RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 CCDC144BQ3MJ40 725 aa15.81■□□□□ 0.12
RPA3-202ENST00000396682 ARMCX2Q7L311 632 aa15.81■□□□□ 0.12
RPA3-202ENST00000396682 ANKRD35Q8N283 1001 aa15.81■□□□□ 0.12
RPA3-202ENST00000396682 CHST13Q8NET6 341 aa15.81■□□□□ 0.12
RPA3-202ENST00000396682 NUP133Q8WUM0 1156 aa15.81■□□□□ 0.12
RPA3-202ENST00000396682 RNPC3Q96LT9 517 aaKnown RBP15.81■□□□□ 0.12
RPA3-202ENST00000396682 UPF3AQ9H1J1 476 aaKnown RBP15.81■□□□□ 0.12
RPA3-202ENST00000396682 TBX21Q9UL17 535 aa15.81■□□□□ 0.12
RPA3-202ENST00000396682 CTAGE5O15320 804 aa15.8■□□□□ 0.12
RPA3-202ENST00000396682 TSPY3P0CV98 308 aa15.8■□□□□ 0.12
RPA3-202ENST00000396682 TSPY8P0CW00 308 aa15.8■□□□□ 0.12
RPA3-202ENST00000396682 BMP3P12645 472 aa15.8■□□□□ 0.12
RPA3-202ENST00000396682 CDK7P50613 346 aa15.8■□□□□ 0.12
RPA3-202ENST00000396682 TFAP4Q01664 338 aa15.8■□□□□ 0.12
RPA3-202ENST00000396682 CNTN2Q02246 1040 aa15.8■□□□□ 0.12
RPA3-202ENST00000396682 PPARAQ07869 468 aa15.8■□□□□ 0.12
RPA3-202ENST00000396682 ZMYM1Q5SVZ6 1142 aa15.8■□□□□ 0.12
RPA3-202ENST00000396682 CCDC144CPQ8IYA2 1237 aa15.8■□□□□ 0.12
RPA3-202ENST00000396682 MYLIPQ8WY64 445 aa15.8■□□□□ 0.12
RPA3-202ENST00000396682 ABHD16BQ9H3Z7 469 aa15.8■□□□□ 0.12
RPA3-202ENST00000396682 HOMER2Q9NSB8 354 aa15.8■□□□□ 0.12
RPA3-202ENST00000396682 FBXO40Q9UH90 709 aa15.8■□□□□ 0.12
RPA3-202ENST00000396682 CTDP1Q9Y5B0 961 aaPredicted RBP15.8■□□□□ 0.12
RPA3-202ENST00000396682 ELP1O95163 1332 aa15.79■□□□□ 0.12
RPA3-202ENST00000396682 DCDC2CA8MYV0 355 aa15.79■□□□□ 0.12
RPA3-202ENST00000396682 TMEM232C9JQI7 657 aa15.79■□□□□ 0.12
RPA3-202ENST00000396682 ASGR1P07306 291 aa15.79■□□□□ 0.12
RPA3-202ENST00000396682 C6orf222P0C671 652 aaPredicted RBP15.79■□□□□ 0.12
RPA3-202ENST00000396682 GJA9P57773 515 aa15.79■□□□□ 0.12
RPA3-202ENST00000396682 PDE4BQ07343 736 aa15.79■□□□□ 0.12
RPA3-202ENST00000396682 RASGRP2Q7LDG7 609 aa15.79■□□□□ 0.12
RPA3-202ENST00000396682 FAM133AQ8N9E0 248 aa15.79■□□□□ 0.12
RPA3-202ENST00000396682 CHMP4CQ96CF2 233 aa15.79■□□□□ 0.12
RPA3-202ENST00000396682 GMCL1Q96IK5 515 aa15.79■□□□□ 0.12
RPA3-202ENST00000396682 FSD1Q9BTV5 496 aa15.79■□□□□ 0.12
RPA3-202ENST00000396682 NACAP1Q9BZK3 213 aa15.79■□□□□ 0.12
RPA3-202ENST00000396682 NAPBQ9H115 298 aa15.79■□□□□ 0.12
RPA3-202ENST00000396682 INCENPQ9NQS7 918 aa15.79■□□□□ 0.12
RPA3-202ENST00000396682 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.79■□□□□ 0.12
RPA3-202ENST00000396682 LRRC37A2A6NM11 1700 aa15.79■□□□□ 0.12
RPA3-202ENST00000396682 ASTN1O14525 1302 aa15.78■□□□□ 0.12
RPA3-202ENST00000396682 SALL3Q9BXA9 1300 aa15.78■□□□□ 0.12
RPA3-202ENST00000396682 TIMP1P01033 207 aa15.78■□□□□ 0.12
RPA3-202ENST00000396682 STAT2P52630 851 aa15.78■□□□□ 0.12
RPA3-202ENST00000396682 LRRFIP1Q32MZ4 808 aaKnown RBP15.78■□□□□ 0.12
RPA3-202ENST00000396682 CCDC129Q6ZRS4 1044 aa15.78■□□□□ 0.12
RPA3-202ENST00000396682 MAFAQ8NHW3 353 aaPredicted RBP15.78■□□□□ 0.12
RPA3-202ENST00000396682 AGBL1Q96MI9 1066 aa15.78■□□□□ 0.12
RPA3-202ENST00000396682 GLT1D1Q96MS3 346 aa15.78■□□□□ 0.12
RPA3-202ENST00000396682 ACAD9Q9H845 621 aa15.78■□□□□ 0.12
RPA3-202ENST00000396682 A1CFQ9NQ94 594 aaKnown RBP15.78■□□□□ 0.12
RPA3-202ENST00000396682 IL17RBQ9NRM6 502 aa15.78■□□□□ 0.12
RPA3-202ENST00000396682 LCTP09848 1927 aa15.77■□□□□ 0.12
RPA3-202ENST00000396682 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.77■□□□□ 0.12
RPA3-202ENST00000396682 SOWAHBA6NEL2 793 aa15.77■□□□□ 0.12
RPA3-202ENST00000396682 ERC2O15083 957 aa15.77■□□□□ 0.12
RPA3-202ENST00000396682 NMT2O60551 498 aa15.77■□□□□ 0.12
RPA3-202ENST00000396682 FDX1P10109 184 aa15.77■□□□□ 0.12
RPA3-202ENST00000396682 PTGS1P23219 599 aa15.77■□□□□ 0.12
RPA3-202ENST00000396682 MCCP23508 829 aa15.77■□□□□ 0.12
RPA3-202ENST00000396682 NKX3-2P78367 333 aa15.77■□□□□ 0.12
RPA3-202ENST00000396682 C16orf59Q7L2K0 433 aa15.77■□□□□ 0.12
RPA3-202ENST00000396682 PCSK9Q8NBP7 692 aaKnown RBP15.77■□□□□ 0.12
RPA3-202ENST00000396682 STAG1Q8WVM7 1258 aa15.77■□□□□ 0.12
RPA3-202ENST00000396682 RNF146Q9NTX7 359 aa15.77■□□□□ 0.12
RPA3-202ENST00000396682 DDX49Q9Y6V7 483 aaKnown RBP15.77■□□□□ 0.12
RPA3-202ENST00000396682 MROH7Q68CQ1 1323 aa15.76■□□□□ 0.11
RPA3-202ENST00000396682 TMEM265A0A087WTH1 108 aa15.76■□□□□ 0.11
RPA3-202ENST00000396682 ARVCFO00192 962 aa15.76■□□□□ 0.11
RPA3-202ENST00000396682 SLC3A2P08195 630 aaKnown RBP15.76■□□□□ 0.11
RPA3-202ENST00000396682 MX1P20591 662 aa15.76■□□□□ 0.11
RPA3-202ENST00000396682 SLC1A4P43007 532 aa15.76■□□□□ 0.11
RPA3-202ENST00000396682 SNAP25P60880 206 aa15.76■□□□□ 0.11
RPA3-202ENST00000396682 BEX3Q00994 111 aa15.76■□□□□ 0.11
RPA3-202ENST00000396682 CTDSPL2Q05D32 466 aa15.76■□□□□ 0.11
RPA3-202ENST00000396682 GNASQ5JWF2 1037 aa15.76■□□□□ 0.11
RPA3-202ENST00000396682 MFSD5Q6N075 450 aa15.76■□□□□ 0.11
RPA3-202ENST00000396682 KCTD1Q719H9 257 aa15.76■□□□□ 0.11
RPA3-202ENST00000396682 FAM160B2Q86V87 743 aa15.76■□□□□ 0.11
RPA3-202ENST00000396682 FAM126BQ8IXS8 530 aa15.76■□□□□ 0.11
RPA3-202ENST00000396682 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.76■□□□□ 0.117e-6■■□□□ 11.5
RPA3-202ENST00000396682 ISY1Q9ULR0 285 aaKnown RBP15.76■□□□□ 0.11
RPA3-202ENST00000396682 STX8Q9UNK0 236 aa15.76■□□□□ 0.11
RPA3-202ENST00000396682 TTC28Q96AY4 2481 aa15.76■□□□□ 0.11
RPA3-202ENST00000396682 A0A0U1RQG5 324 aaPredicted RBP15.75■□□□□ 0.11
RPA3-202ENST00000396682 PLA2G6O60733 806 aa15.75■□□□□ 0.11
RPA3-202ENST00000396682 FOSL2P15408 326 aa15.75■□□□□ 0.11
RPA3-202ENST00000396682 DNAJB2P25686 324 aa15.75■□□□□ 0.11
RPA3-202ENST00000396682 NOVP48745 357 aa15.75■□□□□ 0.11
RPA3-202ENST00000396682 VPS53Q5VIR6 699 aa15.75■□□□□ 0.11
RPA3-202ENST00000396682 CHURC1Q8WUH1 139 aa15.75■□□□□ 0.11
RPA3-202ENST00000396682 TRERF1Q96PN7 1200 aa15.75■□□□□ 0.11
RPA3-202ENST00000396682 SPC25Q9HBM1 224 aa15.75■□□□□ 0.11
RPA3-202ENST00000396682 PRR12Q9ULL5 1215 aa15.75■□□□□ 0.11
RPA3-202ENST00000396682 GNEQ9Y223 722 aaKnown RBP15.75■□□□□ 0.11
RPA3-202ENST00000396682 MUC3AQ02505 3323 aa15.74■□□□□ 0.11
RPA3-202ENST00000396682 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.74■□□□□ 0.11
RPA3-202ENST00000396682 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.74■□□□□ 0.11
RPA3-202ENST00000396682 ALAS1P13196 640 aa15.74■□□□□ 0.11
RPA3-202ENST00000396682 CSF2RAP15509 400 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms