RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 ACAD9Q9H845 621 aa19.35■□□□□ 0.69
CLTA-203ENST00000396603 RAVER2Q9HCJ3 691 aaKnown RBP19.35■□□□□ 0.69
CLTA-203ENST00000396603 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.35■□□□□ 0.69
CLTA-203ENST00000396603 MYH4Q9Y623 1939 aa19.35■□□□□ 0.69
CLTA-203ENST00000396603 A0A0C4DFX4 3053 aa19.35■□□□□ 0.69
CLTA-203ENST00000396603 RAG1P15918 1043 aa19.34■□□□□ 0.69
CLTA-203ENST00000396603 GJA9P57773 515 aa19.34■□□□□ 0.69
CLTA-203ENST00000396603 TFAP4Q01664 338 aa19.34■□□□□ 0.69
CLTA-203ENST00000396603 C9orf50Q5SZB4 431 aa19.34■□□□□ 0.69
CLTA-203ENST00000396603 LRRC47Q8N1G4 583 aaKnown RBP19.34■□□□□ 0.69
CLTA-203ENST00000396603 STAG1Q8WVM7 1258 aa19.34■□□□□ 0.69
CLTA-203ENST00000396603 GLT1D1Q96MS3 346 aa19.34■□□□□ 0.69
CLTA-203ENST00000396603 ZHX1Q9UKY1 873 aaPredicted RBP19.34■□□□□ 0.69
CLTA-203ENST00000396603 SALL3Q9BXA9 1300 aa19.33■□□□□ 0.69
CLTA-203ENST00000396603 SLC1A4P43007 532 aa19.33■□□□□ 0.68
CLTA-203ENST00000396603 FGD4Q96M96 766 aa19.33■□□□□ 0.68
CLTA-203ENST00000396603 SEC62Q99442 399 aaKnown RBP19.33■□□□□ 0.68
CLTA-203ENST00000396603 TMEM39AQ9NV64 488 aa19.33■□□□□ 0.68
CLTA-203ENST00000396603 ANAPC4Q9UJX5 808 aa19.33■□□□□ 0.68
CLTA-203ENST00000396603 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.33■□□□□ 0.68
CLTA-203ENST00000396603 PCDHB15Q9Y5E8 787 aa19.33■□□□□ 0.68
CLTA-203ENST00000396603 TMEM232C9JQI7 657 aa19.32■□□□□ 0.68
CLTA-203ENST00000396603 PQBP1O60828 265 aaKnown RBP19.32■□□□□ 0.68
CLTA-203ENST00000396603 NOVP48745 357 aa19.32■□□□□ 0.68
CLTA-203ENST00000396603 FPGSQ05932 587 aa19.32■□□□□ 0.68
CLTA-203ENST00000396603 FAAP100Q0VG06 881 aa19.32■□□□□ 0.68
CLTA-203ENST00000396603 KCNA10Q16322 511 aa19.32■□□□□ 0.68
CLTA-203ENST00000396603 ARMCX2Q7L311 632 aa19.32■□□□□ 0.68
CLTA-203ENST00000396603 FAM133AQ8N9E0 248 aa19.32■□□□□ 0.68
CLTA-203ENST00000396603 SEZ6LQ9BYH1 1024 aa19.32■□□□□ 0.68
CLTA-203ENST00000396603 SMCHD1A6NHR9 2005 aa19.32■□□□□ 0.68
CLTA-203ENST00000396603 ASB14A6NK59 587 aa19.31■□□□□ 0.68
CLTA-203ENST00000396603 ITGB8P26012 769 aa19.31■□□□□ 0.68
CLTA-203ENST00000396603 CDK7P50613 346 aa19.31■□□□□ 0.68
CLTA-203ENST00000396603 CCDC144BQ3MJ40 725 aa19.31■□□□□ 0.68
CLTA-203ENST00000396603 CCDC174Q6PII3 467 aa19.31■□□□□ 0.68
CLTA-203ENST00000396603 LENG1Q96BZ8 264 aaPredicted RBP19.31■□□□□ 0.68
CLTA-203ENST00000396603 EVI5LQ96CN4 794 aa19.31■□□□□ 0.68
CLTA-203ENST00000396603 KATNBL1Q9H079 304 aa19.31■□□□□ 0.68
CLTA-203ENST00000396603 SEMA6BQ9H3T3 888 aa19.31■□□□□ 0.68
CLTA-203ENST00000396603 ZBTB47Q9UFB7 747 aaPredicted RBP19.31■□□□□ 0.68
CLTA-203ENST00000396603 TBX21Q9UL17 535 aa19.31■□□□□ 0.68
CLTA-203ENST00000396603 ZNF536O15090 1300 aa19.3■□□□□ 0.68
CLTA-203ENST00000396603 TSPY2A6NKD2 308 aa19.3■□□□□ 0.68
CLTA-203ENST00000396603 TIMP1P01033 207 aa19.3■□□□□ 0.68
CLTA-203ENST00000396603 FGRP09769 529 aa19.3■□□□□ 0.68
CLTA-203ENST00000396603 C6orf222P0C671 652 aaPredicted RBP19.3■□□□□ 0.68
CLTA-203ENST00000396603 ALX1Q15699 326 aa19.3■□□□□ 0.68
CLTA-203ENST00000396603 RCSD1Q6JBY9 416 aa19.3■□□□□ 0.68
CLTA-203ENST00000396603 CCDC144CPQ8IYA2 1237 aa19.3■□□□□ 0.68
CLTA-203ENST00000396603 RNPC3Q96LT9 517 aaKnown RBP19.3■□□□□ 0.68
CLTA-203ENST00000396603 A1CFQ9NQ94 594 aaKnown RBP19.3■□□□□ 0.68
CLTA-203ENST00000396603 STX8Q9UNK0 236 aa19.3■□□□□ 0.68
CLTA-203ENST00000396603 ZMYM6O95789 1325 aa19.29■□□□□ 0.68
CLTA-203ENST00000396603 LOC102724159A0A0B4J2E5 919 aa19.29■□□□□ 0.68
CLTA-203ENST00000396603 A0A0U1RQG5 324 aaPredicted RBP19.29■□□□□ 0.68
CLTA-203ENST00000396603 ORC4O43929 436 aa19.29■□□□□ 0.68
CLTA-203ENST00000396603 CABYRO75952 493 aa19.29■□□□□ 0.68
CLTA-203ENST00000396603 ASGR1P07306 291 aa19.29■□□□□ 0.68
CLTA-203ENST00000396603 PWP2Q15269 919 aaKnown RBP19.29■□□□□ 0.68
CLTA-203ENST00000396603 MFSD5Q6N075 450 aa19.29■□□□□ 0.68
CLTA-203ENST00000396603 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.29■□□□□ 0.68
CLTA-203ENST00000396603 CDX2Q99626 313 aaPredicted RBP19.29■□□□□ 0.68
CLTA-203ENST00000396603 HELLSQ9NRZ9 838 aa19.29■□□□□ 0.68
CLTA-203ENST00000396603 RNF146Q9NTX7 359 aa19.29■□□□□ 0.68
CLTA-203ENST00000396603 UNC80Q8N2C7 3258 aa19.29■□□□□ 0.68
CLTA-203ENST00000396603 ARVCFO00192 962 aa19.28■□□□□ 0.68
CLTA-203ENST00000396603 FOXP2O15409 715 aa19.28■□□□□ 0.68
CLTA-203ENST00000396603 SLC4A3P48751 1232 aa19.28■□□□□ 0.68
CLTA-203ENST00000396603 IKQ13123 557 aaPredicted RBP19.28■□□□□ 0.68
CLTA-203ENST00000396603 CCDC129Q6ZRS4 1044 aa19.28■□□□□ 0.68
CLTA-203ENST00000396603 OTUD7AQ8TE49 926 aaPredicted RBP19.28■□□□□ 0.68
CLTA-203ENST00000396603 DCAF4Q8WV16 495 aa19.28■□□□□ 0.68
CLTA-203ENST00000396603 IL17RBQ9NRM6 502 aa19.28■□□□□ 0.68
CLTA-203ENST00000396603 PNMA2Q9UL42 364 aa19.28■□□□□ 0.68
CLTA-203ENST00000396603 Q9Y3F1 56 aa19.28■□□□□ 0.68
CLTA-203ENST00000396603 MYADML2A6NDP7 307 aa19.27■□□□□ 0.68
CLTA-203ENST00000396603 TLR3O15455 904 aaKnown RBP19.27■□□□□ 0.68
CLTA-203ENST00000396603 ADCY6O43306 1168 aa19.27■□□□□ 0.68
CLTA-203ENST00000396603 MCCP23508 829 aa19.27■□□□□ 0.68
CLTA-203ENST00000396603 NT5C2P49902 561 aa19.27■□□□□ 0.68
CLTA-203ENST00000396603 PPIGQ13427 754 aaKnown RBP eCLIP19.27■□□□□ 0.68
CLTA-203ENST00000396603 GNASQ5JWF2 1037 aa19.27■□□□□ 0.68
CLTA-203ENST00000396603 TRERF1Q96PN7 1200 aa19.27■□□□□ 0.68
CLTA-203ENST00000396603 HOMER2Q9NSB8 354 aa19.27■□□□□ 0.68
CLTA-203ENST00000396603 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.26■□□□□ 0.67
CLTA-203ENST00000396603 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.26■□□□□ 0.67
CLTA-203ENST00000396603 ICAM1P05362 532 aa19.26■□□□□ 0.67
CLTA-203ENST00000396603 PCP11498 1178 aaKnown RBP19.26■□□□□ 0.67
CLTA-203ENST00000396603 EPHB4P54760 987 aa19.26■□□□□ 0.67
CLTA-203ENST00000396603 CNTN2Q02246 1040 aa19.26■□□□□ 0.67
CLTA-203ENST00000396603 TNFAIP2Q03169 654 aa19.26■□□□□ 0.67
CLTA-203ENST00000396603 HDAC1Q13547 482 aaPredicted RBP19.26■□□□□ 0.67
CLTA-203ENST00000396603 BTNL9Q6UXG8 535 aa19.26■□□□□ 0.67
CLTA-203ENST00000396603 FAM126BQ8IXS8 530 aa19.26■□□□□ 0.67
CLTA-203ENST00000396603 EXOC6Q8TAG9 804 aa19.26■□□□□ 0.67
CLTA-203ENST00000396603 MORC4Q8TE76 937 aa19.26■□□□□ 0.67
CLTA-203ENST00000396603 AGBL1Q96MI9 1066 aa19.26■□□□□ 0.67
CLTA-203ENST00000396603 FAM161BQ96MY7 647 aa19.26■□□□□ 0.67
CLTA-203ENST00000396603 TTYH1Q9H313 450 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms