RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ARL8AQ96BM9 186 aa11.02□□□□□ -0.65
TRIM39-203ENST00000396547 TRIM47Q96LD4 638 aa11.02□□□□□ -0.65
TRIM39-203ENST00000396547 GSDMAQ96QA5 445 aa11.02□□□□□ -0.65
TRIM39-203ENST00000396547 BCORQ6W2J9 1755 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 KRT86O43790 486 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 TUBBP07437 444 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 EN1Q05925 392 aaPredicted RBP11.01□□□□□ -0.65
TRIM39-203ENST00000396547 SF3A3Q12874 501 aaKnown RBP eCLIP11.01□□□□□ -0.65
TRIM39-203ENST00000396547 TXNRD1Q16881 649 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 PIK3AP1Q6ZUJ8 805 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 DEFB132Q7Z7B7 95 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 IFT81Q8WYA0 676 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 HAUS4Q9H6D7 363 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 BRMS1Q9HCU9 246 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 ZNHIT6Q9NWK9 470 aaKnown RBP11.01□□□□□ -0.65
TRIM39-203ENST00000396547 KIAA0754O94854 1291 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 PLEKHA8P1O95397 391 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 XBP1P17861 261 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 MCM3P25205 808 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 KRT2P35908 639 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 CCDC181Q5TID7 509 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 SGMS1Q86VZ5 419 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 SDR42E1Q8WUS8 393 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 JPH2Q9BR39 696 aaPredicted RBP11.01□□□□□ -0.65
TRIM39-203ENST00000396547 MAGEC2Q9UBF1 373 aaPredicted RBP11.01□□□□□ -0.65
TRIM39-203ENST00000396547 MYH8P13535 1937 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 NRXN2Q9P2S2 1712 aa11.01□□□□□ -0.65
TRIM39-203ENST00000396547 PATL2C9JE40 543 aaKnown RBP11□□□□□ -0.65
TRIM39-203ENST00000396547 ATP2B2Q01814 1243 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 TTC38Q5R3I4 469 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 OTUD6BQ8N6M0 293 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 ZNF579Q8NAF0 562 aaKnown RBP11□□□□□ -0.65
TRIM39-203ENST00000396547 SPATA20Q8TB22 786 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 MLXIPQ9HAP2 919 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 AATFQ9NY61 560 aaKnown RBP eCLIP11□□□□□ -0.65
TRIM39-203ENST00000396547 XDHP47989 1333 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 CYP2D7A0A087X1C5 515 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 RGL2O15211 777 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 KCNQ2O43526 872 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 ATP2C2O75185 946 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 SSBP05455 408 aaKnown RBP eCLIP11□□□□□ -0.65
TRIM39-203ENST00000396547 LIFRP42702 1097 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 PMS1P54277 932 aaKnown RBP11□□□□□ -0.65
TRIM39-203ENST00000396547 CKAP4Q07065 602 aaKnown RBP11□□□□□ -0.65
TRIM39-203ENST00000396547 RC3H1Q5TC82 1133 aaKnown RBP11□□□□□ -0.65
TRIM39-203ENST00000396547 GEMIN8Q9NWZ8 242 aaKnown RBP11□□□□□ -0.65
TRIM39-203ENST00000396547 MYO1AQ9UBC5 1043 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 LRWD1Q9UFC0 647 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 ABCF2Q9UG63 623 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 SCN7AQ01118 1682 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 CCDC196A0A1B0GTZ2 297 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 ESYT3A0FGR9 886 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 NCK2O43639 380 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 PLEKP08567 350 aaPredicted RBP11□□□□□ -0.65
TRIM39-203ENST00000396547 MAP2K2P36507 400 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 AARSP49588 968 aaKnown RBP eCLIP11□□□□□ -0.65
TRIM39-203ENST00000396547 EP400NLQ6ZTU2 488 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 CCDC91Q7Z6B0 441 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 LCORLQ8N3X6 602 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 SHISA4Q96DD7 197 aa11□□□□□ -0.65
TRIM39-203ENST00000396547 LIMA1Q9UHB6 759 aaKnown RBP11□□□□□ -0.65
TRIM39-203ENST00000396547 PP2D1A8MPX8 630 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 MOCS3O95396 460 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 KRT14P02533 472 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 RPN1P04843 607 aaKnown RBP10.99□□□□□ -0.65
TRIM39-203ENST00000396547 GUCY2FP51841 1108 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 NLRP5P59047 1200 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 TBC1D8BQ0IIM8 1120 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 KIF5AQ12840 1032 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 PPFIA1Q13136 1202 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 ENOX2Q16206 610 aaKnown RBP10.99□□□□□ -0.65
TRIM39-203ENST00000396547 PTF1AQ7RTS3 328 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 MB21D1Q8N884 522 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 TTLL11Q8NHH1 800 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.99□□□□□ -0.65
TRIM39-203ENST00000396547 KRT23Q9C075 422 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 VIPAS39Q9H9C1 493 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 NHEJ1Q9H9Q4 299 aaPredicted RBP10.99□□□□□ -0.65
TRIM39-203ENST00000396547 STAT6P42226 847 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 MTIF2P46199 727 aaKnown RBP10.99□□□□□ -0.65
TRIM39-203ENST00000396547 KRT83P78385 493 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 SETQ01105 290 aaPredicted RBP10.99□□□□□ -0.65
TRIM39-203ENST00000396547 APBA1Q02410 837 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 SPAG1Q07617 926 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 FAM182BQ5T319 152 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 TYW1BQ6NUM6 668 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 NFRKBQ6P4R8 1299 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 WDR59Q6PJI9 974 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 TSEN2Q8NCE0 465 aaKnown RBP10.99□□□□□ -0.65
TRIM39-203ENST00000396547 MTRQ99707 1265 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 YY1AP1Q9H869 796 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 LRP2BPQ9P2M1 347 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 WDR19Q8NEZ3 1342 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 CNTNAP4Q9C0A0 1308 aa10.99□□□□□ -0.65
TRIM39-203ENST00000396547 GSG1L2A8MUP6 293 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 PSMD14O00487 310 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 HSF2BPO75031 334 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 CYLC1P35663 651 aaPredicted RBP10.98□□□□□ -0.65
TRIM39-203ENST00000396547 GUCY1A3Q02108 690 aa10.98□□□□□ -0.65
TRIM39-203ENST00000396547 MAP3K12Q12852 859 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms