□ 0.33
MCF2L-205ENST00000397017 PPP4CP60510 307 aa17.09■□□□□ 0.33
MCF2L-205ENST00000397017 TDRD12Q587J7 1177 aaKnown RBP17.09■□□□□ 0.33
MCF2L-205ENST00000397017 FKBP15Q5T1M5 1219 aa17.09■□□□□ 0.33
MCF2L-205ENST00000397017 FOXP4Q8IVH2 680 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-205ENST00000397017 TPH2Q8IWU9 490 aa17.09■□□□□ 0.33
MCF2L-205ENST00000397017 TSG101Q99816 390 aa17.09■□□□□ 0.33
MCF2L-205ENST00000397017 ANAPC4Q9UJX5 808 aa17.09■□□□□ 0.33
MCF2L-205ENST00000397017 C16orf86Q6ZW13 317 aa17.08■□□□□ 0.33
MCF2L-205ENST00000397017 SYCP3Q8IZU3 236 aa17.08■□□□□ 0.33
MCF2L-205ENST00000397017 GOPCQ9HD26 462 aa17.08■□□□□ 0.33
MCF2L-205ENST00000397017 SAMSN1Q9NSI8 373 aaKnown RBP17.08■□□□□ 0.33
MCF2L-205ENST00000397017 PYCARDQ9ULZ3 195 aa17.08■□□□□ 0.33
MCF2L-205ENST00000397017 IL1R1P14778 569 aa17.08■□□□□ 0.32
MCF2L-205ENST00000397017 HOXA10P31260 410 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-205ENST00000397017 LRRC41Q15345 812 aa17.08■□□□□ 0.32
MCF2L-205ENST00000397017 GSDMDP57764 484 aa17.08■□□□□ 0.32
MCF2L-205ENST00000397017 CSGALNACT2Q8N6G5 542 aa17.08■□□□□ 0.32
MCF2L-205ENST00000397017 NELFBQ8WX92 580 aa17.08■□□□□ 0.32
MCF2L-205ENST00000397017 PAGR1Q9BTK6 254 aa17.08■□□□□ 0.32
MCF2L-205ENST00000397017 CNTNAP5Q8WYK1 1306 aa17.08■□□□□ 0.32
MCF2L-205ENST00000397017 STK36Q9NRP7 1315 aa17.08■□□□□ 0.32
MCF2L-205ENST00000397017 U2AF2P26368 475 aaKnown RBP eCLIP17.07■□□□□ 0.322e-7■■□□□ 11.9
MCF2L-205ENST00000397017 QRICH1Q2TAL8 776 aa17.07■□□□□ 0.32
MCF2L-205ENST00000397017 MLKLQ8NB16 471 aa17.07■□□□□ 0.32
MCF2L-205ENST00000397017 PYM1Q9BRP8 204 aaKnown RBP17.07■□□□□ 0.32
MCF2L-205ENST00000397017 MAN1B1Q9UKM7 699 aa17.07■□□□□ 0.32
MCF2L-205ENST00000397017 FZD1Q9UP38 647 aa17.07■□□□□ 0.32
MCF2L-205ENST00000397017 TRAF5O00463 557 aa17.07■□□□□ 0.32
MCF2L-205ENST00000397017 RASA3Q14644 834 aa17.07■□□□□ 0.32
MCF2L-205ENST00000397017 KIAA1328Q86T90 577 aa17.07■□□□□ 0.32
MCF2L-205ENST00000397017 SH2D4AQ9H788 454 aa17.07■□□□□ 0.32
MCF2L-205ENST00000397017 PDHBP11177 359 aa17.07■□□□□ 0.32
MCF2L-205ENST00000397017 MKRN3Q13064 507 aaKnown RBP17.07■□□□□ 0.32
MCF2L-205ENST00000397017 TNFAIP1Q13829 316 aa17.07■□□□□ 0.32
MCF2L-205ENST00000397017 LZTFL1Q9NQ48 299 aa17.07■□□□□ 0.32
MCF2L-205ENST00000397017 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.07■□□□□ 0.32
MCF2L-205ENST00000397017 CCPG1Q9ULG6 757 aa17.07■□□□□ 0.32
MCF2L-205ENST00000397017 LRP6O75581 1613 aa17.07■□□□□ 0.32
MCF2L-205ENST00000397017 NBPF9Q3BBW0 867 aa17.06■□□□□ 0.32
MCF2L-205ENST00000397017 CRY2Q49AN0 593 aa17.06■□□□□ 0.32
MCF2L-205ENST00000397017 TMEM179Q6ZVK1 233 aa17.06■□□□□ 0.32
MCF2L-205ENST00000397017 SRRTQ9BXP5 876 aaKnown RBP17.06■□□□□ 0.32
MCF2L-205ENST00000397017 KIAA1024Q9UPX6 916 aa17.06■□□□□ 0.32
MCF2L-205ENST00000397017 GDAQ9Y2T3 454 aa17.06■□□□□ 0.32
MCF2L-205ENST00000397017 TESPA1A2RU30 521 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-205ENST00000397017 TOB1P50616 345 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-205ENST00000397017 PAK1Q13153 545 aa17.06■□□□□ 0.32
MCF2L-205ENST00000397017 RESP18Q5W5W9 173 aa17.06■□□□□ 0.32
MCF2L-205ENST00000397017 POTEDQ86YR6 584 aa17.06■□□□□ 0.32
MCF2L-205ENST00000397017 ZNF526Q8TF50 670 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-205ENST00000397017 CHURC1Q8WUH1 139 aa17.06■□□□□ 0.32
MCF2L-205ENST00000397017 EHMT1Q9H9B1 1298 aa17.06■□□□□ 0.32
MCF2L-205ENST00000397017 BARHL2Q9NY43 387 aa17.06■□□□□ 0.32
MCF2L-205ENST00000397017 ZNRF3Q9ULT6 936 aa17.06■□□□□ 0.32
MCF2L-205ENST00000397017 ECE1P42892 770 aa17.06■□□□□ 0.32
MCF2L-205ENST00000397017 CUL4BQ13620 913 aa17.06■□□□□ 0.32
MCF2L-205ENST00000397017 PHF20Q9BVI0 1012 aa17.06■□□□□ 0.32
MCF2L-205ENST00000397017 DNAI1Q9UI46 699 aa17.06■□□□□ 0.32
MCF2L-205ENST00000397017 PLCG1P19174 1290 aa17.05■□□□□ 0.32
MCF2L-205ENST00000397017 STAT2P52630 851 aa17.05■□□□□ 0.32
MCF2L-205ENST00000397017 GNG11P61952 73 aa17.05■□□□□ 0.32
MCF2L-205ENST00000397017 PABPC4Q13310 644 aaKnown RBP eCLIP17.05■□□□□ 0.32
MCF2L-205ENST00000397017 SPP2Q13103 211 aa17.05■□□□□ 0.32
MCF2L-205ENST00000397017 SNW1Q13573 536 aaKnown RBP17.05■□□□□ 0.32
MCF2L-205ENST00000397017 AXDND1Q5T1B0 1012 aaPredicted RBP17.05■□□□□ 0.32
MCF2L-205ENST00000397017 IGSF22Q8N9C0 903 aa17.05■□□□□ 0.32
MCF2L-205ENST00000397017 TMEM60Q9H2L4 133 aa17.05■□□□□ 0.32
MCF2L-205ENST00000397017 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.05■□□□□ 0.32
MCF2L-205ENST00000397017 COL18A1P39060 1754 aa17.05■□□□□ 0.32
MCF2L-205ENST00000397017 MARF1Q9Y4F3 1742 aaKnown RBP17.05■□□□□ 0.32
MCF2L-205ENST00000397017 PNMA6FA0A0J9YX94 578 aa17.05■□□□□ 0.32
MCF2L-205ENST00000397017 MCM6Q14566 821 aa17.05■□□□□ 0.32
MCF2L-205ENST00000397017 SYDE2Q5VT97 1194 aa17.05■□□□□ 0.32
MCF2L-205ENST00000397017 PAGE5Q96GU1 130 aa17.05■□□□□ 0.32
MCF2L-205ENST00000397017 MAD2L2Q9UI95 211 aa17.05■□□□□ 0.32
MCF2L-205ENST00000397017 BACH1O14867 736 aa17.04■□□□□ 0.32
MCF2L-205ENST00000397017 SLFN14P0C7P3 912 aa17.04■□□□□ 0.32
MCF2L-205ENST00000397017 USP8P40818 1118 aa17.04■□□□□ 0.32
MCF2L-205ENST00000397017 RHBDL3P58872 404 aa17.04■□□□□ 0.32
MCF2L-205ENST00000397017 PKN1Q16512 942 aa17.04■□□□□ 0.32
MCF2L-205ENST00000397017 APOBEC3HQ6NTF7 200 aaKnown RBP17.04■□□□□ 0.32
MCF2L-205ENST00000397017 MICALL2Q8IY33 904 aa17.04■□□□□ 0.32
MCF2L-205ENST00000397017 CAGE1Q8TC20 777 aa17.04■□□□□ 0.32
MCF2L-205ENST00000397017 ACER1Q8TDN7 264 aa17.04■□□□□ 0.32
MCF2L-205ENST00000397017 RASSF7Q02833 373 aa17.04■□□□□ 0.32
MCF2L-205ENST00000397017 STYK1Q6J9G0 422 aa17.04■□□□□ 0.32
MCF2L-205ENST00000397017 HPS3Q969F9 1004 aa17.04■□□□□ 0.32
MCF2L-205ENST00000397017 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.04■□□□□ 0.32
MCF2L-205ENST00000397017 FBXO28Q9NVF7 368 aa17.04■□□□□ 0.32
MCF2L-205ENST00000397017 FBXO2Q9UK22 296 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-205ENST00000397017 NDUFB10O96000 172 aa17.04■□□□□ 0.32
MCF2L-205ENST00000397017 RPN1P04843 607 aaKnown RBP17.04■□□□□ 0.32
MCF2L-205ENST00000397017 EVCP57679 992 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms