RNA–Protein interactions for RNA: ENST00000396251.1

XIRP1-202, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene XIRP1, Length 6,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-202ENST00000396251 USP17L18D6R9N7 530 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 USP17L22D6RA61 530 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 USP17L17D6RBQ6 530 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 USP17L19D6RCP7 530 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 USP17L20D6RJB6 530 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 CYP27B1O15528 508 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 CRCPO75575 148 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 VIMP08670 466 aaKnown RBP13.37□□□□□ -0.27
XIRP1-202ENST00000396251 FCGRTP55899 365 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 USP17L24Q0WX57 530 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 ANKFY1Q9P2R3 1169 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 PFDN6O15212 129 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 ACTN1P12814 892 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 NFKBIAP25963 317 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 CD209Q9NNX6 404 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.37□□□□□ -0.27
XIRP1-202ENST00000396251 SPDYE16A6NNV3 312 aaPredicted RBP13.37□□□□□ -0.27
XIRP1-202ENST00000396251 CCDC175P0C221 793 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 SPDYE2Q495Y8 402 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 DYMQ7RTS9 669 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 DAAM2Q86T65 1068 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 INTS4Q96HW7 963 aaKnown RBP13.37□□□□□ -0.27
XIRP1-202ENST00000396251 PTCH1Q13635 1447 aa13.37□□□□□ -0.27
XIRP1-202ENST00000396251 SHTN1A0MZ66 631 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 DPEP1P16444 411 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 COL4A3BPQ9Y5P4 624 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 NDUFB9Q9Y6M9 179 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 PNMA6EA0A0J9YXQ4 647 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 ZNF233A6NK53 670 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 GIPC1O14908 333 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 GH2P01242 217 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 FAM178BQ8IXR5 827 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 VPS54Q9P1Q0 977 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 SHROOM2Q13796 1616 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 PRAMEF22A3QJZ6 481 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 SCG2P13521 617 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 ERCC5P28715 1186 aaPredicted RBP13.36□□□□□ -0.27
XIRP1-202ENST00000396251 STX17P56962 302 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 TGFB2P61812 414 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 CUL4BQ13620 913 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 PLCB4Q15147 1175 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 DPF3Q92784 378 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 PHLPP2Q6ZVD8 1323 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 E7EWF7 191 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 CUTAO60888 179 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 CEP128Q6ZU80 1094 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 NUDT18Q6ZVK8 323 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 YAF2Q8IY57 180 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 TCP11Q8WWU5 503 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 GPR101Q96P66 508 aaPredicted RBP13.36□□□□□ -0.27
XIRP1-202ENST00000396251 PUS3Q9BZE2 481 aaKnown RBP13.36□□□□□ -0.27
XIRP1-202ENST00000396251 FAM49AQ9H0Q0 323 aaPredicted RBP13.36□□□□□ -0.27
XIRP1-202ENST00000396251 MED23Q9ULK4 1368 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 KRT86O43790 486 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 C16orf45Q96MC5 204 aaPredicted RBP13.36□□□□□ -0.27
XIRP1-202ENST00000396251 C1orf112Q9NSG2 853 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 TNNQ9UQP3 1299 aa13.36□□□□□ -0.27
XIRP1-202ENST00000396251 GNA14O95837 355 aa13.35□□□□□ -0.27
XIRP1-202ENST00000396251 CYP19A1P11511 503 aaPredicted RBP13.35□□□□□ -0.27
XIRP1-202ENST00000396251 ANO1Q5XXA6 986 aa13.35□□□□□ -0.27
XIRP1-202ENST00000396251 FANCBQ8NB91 859 aa13.35□□□□□ -0.27
XIRP1-202ENST00000396251 RAD51AP2Q09MP3 1159 aa13.35□□□□□ -0.27
XIRP1-202ENST00000396251 SPP2Q13103 211 aa13.35□□□□□ -0.27
XIRP1-202ENST00000396251 PDXDC2PQ6P474 469 aa13.35□□□□□ -0.27
XIRP1-202ENST00000396251 DCAF4Q8WV16 495 aa13.35□□□□□ -0.27
XIRP1-202ENST00000396251 CATSPER4Q7RTX7 472 aa13.35□□□□□ -0.27
XIRP1-202ENST00000396251 TRIM50Q86XT4 487 aa13.35□□□□□ -0.27
XIRP1-202ENST00000396251 LUC7L2Q9Y383 392 aaKnown RBP13.35□□□□□ -0.27
XIRP1-202ENST00000396251 TTLL3Q9Y4R7 772 aa13.35□□□□□ -0.27
XIRP1-202ENST00000396251 ADCY10Q96PN6 1610 aa13.35□□□□□ -0.27
XIRP1-202ENST00000396251 ALDH1A1P00352 501 aa13.35□□□□□ -0.27
XIRP1-202ENST00000396251 DIXDC1Q155Q3 683 aa13.35□□□□□ -0.27
XIRP1-202ENST00000396251 SNRNP48Q6IEG0 339 aaKnown RBP13.35□□□□□ -0.27
XIRP1-202ENST00000396251 TBC1D7Q9P0N9 293 aa13.35□□□□□ -0.27
XIRP1-202ENST00000396251 ADCY5O95622 1261 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 TTC30AQ86WT1 665 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 SUGT1Q9Y2Z0 365 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 PTGS1P23219 599 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 TRMT2AQ8IZ69 625 aaKnown RBP13.34□□□□□ -0.27
XIRP1-202ENST00000396251 CEP170P1Q96L14 293 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 HSPD1P10809 573 aaKnown RBP13.34□□□□□ -0.27
XIRP1-202ENST00000396251 PPP1R7Q15435 360 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 ASIC2Q16515 512 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 MUM1L1Q5H9M0 696 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 THEM5Q8N1Q8 247 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 CLASP1Q7Z460 1538 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 PRDM15P57071 1507 aaPredicted RBP13.34□□□□□ -0.27
XIRP1-202ENST00000396251 GCFC2P16383 781 aaKnown RBP13.34□□□□□ -0.27
XIRP1-202ENST00000396251 KRT40Q6A162 431 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 CSGALNACT2Q8N6G5 542 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 SSH3Q8TE77 659 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 PHKBQ93100 1093 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 GOLGA8CPA6NN73 597 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 OR52Z1P0C646 297 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 MECOMQ03112 1051 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 NEDD9Q14511 834 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 DSTYKQ6XUX3 929 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 USP44Q9H0E7 712 aa13.34□□□□□ -0.27
XIRP1-202ENST00000396251 POLR3GO15318 223 aaPredicted RBP13.33□□□□□ -0.27
XIRP1-202ENST00000396251 DYNLL1P63167 89 aaKnown RBP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms