RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 PDHBP11177 359 aa13.03□□□□□ -0.32
NDUFA9-202ENST00000396655 CYBAP13498 195 aa13.03□□□□□ -0.32
NDUFA9-202ENST00000396655 TRDNQ13061 729 aa13.03□□□□□ -0.32
NDUFA9-202ENST00000396655 IKQ13123 557 aaPredicted RBP13.03□□□□□ -0.32
NDUFA9-202ENST00000396655 MAMDC4Q6UXC1 1216 aa13.03□□□□□ -0.32
NDUFA9-202ENST00000396655 KCTD1Q719H9 257 aa13.03□□□□□ -0.32
NDUFA9-202ENST00000396655 CPXCR1Q8N123 301 aa13.03□□□□□ -0.32
NDUFA9-202ENST00000396655 DDX11Q96FC9 970 aa13.03□□□□□ -0.32
NDUFA9-202ENST00000396655 ZSCAN10Q96SZ4 725 aaPredicted RBP13.03□□□□□ -0.32
NDUFA9-202ENST00000396655 TINF2Q9BSI4 451 aa13.03□□□□□ -0.32
NDUFA9-202ENST00000396655 MAF1Q9H063 256 aa13.03□□□□□ -0.32
NDUFA9-202ENST00000396655 RAVER2Q9HCJ3 691 aaKnown RBP13.03□□□□□ -0.32
NDUFA9-202ENST00000396655 RIPK3Q9Y572 518 aa13.03□□□□□ -0.32
NDUFA9-202ENST00000396655 ZNF536O15090 1300 aa13.03□□□□□ -0.32
NDUFA9-202ENST00000396655 DNAH12Q6ZR08 3092 aa13.02□□□□□ -0.32
NDUFA9-202ENST00000396655 DLL1O00548 723 aa13.02□□□□□ -0.33
NDUFA9-202ENST00000396655 SEPT4O43236 478 aa13.02□□□□□ -0.33
NDUFA9-202ENST00000396655 CCND3P30281 292 aaPredicted RBP13.02□□□□□ -0.33
NDUFA9-202ENST00000396655 CYP2C19P33261 490 aa13.02□□□□□ -0.33
NDUFA9-202ENST00000396655 ZNF543Q08ER8 600 aa13.02□□□□□ -0.33
NDUFA9-202ENST00000396655 RANBP17Q9H2T7 1088 aaKnown RBP13.02□□□□□ -0.33
NDUFA9-202ENST00000396655 DDX20Q9UHI6 824 aaKnown RBP13.02□□□□□ -0.33
NDUFA9-202ENST00000396655 SYNGAP1Q96PV0 1343 aa13.02□□□□□ -0.33
NDUFA9-202ENST00000396655 B4E1Z4 1266 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 ICAM1P05362 532 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 PGK2P07205 417 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 CYP21A2P08686 494 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 PTH1RQ03431 593 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 CCDC96Q2M329 555 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 SYDE2Q5VT97 1194 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 ERICH6BQ5W0A0 696 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 KIAA1211Q6ZU35 1233 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 ANKRD35Q8N283 1001 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 ENAHQ8N8S7 591 aaPredicted RBP13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 ARRDC4Q8NCT1 418 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 PNMA1Q8ND90 353 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 PAWRQ96IZ0 340 aaKnown RBP13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 CCDC136Q96JN2 1154 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 UBAC1Q9BSL1 405 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 MTA3Q9BTC8 594 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 ACAD9Q9H845 621 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 KAT14Q9H8E8 782 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 ISY1Q9ULR0 285 aaKnown RBP13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 NR2E3Q9Y5X4 410 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 PFASO15067 1338 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 PLXNA1Q9UIW2 1896 aa13.01□□□□□ -0.33
NDUFA9-202ENST00000396655 LAMA3Q16787 3333 aa13□□□□□ -0.33
NDUFA9-202ENST00000396655 COL6A1P12109 1028 aa13□□□□□ -0.33
NDUFA9-202ENST00000396655 TRPV1Q8NER1 839 aa13□□□□□ -0.33
NDUFA9-202ENST00000396655 SPDYE1Q8NFV5 336 aaPredicted RBP13□□□□□ -0.33
NDUFA9-202ENST00000396655 AGBL1Q96MI9 1066 aa13□□□□□ -0.33
NDUFA9-202ENST00000396655 TRERF1Q96PN7 1200 aa13□□□□□ -0.33
NDUFA9-202ENST00000396655 TNKSO95271 1327 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 WDR19Q8NEZ3 1342 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 LOC102724159A0A0B4J2E5 919 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 PITPNM1O00562 1244 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 NEFLP07196 543 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 CNGA1P29973 690 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 PWP2Q15269 919 aaKnown RBP12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 SEC23AQ15436 765 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 ASPRV1Q53RT3 343 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 TTBK2Q6IQ55 1244 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 FAM133AQ8N9E0 248 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 NCOA7Q8NI08 942 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 DPF3Q92784 378 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 ZKSCAN3Q9BRR0 538 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 ESYT1Q9BSJ8 1104 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 RNF146Q9NTX7 359 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 CNPY2Q9Y2B0 182 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 SMCHD1A6NHR9 2005 aa12.99□□□□□ -0.33
NDUFA9-202ENST00000396655 E7EWF7 191 aa12.98□□□□□ -0.33
NDUFA9-202ENST00000396655 DNM1LO00429 736 aa12.98□□□□□ -0.33
NDUFA9-202ENST00000396655 SART3Q15020 963 aaKnown RBP12.98□□□□□ -0.33
NDUFA9-202ENST00000396655 IFIT1BQ5T764 474 aaKnown RBP12.98□□□□□ -0.33
NDUFA9-202ENST00000396655 CASC1Q6TDU7 716 aa12.98□□□□□ -0.33
NDUFA9-202ENST00000396655 RALYLQ86SE5 291 aaKnown RBP12.98□□□□□ -0.33
NDUFA9-202ENST00000396655 RGS22Q8NE09 1264 aa12.98□□□□□ -0.33
NDUFA9-202ENST00000396655 LSG1Q9H089 658 aaKnown RBP12.98□□□□□ -0.33
NDUFA9-202ENST00000396655 ABHD16BQ9H3Z7 469 aa12.98□□□□□ -0.33
NDUFA9-202ENST00000396655 C11orf49Q9H6J7 331 aa12.98□□□□□ -0.33
NDUFA9-202ENST00000396655 GPCPD1Q9NPB8 672 aa12.98□□□□□ -0.33
NDUFA9-202ENST00000396655 A1CFQ9NQ94 594 aaKnown RBP12.98□□□□□ -0.33
NDUFA9-202ENST00000396655 CCPG1Q9ULG6 757 aa12.98□□□□□ -0.33
NDUFA9-202ENST00000396655 RBM8AQ9Y5S9 174 aaKnown RBP12.98□□□□□ -0.33
NDUFA9-202ENST00000396655 ERICH2A1L162 156 aa12.97□□□□□ -0.33
NDUFA9-202ENST00000396655 ASB14A6NK59 587 aa12.97□□□□□ -0.33
NDUFA9-202ENST00000396655 POTEB2H3BUK9 544 aa12.97□□□□□ -0.33
NDUFA9-202ENST00000396655 EVI5O60447 810 aa12.97□□□□□ -0.33
NDUFA9-202ENST00000396655 ZNF865P0CJ78 1059 aaPredicted RBP12.97□□□□□ -0.33
NDUFA9-202ENST00000396655 ALAS1P13196 640 aa12.97□□□□□ -0.33
NDUFA9-202ENST00000396655 SLC16A2P36021 539 aa12.97□□□□□ -0.33
NDUFA9-202ENST00000396655 SLC4A3P48751 1232 aa12.97□□□□□ -0.33
NDUFA9-202ENST00000396655 TMTC2Q8N394 836 aa12.97□□□□□ -0.33
NDUFA9-202ENST00000396655 CYP39A1Q9NYL5 469 aa12.97□□□□□ -0.33
NDUFA9-202ENST00000396655 MTMR7Q9Y216 660 aa12.97□□□□□ -0.33
NDUFA9-202ENST00000396655 FRMPD2Q68DX3 1309 aaPredicted RBP12.96□□□□□ -0.33
NDUFA9-202ENST00000396655 H0YGN5 161 aa12.96□□□□□ -0.33
NDUFA9-202ENST00000396655 SNAI1O95863 264 aaPredicted RBP12.96□□□□□ -0.33
NDUFA9-202ENST00000396655 PARP1P09874 1014 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms